CSPI05G16460 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGAACAATTTCTCAAATTGTACACTGTAGCAAATGTAGAACAGCGCTCCATTTTGGCGGTTCGCTTCAGAGTTGAGGAGAGATTTTGTGCAATCTTAACTTTCAAGTTCTTGAAATCCATGGATATGGAAATTGATGCTTCCAAAGATGTTTGTTTAATCAAAGACGATGATCTTTTCAAAGCCGCAGAGACCGGCGACTCTTCCGTTTTCACTGACCTCACACCACATCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGACGATCGCTCTCTTCTCCACGTTGCCGTCTCTTCAGGCCACGCCGATGTTAGTCATTACCTAACTTTTCTTCGAAGTAGAGAATTTCGAAATGAAAAAGCCTTTTCCCATGGTTTTTCTTTTGTTTGTTTTTGGCATTGTTCTTATTATTTAAAAAGGACCCATCATCTTGTCAACTTGAAATTTGGATGTCTGTTGGTCTTATTTATACATTATTGAAATTCTTCGTAATGCACCAGGTTGTAAAGATACTGGTTACTGCTGATCAGTCTACAAAGGTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGCGGTCTGACATTTTAGATATCTTGTTGAGCAGAGGTTAGCGAGTTCTTTAATTGTCTGATATTCGTTCCATCTGTATGCTTTTGTGATGATTTTAGTCGTCTAGGTTATGAACAAAGCTAAGTTGTTTAGCGTAGGGATGGATCTTACTTTAGATTCTGTATTGTTGACTGGTGGACGATTGTTGATTAGAAGTTATTAAAAGGGAACCTTGAAGAGCATCACTCTCACCTTCCATCTTCAAGATGCCCATGAAATTTGTTAAAACTATCTCCTGATCAAACTTTATCGTTTTTCTTCTTCTCTTGTTATTATTAGTTTTTTAGGTGTTGATAAAGAATGACTCTCACCCTGTAATTTGTACTTCAACTTTAAATGGATAGTGGAATGAGAAAACATGGGCATTAATGTTTGGAGGATCTTAGTACAATAGAAGGACCTCTTTTGGAGCATTTGGATCTTAGACAATTTTTAAGGCTATCTAGTCCTAGTCTCTAGATTTTCAACAGGGTGATTTTGTAAAGGTGTAATTTTACGTCTTCAATAGTGAAAGTTTGCTAGAGAAGGGGTTCAAAGGGAAATGTAACCTTTTAAGTTAGCGTGAGGGTGAGAAATCTTGTGTGTTAATGGAAGGGGAGAATAGATGACCCTCTTGAATTGCCCTAGTTGATTCTTGTATGGTGCCATAGTAGCCTTCTGTCTACTTGATAGAACATTACTAGTATTTACATGTTATAACGTAAAGAAGAACGAGAGTGTTAGTCCCTCAGTAAACTTATATGTAGTGCTTAAAGTAATTATATCCTCGAAGGGAGGGTTACTTCAAACCCTCACCTCCTGATTTCTTCTGCCATTTTATCTCATTCTTTCTATCTCTCTCATCTCCATCACACAATCTCTTTCACTCTCTTCCAAAATCACACACTCTGCACTCGATTCTACACTCCCAAAGCATCCTTGTAGGTTTTTCTTCCCATTTGAGTGATTTTGTCGTGTTTTCTCAACTTGTGGAGCCTACATTGAAGGCCAAAGGTATCTTCTCTTTTTTTCTCTCAAATTTTTAAGTTTCTCATTTAGATTATAGCTTGAAACCTATGTTGTGCTCTGATTTGGTTGAGTTGTGTGAAAAGGCGGATGAGAATCAAAGTGTTGGAGCTTGGATTGATTTGTTTGATGAGTTTTTATGCTTAATTTGAGTTGAGTTTGGTAAGGCTAGGTGTTTTTTAAGTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGAGTTTTGCTTTCCCTTCCATTTGGTGCCCAGAGTAGCTTTCTTTCCATTACAAGATATCTATGACCCTTAAGAAAAGCAAGGGAAAAACTGTAGCTAGTTCTTCTAAGGCTAATCAACCGAAACCCGACTACAATTAGGAAAGGTTTTCTTCACGTGGTGAGCATGAGAAAGTGTGTCGTTCCTTCGCCATTAAGGTTCTAACCCCATAACAATCCCTTAGGTTAGATGTCGATCTTATTCCCCTAAATCATTACCAAAATACGACATAAAGGGTGGGAATATATGTTGGTAGATCCCGAGGACGTTGTTGTCCCACTAGTCAGGGAGTTCTACATTAACATGGAGGAGCAAAGGAGCGTCTCCCTTGTTAGGGGTGTCATAGTCCCCTTCGACTCGTCGCTCACCAATAGTCTACAGGTTGCCTGACATTGAGAACGACGAATGTGTCCAACTCTTGCAAGGGTTTTTTCCTTTTGACGAAGCAACTAAAGCAATATGTGGTCTAGGGGTAGGTGGTAAACATACCAAGATGCATCCATCCAAATTAGGGGCATAGTTTTGACGGTTACAAACCAGATCTGGCACACTTATTTGTACACATTTCATGCTTGCCATCTGCCTTGCTAAGGTGATGAAGGATACGGCGAAGTTGCTCTACACCTTTTGCACATCTAGGTCTGTTGACGTTGGAAAGGTCTCACTTCGAAAAATAGGTCAGTGCTTTACAACAGGTGGACTTGACCACCCATGTTTGGTCACAGAGTTTTGTCGCCGAGCTGGTGTTGAGATGCACCCGGGTGAGGAAATGGCAAGGCCCAAAGCCCCAATAAGTAGAACGACAATTGCCGCTTTTCGAGGACCATCTGGAATGAGACATCAAGACTGTCACAGAGCTTTGCTCTGTCCATACTCACATGATCACGGTCCCCACACGATGATAACGTGTAAGGGACCTAGTTAGAGATATACGGGTTATTAGAAGAGTATTTGTATAATCAGTAGAAGGGGCATATTAGTAATTAGATAGTAAGTTGGTTAGGGCTTTTAAGTTATGAACAGAGGGTTTGGGTTAGGGGAAAGATGTGAAGTATTTTGTAAGAATTTTACTTTTGGGATTTTTTTTGTCCCCTTTTCAAAAACAAAAATTTTCCTTTTTGGAATTTGGGAGAGATTCTCAGCCTTCTTGAATGTGCTGGGGCATATTAGTAATTAGATAGTTTCTTCTTGATATTACAAGTGATCTTTGTGTGTTCTTGAAATTTGCTTGTTTGGTAGGAACCTAGCATAATGATTCTCACGTGTTCCACTAACCAACTGCCTCCCTGTCATTTGAAATGACTGTCTTCATGGCTTCAATTATTCTCTTCATTGGCTAAATTGATGTAGGGTTAAGGGTGTTTTGAATATTTCTTGTATTTTACCATTTGTATTCCCCTTTTAATATTTTAGAATAGGTGTGACAAAACCCTTCTCCTTTGGGTCTATTGAAAGGAGATAAGATTTAATAGGTGTGACCAAACACTTCTCCTTTGGGTCTATTTAAAGGAGGTTAGGTTTAGTTATCTGGTTAGGTAGTTTAAGTGTGTAACCACCCTTTCCCTTTGGGTCTATTTAAAGGATCAATGTCTTCTTTTTCTCTCATTATTCACAATTAATAAAATTCCTACTCCATGATTCTTCCAAGATTTCTCCAGGGACTCTTTAGTCTTCACCAGAAATACTTAAATATCCAGCAGAGGAACCCCAATATTTCATGTTCCCTTCGTGGTTTTGTACCAGCTAATAGAATGAGGAAGGCAGTAATATTATCTTTCCAACTCCCACTTACAAGCAGTATTGTGTATAAGTTGTTCTGTGTGTCCCCATCACTTCCCCTGTATGTGCTCTATCAAAGATTTCTTGCCCATCATTCTCGTGGCTCATCCTCTCAGAGGCTAGGACTAGGCATGGGCAAAAGGTGAAGGGCAGAGGTAAGCCCAACGGCAGCATCAAAGTTCTTTGGATTTTATAGTACCTTTTCTATTTTGTGTGATATCTTGTTGGAGAGAAATAGAATAGCATTACATGATAAAGATAGAAACTTTTGAGATCTCTTGAGATTTAACTTATTTTCATTTGTTTAATTGGAATCTCTTGATCGAGTTTGTAATTATTATAATTTTTTCTACTTGTTGCCAACTAGCGAGTTTTTTTATTCCTTAGTTTGTGTCAGTTTCTTGCTAGTATATTACCTTCATTCAAGAAAATATTTCCATATCTAATAGTTAGATGTTAAAGTTGAACTTGAAAAAAACAGAAAACTTAAAAGATGCTTTTGGCAGTGTCAAAAGTCCTTCAACAAACTCACTTCATCATGTTTTCATGATATATCGTGTTTGATAACTTCCTTTGCCTTTTGGATAAGATCAAGTGATGATCTATCATGTTTGTGATGAATAGGATTTGTATATTTCTTGAGGTTTCTTTTATTGTTTGAATTCAAAACTTCATTTTATTATATGACAGGAGCCGATGTAAATTTGAAAAATGATGGTGGTCGCACTGCTCTTCATTATGCTTCGAGTAAAGGATGGTTGAAGATTGCTGAAACTCTTATCTCACATGGTGCCAAAATTAATCTAAAAGACAAGGTTTGTCATCTCGAATGTAATATTTTAAATTCCTTAAGCTTTATTTCAATTCAAAATCGAATTTACTTGTACAGCTACAGTTGAAACTATTTTTGTTTGTACTCGCGTATCATCTGATCAACATTGCTCATGGGTGGTAATGAATTGAACAAATTAGGTTGGTTGCACACCGTTGCATCGAGCAGCTAGCACTGGAAACTCAGAATTGTGTGAGTTTCTGATTGAGGAAGGAGCAGAAGTTGATGCTACTGATAAAGCTGGCCAAACACCTCTTATGAACGCAGTAGTTTGCCAAAACAAAGAGGTTATTTTTGCTCCGATAATTTTCTTTGTTTCTTCAACCTTTAATATGTTTTTGGTTTTGTGTTAGTTAGATAAGTTTGTTTCTATCATCTGTTCCACCACACGTTGGTTGTGTATGACATCTTCGTCTGGCTGAAGATGAATGAGGCAATTAATTCTAGTTTTAATAGAAGTGGTGCCAACCTGAGTCTAGTTCAGCTAGTCAAGGCATATGCTCTCAACTTAGAGGTCAAAAGCTCAAATTCCCATTTCCACTTGTTGTCGGACTCAATTTTCTGCAGAAGAGGCATTGTTAGCTGTTTGGGTGAAAGTATTTAGCAATTTGAACTTGTACTCAAGCTAAAACCTGGACGTACAATTATTTTAACACTCTTTGACTTGACTGTTATCTTTTATGATAGAGAGTTTCTAAAGCCACGTATTGGTACTCGGGGGAAAATATGTTATCCAGCAATTCCTTCATATTGTCTTCCTCTATTAATGTTATTTGTTTGAAGTTAAATAAATTACAGATTTCATTCTTGATTCCCTCTTACTGCATCATTTGTAAATGTTTCTGTATTGAGTCTTTAAATGTTAGATAAGGTTATATACATATTTAATCCTTGGGCTATGTTTAGTTATAGTTTTTGTCATTAGCTCTGGTTTGATTTAATGCAGTAGTAACTGTAGGCTGAAGGGAATCTGTTTACAAATGCTTGTGTGTCTGACAGGTTGCTCTTCTTCTAATAAGACATGGAGCTGACGTGAATGTGGAAGATGGGGAAGGTTTCACAGTTCTTGGTAGAGCTTCAATTGAATTGAGGCCAGCACTGATTGATGCTGCCAAAACAATGGTTGAAGGATGATGAATACGACGTCATGTTTAAACCTGTATCCCAAATATCAAGAGCATAGTTCACACCTCTAGTTCAGGAAAAATGTCTTCAGTTCGGGTTCAAGAAATGAAATCAGACCCTTCTCCTTTTCTTTTTCATTTTTTCTTTAATATACTAACTGTGGATGATGTATTGAATGGGGGATGATGAAGTCTACAGCAATTCCCATTAAAAGGACGCAGGGGCTGATGGGAATTTTTTGAAGTTCCATGATATTGTAGTGATCTCTCAATATAAAGGTAGGTTCATAGGTTGAAAATATTTGGATGAGTTAATTGAATTTACCTCAAGACAATGAGATGGTAAAGATTCGACATCTAACCTTTCTATCAAATATGTGATGCTTTGATCTATTTAGTTATATTGAGGTTGGTTA ATGGATATGGAAATTGATGCTTCCAAAGATGTTTGTTTAATCAAAGACGATGATCTTTTCAAAGCCGCAGAGACCGGCGACTCTTCCGTTTTCACTGACCTCACACCACATCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGACGATCGCTCTCTTCTCCACGTTGCCGTCTCTTCAGGCCACGCCGATGTTGTAAAGATACTGGTTACTGCTGATCAGTCTACAAAGGTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGCGGTCTGACATTTTAGATATCTTGTTGAGCAGAGGAGCCGATGTAAATTTGAAAAATGATGGTGGTCGCACTGCTCTTCATTATGCTTCGAGTAAAGGATGGTTGAAGATTGCTGAAACTCTTATCTCACATGGTGCCAAAATTAATCTAAAAGACAAGGTTGGTTGCACACCGTTGCATCGAGCAGCTAGCACTGGAAACTCAGAATTGTGTGAGTTTCTGATTGAGGAAGGAGCAGAAGTTGATGCTACTGATAAAGCTGGCCAAACACCTCTTATGAACGCAGTAGTTTGCCAAAACAAAGAGGTTGCTCTTCTTCTAATAAGACATGGAGCTGACGTGAATGTGGAAGATGGGGAAGGTTTCACAGTTCTTGGTAGAGCTTCAATTGAATTGAGGCCAGCACTGATTGATGCTGCCAAAACAATGGTTGAAGGATGA ATGGATATGGAAATTGATGCTTCCAAAGATGTTTGTTTAATCAAAGACGATGATCTTTTCAAAGCCGCAGAGACCGGCGACTCTTCCGTTTTCACTGACCTCACACCACATCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGACGATCGCTCTCTTCTCCACGTTGCCGTCTCTTCAGGCCACGCCGATGTTGTAAAGATACTGGTTACTGCTGATCAGTCTACAAAGGTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGCGGTCTGACATTTTAGATATCTTGTTGAGCAGAGGAGCCGATGTAAATTTGAAAAATGATGGTGGTCGCACTGCTCTTCATTATGCTTCGAGTAAAGGATGGTTGAAGATTGCTGAAACTCTTATCTCACATGGTGCCAAAATTAATCTAAAAGACAAGGTTGGTTGCACACCGTTGCATCGAGCAGCTAGCACTGGAAACTCAGAATTGTGTGAGTTTCTGATTGAGGAAGGAGCAGAAGTTGATGCTACTGATAAAGCTGGCCAAACACCTCTTATGAACGCAGTAGTTTGCCAAAACAAAGAGGTTGCTCTTCTTCTAATAAGACATGGAGCTGACGTGAATGTGGAAGATGGGGAAGGTTTCACAGTTCTTGGTAGAGCTTCAATTGAATTGAGGCCAGCACTGATTGATGCTGCCAAAACAATGGTTGAAGGATGA
