CSPI05G15400 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTGATCAGTCGATTTGGTCTCTCTCGCACAATCTTGAATGTTGGTCCATTCTATCCTAGACTTATTCGGGGAGTCATTGCCAGTCTGCCTTCAGACATTGATGATCAGAGTAGCATTGACTATCAATATGTTCATGTGTGCGGTCGTCGGATTGTATTTTCCCCCTCAGTAATCAATGCATTTCTTGGTCTCTTAACAACGTTGGATCCTTATCTGACCCATCTTTCCACTACAACTTTGACATCTGAATTAACCGAAGGTTCACTTACTATTTGGCCCATGACGAGTATCCTTATTGCCTCCTTAAGTGACAAAAGTAAGCAATTCTTCACAAGATTGGCATTGCGAATTGGTTTCCCTCTTTCATGTCTCGAGTGTATTAGTGGTTGTGGCTACGTTCTTGTTTCATATTGGAACATGCTCTACAGTTGATGCTGAGGTGTTCATATACAACATACTTCTCCGACATGTTGCTACCTTTGTCGTCAAGATTCTGATTGCCTTGCTTTGGTTCTTCTCCAATCTGCTCATCCATTTGAATCCTGATATCCCAAGTGACTCTGATGCTCCTCGCCTGTGCCCTCGAACATTGTCACTGAGCTATAAACTGTTTCAACGCTCACATGTGTCAGATGGTGTGTATACTAGTCAGCCTCGTCACCCAACTAATCCCTGTGCAACTGAAGTTTCTGGCTCTTCTATGGGTCCTGGAATGGCTTCTGGTGATATTTCACGAGTTCTGAACTCATTGTTTGCTGAGCACATCAATTTACTTGCTGTGAGATAG ATGGAATTGATCAGTCGATTTGGTCTCTCTCGCACAATCTTGAATGTTGGTCCATTCTATCCTAGACTTATTCGGGGAGTCATTGCCAGTCTGCCTTCAGACATTGATGATCAGAGTAGCATTGACTATCAATATGTTCATGTGTGCGGTCGTCGGATTGTATTTTCCCCCTCAGTAATCAATGCATTTCTTGGTCTCTTAACAACGTTGGATCCTTATCTGACCCATCTTTCCACTACAACTTTGACATCTGAATTAACCGAAGGTTCACTTACTATTTGGCCCATGACGAGTATCCTTATTGCCTCCTTAAGTGACAAAATTGATGCTGAGGTGTTCATATACAACATACTTCTCCGACATGTTGCTACCTTTGTCGTCAAGATTCTGATTGCCTTGCTTTGGTTCTTCTCCAATCTGCTCATCCATTTGAATCCTGATATCCCAAGTGACTCTGATGCTCCTCGCCTGTGCCCTCGAACATTGTCACTGAGCTATAAACTGTTTCAACGCTCACATGTGTCAGATGGTGTGTATACTAGTCAGCCTCGTCACCCAACTAATCCCTGTGCAACTGAAGTTTCTGGCTCTTCTATGGGTCCTGGAATGGCTTCTGGTGATATTTCACGAGTTCTGAACTCATTGTTTGCTGAGCACATCAATTTACTTGCTGTGAGATAG ATGGAATTGATCAGTCGATTTGGTCTCTCTCGCACAATCTTGAATGTTGGTCCATTCTATCCTAGACTTATTCGGGGAGTCATTGCCAGTCTGCCTTCAGACATTGATGATCAGAGTAGCATTGACTATCAATATGTTCATGTGTGCGGTCGTCGGATTGTATTTTCCCCCTCAGTAATCAATGCATTTCTTGGTCTCTTAACAACGTTGGATCCTTATCTGACCCATCTTTCCACTACAACTTTGACATCTGAATTAACCGAAGGTTCACTTACTATTTGGCCCATGACGAGTATCCTTATTGCCTCCTTAAGTGACAAAATTGATGCTGAGGTGTTCATATACAACATACTTCTCCGACATGTTGCTACCTTTGTCGTCAAGATTCTGATTGCCTTGCTTTGGTTCTTCTCCAATCTGCTCATCCATTTGAATCCTGATATCCCAAGTGACTCTGATGCTCCTCGCCTGTGCCCTCGAACATTGTCACTGAGCTATAAACTGTTTCAACGCTCACATGTGTCAGATGGTGTGTATACTAGTCAGCCTCGTCACCCAACTAATCCCTGTGCAACTGAAGTTTCTGGCTCTTCTATGGGTCCTGGAATGGCTTCTGGTGATATTTCACGAGTTCTGAACTCATTGTTTGCTGAGCACATCAATTTACTTGCTGTGAGATAG
BLAST of CSPI05G15400 vs. TrEMBL
Match: Q84VH9_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11 Identity = 63/221 (28.51%), Postives = 100/221 (45.25%), Query Frame = 1
BLAST of CSPI05G15400 vs. TrEMBL
Match: Q84VH7_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.5e-11 Identity = 70/258 (27.13%), Postives = 113/258 (43.80%), Query Frame = 1
BLAST of CSPI05G15400 vs. TrEMBL
Match: Q84VH5_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.5e-11 Identity = 62/219 (28.31%), Postives = 99/219 (45.21%), Query Frame = 1
BLAST of CSPI05G15400 vs. TrEMBL
Match: O64406_SOYBN (Envelope-like (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11 Identity = 62/221 (28.05%), Postives = 99/221 (44.80%), Query Frame = 1
BLAST of CSPI05G15400 vs. TrEMBL
Match: Q84VI3_SOYBN (Envelope-like protein (Fragment) OS=Glycine max PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-10 Identity = 69/258 (26.74%), Postives = 113/258 (43.80%), Query Frame = 1
BLAST of CSPI05G15400 vs. NCBI nr
Match: gi|659112427|ref|XP_008456217.1| (PREDICTED: uncharacterized protein LOC103496220 [Cucumis melo]) HSP 1 Score: 162.5 bits (410), Expect = 8.4e-37 Identity = 106/242 (43.80%), Postives = 144/242 (59.50%), Query Frame = 1
BLAST of CSPI05G15400 vs. NCBI nr
Match: gi|659120586|ref|XP_008460260.1| (PREDICTED: uncharacterized protein LOC103499138 [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34 Identity = 102/240 (42.50%), Postives = 140/240 (58.33%), Query Frame = 1
BLAST of CSPI05G15400 vs. NCBI nr
Match: gi|659123173|ref|XP_008461531.1| (PREDICTED: uncharacterized protein LOC103500102 [Cucumis melo]) HSP 1 Score: 154.1 bits (388), Expect = 3.0e-34 Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 1
BLAST of CSPI05G15400 vs. NCBI nr
Match: gi|659074587|ref|XP_008437685.1| (PREDICTED: uncharacterized protein LOC103483026 [Cucumis melo]) HSP 1 Score: 141.4 bits (355), Expect = 2.0e-30 Identity = 83/176 (47.16%), Postives = 112/176 (63.64%), Query Frame = 1
BLAST of CSPI05G15400 vs. NCBI nr
Match: gi|659083295|ref|XP_008442272.1| (PREDICTED: uncharacterized protein LOC103486179 [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 4.9e-29 Identity = 93/224 (41.52%), Postives = 120/224 (53.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|