CSPI05G15880 (gene) Wild cucumber (PI 183967)

NameCSPI05G15880
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCytochrome b-c1 complex subunit Rieske, mitochondrial
LocationChr5 : 17015551 .. 17016451 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCTTTTTATGAAAGTCGAGGATAGAAATATTGGTTATGAATCTATTGGCATATTGGAAATGGTTTAGAGGCATGCTTTTCTGGTCGAGCATTCTATAATTTGGTTTTATATCTAATACTAATTATTATAAATAACAATAGTAATCAAAGGCAATTATATGGTTATTGTTTGGAATCTGTCTTTGACAGTTATTGTTTAGAGGTTGTGCATGAGCTTCTCAATTTATAATTTGTGCAATGGAAATGGCTCTGCTAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA

mRNA sequence

ATGGAAATGGCTCTGCTAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA

Coding sequence (CDS)

ATGGAAATGGCTCTGCTAGGTTTTGCTTCTGATGCATTGGCCTCAACCAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCGTTAAGAACCCTTCTTCAAAGATAGTTTATGACGATTACAATCATGAGCGATTTCCTCCAGGTGACCCCAGCAAGCGTGCATTTGCTTATTTTGTATTATCAGGTGGTCGGTTTGTCTACGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTCAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTTGAGGTTGACCTTTCAAGCATCGAACCTGGTTCTACGGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGGCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGATATTGGATCTCTTCGTGACCCACAGCAGGATGAAGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTAGTTGGAGTCTGCACACATCTTGGCTGCATTCCCTTGCCAAATGCTGGTGACTACGGAGGGTGGTTTTGTCCATGCCATGGTTCTCATTACGATGTCTCTGGCAGAATCCGTAAAGGGCCAGCACCCTACAATTTGGAGGTACCTACCTACAGCTTTTTGGAAGGGAACAAGCTTTTGATCGGTTAA
BLAST of CSPI05G15880 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.7e-109
Identity = 184/214 (85.98%), Postives = 204/214 (95.33%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 55  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 114

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 115 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 174

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 175 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 234

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSF+E NKLLIG
Sbjct: 235 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

BLAST of CSPI05G15880 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.7e-109
Identity = 184/214 (85.98%), Postives = 204/214 (95.33%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S++++   D GL+ D+P TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+G
Sbjct: 59  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 118

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 119 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 178

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDI LANSVD+GSLRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 179 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 238

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 239 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

BLAST of CSPI05G15880 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.7e-109
Identity = 186/214 (86.92%), Postives = 204/214 (95.33%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S++++     GL+ D+PATVAA+KNPSSKIVYDD NHER+PPGDPSKRAFAYFVL+G
Sbjct: 52  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 111

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 112 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 171

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           +DDIKLANSVD+G+LRDPQQD ERVK+PEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 172 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 231

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 232 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

BLAST of CSPI05G15880 vs. Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.7e-109
Identity = 184/214 (85.98%), Postives = 204/214 (95.33%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S++++   D GL+ D+P TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+G
Sbjct: 23  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 82

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 83  GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 142

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDI LANSVD+GSLRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 143 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 202

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 203 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

BLAST of CSPI05G15880 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 6.1e-109
Identity = 184/214 (85.98%), Postives = 205/214 (95.79%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S++++   D GL+ D+P TVAA+KNP+SKIVYD++NHER+PPGDPSKRAFAYFVL+G
Sbjct: 45  GFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 104

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 105 GRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 164

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDI LANSVD+GSLRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 165 EDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 224

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 225 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258

BLAST of CSPI05G15880 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.2e-120
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

BLAST of CSPI05G15880 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.9e-112
Identity = 197/214 (92.06%), Postives = 209/214 (97.66%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

BLAST of CSPI05G15880 vs. TrEMBL
Match: A0A060ILM1_PANGI (Ubiquinol-cytochrome C reductase iron-sulfur subunit OS=Panax ginseng GN=QCR PE=2 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109
Identity = 192/214 (89.72%), Postives = 204/214 (95.33%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASD L S  ++ +I DIPATVAAVKNP+SKIVYD YNHER+PPGDPSKRAFAYFVL+G
Sbjct: 68  GFASDVLISKNNNSIIPDIPATVAAVKNPTSKIVYDSYNHERYPPGDPSKRAFAYFVLTG 127

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 128 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 187

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DIKLANSVD+GSLRDPQ+D  RVKDPEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 188 EEDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 247

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKL+IG
Sbjct: 248 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLMIG 281

BLAST of CSPI05G15880 vs. TrEMBL
Match: A0A0K9QA72_SPIOL (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Spinacia oleracea GN=SOVF_202070 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109
Identity = 189/214 (88.32%), Postives = 205/214 (95.79%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFAS+ L    + G+ILD+PATV A+KNPSSKI YD+YNHER+PPGDPSKRAFAYFVL+G
Sbjct: 54  GFASEHLIPKAEHGIILDVPATVHAIKNPSSKITYDEYNHERYPPGDPSKRAFAYFVLTG 113

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 114 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 173

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVD+GSLRDPQ+DEERVK+PEWL+V+GVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 174 EDDIKLANSVDLGSLRDPQKDEERVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHG 233

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLL+G
Sbjct: 234 SHYDISGRIRKGPAPYNLEVPTYSFLEDNKLLVG 267