BLAST of CSPI05G16460 vs. Swiss-Prot
Match: PSD10_DICDI (26S proteasome non-ATPase regulatory subunit 10 OS=Dictyostelium discoideum GN=psmD10 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31 Identity = 82/224 (36.61%), Postives = 122/224 (54.46%), Query Frame = 1
BLAST of CSPI05G16460 vs. Swiss-Prot
Match: PSD10_HUMAN (26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens GN=PSMD10 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28 Identity = 81/204 (39.71%), Postives = 113/204 (55.39%), Query Frame = 1
BLAST of CSPI05G16460 vs. Swiss-Prot
Match: PSD10_RAT (26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus GN=Psmd10 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27 Identity = 73/183 (39.89%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of CSPI05G16460 vs. Swiss-Prot
Match: PSD10_MOUSE (26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus GN=Psmd10 PE=1 SV=3) HSP 1 Score: 122.5 bits (306), Expect = 6.5e-27 Identity = 72/183 (39.34%), Postives = 104/183 (56.83%), Query Frame = 1
BLAST of CSPI05G16460 vs. Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3) HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26 Identity = 75/221 (33.94%), Postives = 116/221 (52.49%), Query Frame = 1
BLAST of CSPI05G16460 vs. TrEMBL
Match: A0A0A0KTY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G484670 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 3.1e-129 Identity = 238/243 (97.94%), Postives = 241/243 (99.18%), Query Frame = 1
BLAST of CSPI05G16460 vs. TrEMBL
Match: F6HF69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00840 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 7.6e-99 Identity = 182/243 (74.90%), Postives = 208/243 (85.60%), Query Frame = 1
BLAST of CSPI05G16460 vs. TrEMBL
Match: A0A067KYQ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15679 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 3.2e-97 Identity = 184/242 (76.03%), Postives = 208/242 (85.95%), Query Frame = 1
BLAST of CSPI05G16460 vs. TrEMBL
Match: V4VHF8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032613mg PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 4.1e-97 Identity = 183/243 (75.31%), Postives = 205/243 (84.36%), Query Frame = 1
BLAST of CSPI05G16460 vs. TrEMBL
