CSPI05G16080 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G16080
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr5 : 17264940 .. 17265263 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACGGGGTTGGTTTGATTTTGTGAAACAGCCTGAGCCGGCAGTGCTTTCCATTGTTCGTGAATTTTATGCTAATATGGTTGAGGGCAGTTCTCGATCGTTTGTACGTGGTCGTCAGGTTTCCTTCGACTATGGCACAATCATTCGGTACTATCACTTACCTAACTTTGAGCGTGATGAATATGATATCTACGCTAGTGAACATGTGGATGTTCACCAGATCATTCGTGAGCTCTGCCAACCTGGAGCTGAATGGGTTATTAATCCAGGCGAGCCAATTAGATTTAAATCTTCAAACTTGACTGTTTCTAACCAAGTGTAG

mRNA sequence

ATGCAACGGGGTTGGTTTGATTTTGTGAAACAGCCTGAGCCGGCAGTGCTTTCCATTGTTCGTGAATTTTATGCTAATATGGTTGAGGGCAGTTCTCGATCGTTTGTACGTGGTCGTCAGGTTTCCTTCGACTATGGCACAATCATTCGGTACTATCACTTACCTAACTTTGAGCGTGATGAATATGATATCTACGCTAGTGAACATGTGGATGTTCACCAGATCATTCGTGAGCTCTGCCAACCTGGAGCTGAATGGGTTATTAATCCAGGCGAGCCAATTAGATTTAAATCTTCAAACTTGACTGTTTCTAACCAAGTGTAG

Coding sequence (CDS)

ATGCAACGGGGTTGGTTTGATTTTGTGAAACAGCCTGAGCCGGCAGTGCTTTCCATTGTTCGTGAATTTTATGCTAATATGGTTGAGGGCAGTTCTCGATCGTTTGTACGTGGTCGTCAGGTTTCCTTCGACTATGGCACAATCATTCGGTACTATCACTTACCTAACTTTGAGCGTGATGAATATGATATCTACGCTAGTGAACATGTGGATGTTCACCAGATCATTCGTGAGCTCTGCCAACCTGGAGCTGAATGGGTTATTAATCCAGGCGAGCCAATTAGATTTAAATCTTCAAACTTGACTGTTTCTAACCAAGTGTAG

Homology

[Close]

BLAST of CSPI05G16080 vs. TrEMBL
Match: A0A0A0KER1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.0e-55
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 63  MQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 122

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 108
           EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV
Sbjct: 123 EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 169

[Close]

BLAST of CSPI05G16080 vs. TrEMBL
Match: A0A0A0KNI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.6e-43
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 63  MQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 122

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVI 89
           EYDIYASEHVDVHQIIRELCQPGAEW++
Sbjct: 123 EYDIYASEHVDVHQIIRELCQPGAEWLL 150

[Close]

BLAST of CSPI05G16080 vs. TrEMBL
Match: A0A061FAJ6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_032752 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.3e-14
Identity = 43/98 (43.88%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 3   RGWFDFVKQPEPAVLSIVREFYANMVEG-SSRSFVRGRQVSFDYGTIIRYYHLPNFERDE 62
           R W  F  QP   V+ +VREFYA +VE     +FVRG+ V F    I      PN E DE
Sbjct: 60  RYWHQFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDE 119

Query: 63  YDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSS 100
           Y  Y  +H D ++II  LC  GA+W  + GEP+ FK S
Sbjct: 120 YGQYLGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRS 157

[Close]

BLAST of CSPI05G16080 vs. TrEMBL
Match: A5B5G7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026408 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-13
Identity = 37/102 (36.27%), Postives = 60/102 (58.82%), Query Frame = 1


Query: 2    QRGWFDFVKQPEPAVLSIVREFYANMVEGSSRS-FVRGRQVSFDYGTIIRYYHLPNFERD 61
            +R W +F  QP+ A++ +VREFYAN+ E   R  FVRG+QV F    I  +++LP+ E D
Sbjct: 1197 ERKWDNFCAQPQVAIVPVVREFYANVPEHHHRXVFVRGKQVGFSGHAINVFFNLPDIEND 1256

Query: 62   EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLT 103
            +Y  +    +D  +++R +  P  +W +   +P+ F S  LT
Sbjct: 1257 DYTAFLGGEIDYQEVLRTIVVPSTQWKMLDDKPVTFPSIGLT 1298

[Close]

BLAST of CSPI05G16080 vs. TrEMBL
Match: A0A061F5W4_THECC (S-locus lectin protein kinase family protein, putative OS=Theobroma cacao GN=TCM_046867 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-12
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1


Query: 3    RGWFDFVKQPEPAVLSIVREFYANMVEGSSR-SFVRGRQVSFDYGTIIRYYHLPNFERDE 62
            R W +F    E AV+ +VR+FY N  E  +R +F RG++V FD  TI ++ ++P  E DE
Sbjct: 928  RHWKNFSAHLEAAVMPVVRKFYTNAYEHENRVTFCRGKKVPFDSFTINQFSNIPKIENDE 987

Query: 63   YDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNL 102
            Y  Y   +V++ ++I  L  PG +W I+ G  + FK++ L
Sbjct: 988  YAHYTDGNVNLDEVITFLYDPGTQWKISKGISVSFKANTL 1027

[Close]

BLAST of CSPI05G16080 vs. NCBI nr
Match: gi|700191693|gb|KGN46897.1| (hypothetical protein Csa_6G149380 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-55
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 63  MQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 122

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 108
           EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV
Sbjct: 123 EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 169

[Close]

BLAST of CSPI05G16080 vs. NCBI nr
Match: gi|659117563|ref|XP_008458667.1| (PREDICTED: uncharacterized protein LOC103497996 isoform X1 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-53
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAV+SIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 63  MQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 122

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 108
           EY IYASEHVDVHQIIRELCQPGAEW+INPGEPIRFKSSNLTVSNQV
Sbjct: 123 EYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQV 169

[Close]

BLAST of CSPI05G16080 vs. NCBI nr
Match: gi|659117565|ref|XP_008458668.1| (PREDICTED: uncharacterized protein LOC103497996 isoform X2 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-53
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAV+SIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 1   MQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 60

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQV 108
           EY IYASEHVDVHQIIRELCQPGAEW+INPGEPIRFKSSNLTVSNQV
Sbjct: 61  EYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQV 107

[Close]

BLAST of CSPI05G16080 vs. NCBI nr
Match: gi|700195976|gb|KGN51153.1| (hypothetical protein Csa_5G468460 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 84/88 (95.45%), Postives = 86/88 (97.73%), Query Frame = 1


Query: 1   MQRGWFDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTIIRYYHLPNFERD 60
           MQRGW DFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTI RYYHLPNFERD
Sbjct: 63  MQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 122

Query: 61  EYDIYASEHVDVHQIIRELCQPGAEWVI 89
           EYDIYASEHVDVHQIIRELCQPGAEW++
Sbjct: 123 EYDIYASEHVDVHQIIRELCQPGAEWLL 150

[Close]

BLAST of CSPI05G16080 vs. NCBI nr
Match: gi|590612524|ref|XP_007022408.1| (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 85.9 bits (211), Expect = 4.8e-14
Identity = 43/98 (43.88%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 3   RGWFDFVKQPEPAVLSIVREFYANMVEG-SSRSFVRGRQVSFDYGTIIRYYHLPNFERDE 62
           R W  F  QP   V+ +VREFYA +VE     +FVRG+ V F    I      PN E DE
Sbjct: 60  RYWHQFCHQPNVVVVLVVREFYATVVEHVDGVAFVRGKHVPFHSQAINELLRTPNIENDE 119

Query: 63  YDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSS 100
           Y  Y  +H D ++II  LC  GA+W  + GEP+ FK S
Sbjct: 120 YGQYLGDHQDCNEIISTLCIEGAQWKTSHGEPVSFKRS 157

The following BLAST results are available for this feature:

BLAST of CSPI05G16080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G16080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER1_CUCSA	3.0e-55	98.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149380 PE=4 SV=1	[more]
A0A0A0KNI1_CUCSA	7.6e-43	95.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468460 PE=4 SV=1	[more]
A0A061FAJ6_THECC	3.3e-14	43.88	Uncharacterized protein OS=Theobroma cacao GN=TCM_032752 PE=4 SV=1	[more]
A5B5G7_VITVI	2.8e-13	36.27	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026408 PE=4 SV=1	[more]
A0A061F5W4_THECC	4.1e-12	38.00	S-locus lectin protein kinase family protein, putative OS=Theobroma cacao GN=TCM...	[more]

BLAST of CSPI05G16080 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI05G16080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700191693\|gb\|KGN46897.1\|	4.3e-55	98.13	hypothetical protein Csa_6G149380 [Cucumis sativus]	[more]
gi\|659117563\|ref\|XP_008458667.1\|	1.0e-53	95.33	PREDICTED: uncharacterized protein LOC103497996 isoform X1 [Cucumis melo]	[more]
gi\|659117565\|ref\|XP_008458668.1\|	1.0e-53	95.33	PREDICTED: uncharacterized protein LOC103497996 isoform X2 [Cucumis melo]	[more]
gi\|700195976\|gb\|KGN51153.1\|	1.1e-42	95.45	hypothetical protein Csa_5G468460 [Cucumis sativus]	[more]
gi\|590612524\|ref\|XP_007022408.1\|	4.8e-14	43.88	Uncharacterized protein TCM_032752 [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G16080.1	CSPI05G16080.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G16080	Silver-seed gourd	carcpiB0350
CSPI05G16080	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G16080	Watermelon (97103) v2	cpiwmbB430
CSPI05G16080	Wax gourd	cpiwgoB470
CSPI05G16080	Cucumber (Gy14) v1	cgycpiB005
CSPI05G16080	Cucurbita maxima (Rimu)	cmacpiB191
CSPI05G16080	Cucurbita maxima (Rimu)	cmacpiB815
CSPI05G16080	Cucurbita moschata (Rifu)	cmocpiB174
CSPI05G16080	Cucurbita moschata (Rifu)	cmocpiB799
CSPI05G16080	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G16080	Melon (DHL92) v3.5.1	cpimeB350
CSPI05G16080	Watermelon (Charleston Gray)	cpiwcgB358
CSPI05G16080	Watermelon (97103) v1	cpiwmB372
CSPI05G16080	Cucurbita pepo (Zucchini)	cpecpiB835
CSPI05G16080	Bottle gourd (USVL1VR-Ls)	cpilsiB348
CSPI05G16080	Melon (DHL92) v3.6.1	cpimedB340
CSPI05G16080	Cucumber (Gy14) v2	cgybcpiB225