BLAST of CSPI05G15880 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.3e-109
Identity = 189/214 (88.32%), Postives = 206/214 (96.26%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASD+L  +KD+ L+ D+P TVAAVKNP+SKIVYDDYNHER+PPGDPSKRAFAYFVL+G
Sbjct: 59  GFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFVLTG 118

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 119 GRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 178

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           +DDIKLANSVD+ SLRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 179 DDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 238

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 239 SHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

BLAST of CSPI05G15880 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 385.6 bits (989), Expect = 2.1e-107
Identity = 182/214 (85.05%), Postives = 198/214 (92.52%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GF+S  LA   + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFVLSG
Sbjct: 59  GFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSG 118

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 119 GRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRT 178

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVD+GSLRDPQ+D  RVK+PEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 179 EDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 238

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 239 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

BLAST of CSPI05G15880 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 384.0 bits (985), Expect = 6.1e-107
Identity = 180/214 (84.11%), Postives = 197/214 (92.06%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFAS  +    + G   ++PATV AVK P+SKIVYDD+NHER+PPGDPSKRAFAYFVLSG
Sbjct: 61  GFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLE NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

BLAST of CSPI05G15880 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 1

Query: 153 DPEWLVVVG-----------VCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAP 212
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 136 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 195

Query: 213 YNLEVPTYSFLEGNKLL 219
            +L +      E  K+L
Sbjct: 196 LSLALAHADIDEAGKVL 211

BLAST of CSPI05G15880 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 4.5e-120
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

BLAST of CSPI05G15880 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 7.7e-120
Identity = 213/214 (99.53%), Postives = 214/214 (100.00%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDALASTKDDGLI+DIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

BLAST of CSPI05G15880 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 2.7e-112
Identity = 197/214 (92.06%), Postives = 209/214 (97.66%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

BLAST of CSPI05G15880 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 7.7e-112
Identity = 197/214 (92.06%), Postives = 208/214 (97.20%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFASDAL+S K+  L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

BLAST of CSPI05G15880 vs. NCBI nr
Match: gi|719982616|ref|XP_010250508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 404.1 bits (1037), Expect = 1.6e-109
Identity = 191/214 (89.25%), Postives = 207/214 (96.73%), Query Frame = 1

Query: 7   GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 66
           GFAS++LA   D G+I DIPATVAAVKNP+SKIVYD++NHERFPPGDPSKRAFAYFVL+G
Sbjct: 61  GFASESLAPRHDYGIISDIPATVAAVKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLTG 120

Query: 67  GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 126
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 127 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 186
           E+DIKLANSVD+GSLRDPQ+D  RVK+PEWLVV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDVGSLRDPQEDAARVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 187 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 221
           SHYD+SGRIRKGPAPYNLEVPTYSFLEGNKLL+G
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEGNKLLVG 274

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UCRI3_TOBAC4.7e-10985.98Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI2_TOBAC4.7e-10985.98Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI_SOLTU4.7e-10986.92Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE... [more]
UCRI4_TOBAC4.7e-10985.98Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=... [more]
UCRI1_TOBAC6.1e-10985.98Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ... [more]
Match NameE-valueIdentityDescription
A0A0A0KTT3_CUCSA3.2e-120100.00Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_... [more]
A0A0A0KNC0_CUCSA1.9e-11292.06Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_... [more]
A0A060ILM1_PANGI1.5e-10989.72Ubiquinol-cytochrome C reductase iron-sulfur subunit OS=Panax ginseng GN=QCR PE=... [more]
A0A0K9QA72_SPIOL1.5e-10988.32Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Spinacia oleracea GN=SO... [more]
M5WT51_PRUPE3.3e-10988.32Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE... [more]
Match NameE-valueIdentityDescription
AT5G13430.12.1e-10785.05 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
AT5G13440.16.1e-10784.11 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
AT4G03280.11.5e-0938.96 photosynthetic electron transfer C[more]
Match NameE-valueIdentityDescription
gi|449452030|ref|XP_004143763.1|4.5e-120100.00PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|659072408|ref|XP_008465498.1|7.7e-12099.53PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|449452028|ref|XP_004143762.1|2.7e-11292.06PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|659072410|ref|XP_008465508.1|7.7e-11292.06PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis... [more]
gi|719982616|ref|XP_010250508.1|1.6e-10989.25PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Nelumbo... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004192Rieske_TM
IPR005805Rieske_Fe-S_prot_C
IPR006317Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349Rieske_Fe-S_prot
IPR017941Rieske_2Fe-2S
Vocabulary: Molecular Function
TermDefinition
GO:0008121ubiquinol-cytochrome-c reductase activity
GO:0016679oxidoreductase activity, acting on diphenols and related substances as donors
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respiratory chain
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0016020 membrane
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G15880.1CSPI05G15880.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004192Ubiquinol cytochrome reductase, transmembrane domainGENE3DG3DSA:1.20.5.270coord: 43..80
score: 2.
IPR004192Ubiquinol cytochrome reductase, transmembrane domainPFAMPF02921UCR_TMcoord: 46..91
score: 3.1
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 180..192
score: 1.4E-17coord: 158..169
score: 1.4E-17coord: 192..204
score: 1.4
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitTIGRFAMsTIGR01416TIGR01416coord: 76..220
score: 6.3
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 7..220
score: 1.2E
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 81..219
score: 2.7
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 103..206
score: 1.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 150..218
score: 18
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 82..219
score: 1.96
NoneNo IPR availablePANTHERPTHR10134:SF1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 7..220
score: 1.2E
NoneNo IPR availableunknownSSF81502ISP transmembrane anchorcoord: 31..93
score: 3.27

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None