Match: A0A067H6A7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026440mg PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 4.1e-97 Identity = 183/243 (75.31%), Postives = 205/243 (84.36%), Query Frame = 1
BLAST of CSPI05G16460 vs. TAIR10
Match: AT2G03430.1 (AT2G03430.1 Ankyrin repeat family protein) HSP 1 Score: 331.3 bits (848), Expect = 5.2e-91 Identity = 160/243 (65.84%), Postives = 205/243 (84.36%), Query Frame = 1
BLAST of CSPI05G16460 vs. TAIR10
Match: AT4G19150.1 (AT4G19150.1 Ankyrin repeat family protein) HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 1
BLAST of CSPI05G16460 vs. TAIR10
Match: AT3G04710.1 (AT3G04710.1 ankyrin repeat family protein) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 1
BLAST of CSPI05G16460 vs. TAIR10
Match: AT5G66055.1 (AT5G66055.1 ankyrin repeat protein) HSP 1 Score: 84.7 bits (208), Expect = 8.4e-17 Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 1
BLAST of CSPI05G16460 vs. TAIR10
Match: AT5G37500.1 (AT5G37500.1 gated outwardly-rectifying K+ channel) HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16 Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 1
BLAST of CSPI05G16460 vs. NCBI nr
Match: gi|449452082|ref|XP_004143789.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Cucumis sativus]) HSP 1 Score: 469.2 bits (1206), Expect = 4.5e-129 Identity = 238/243 (97.94%), Postives = 241/243 (99.18%), Query Frame = 1
BLAST of CSPI05G16460 vs. NCBI nr
Match: gi|659131487|ref|XP_008465712.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Cucumis melo]) HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125 Identity = 233/243 (95.88%), Postives = 235/243 (96.71%), Query Frame = 1
BLAST of CSPI05G16460 vs. NCBI nr
Match: gi|359472517|ref|XP_002271979.2| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Vitis vinifera]) HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98 Identity = 182/243 (74.90%), Postives = 208/243 (85.60%), Query Frame = 1
BLAST of CSPI05G16460 vs. NCBI nr
Match: gi|1009154068|ref|XP_015894970.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Ziziphus jujuba]) HSP 1 Score: 365.2 bits (936), Expect = 9.2e-98 Identity = 182/244 (74.59%), Postives = 209/244 (85.66%), Query Frame = 1
BLAST of CSPI05G16460 vs. NCBI nr
Match: gi|802567676|ref|XP_012067741.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Jatropha curcas]) HSP 1 Score: 362.8 bits (930), Expect = 4.6e-97 Identity = 184/242 (76.03%), Postives = 208/242 (85.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|