CSPI05G14910 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG ATGAGGACCGATATCTTTGATTTCTTAGTTGACATTGTTCCTAGGGATGAGATCAAGGATGAGGCTAGGATGGGCGGTATGGTTGGAGCTACTGTTAGTGGAGTTCCCTACTATTATCCGCCTATAGGTCAACCTGTGGGGGCTCCCGGGGGAATGATGATTGGAAGACCGACAATGGATCCCACTGGAGTTTACGCTCAGCCGTCGTCCTAG
BLAST of CSPI05G14910 vs. Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-24 Identity = 58/72 (80.56%), Postives = 60/72 (83.33%), Query Frame = 1
BLAST of CSPI05G14910 vs. Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.8e-22 Identity = 53/75 (70.67%), Postives = 57/75 (76.00%), Query Frame = 1
BLAST of CSPI05G14910 vs. Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-09 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
BLAST of CSPI05G14910 vs. Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.8e-07 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1
BLAST of CSPI05G14910 vs. TrEMBL
Match: A0A0A0LNK7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001515 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 4.1e-29 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 1
BLAST of CSPI05G14910 vs. TrEMBL
Match: A0A067JFC2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26442 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 8.5e-27 Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 1
BLAST of CSPI05G14910 vs. TrEMBL
Match: A0A067DWE4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0269011mg PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.1e-25 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 1
BLAST of CSPI05G14910 vs. TrEMBL
Match: A0A067E8S6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0269011mg PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.1e-25 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 1
BLAST of CSPI05G14910 vs. TrEMBL
Match: V4TJW4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032646mg PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.1e-25 Identity = 59/72 (81.94%), Postives = 62/72 (86.11%), Query Frame = 1
BLAST of CSPI05G14910 vs. TAIR10
Match: AT3G48590.1 (AT3G48590.1 nuclear factor Y, subunit C1) HSP 1 Score: 112.1 bits (279), Expect = 1.4e-25 Identity = 58/72 (80.56%), Postives = 60/72 (83.33%), Query Frame = 1
BLAST of CSPI05G14910 vs. TAIR10
Match: AT5G63470.1 (AT5G63470.1 nuclear factor Y, subunit C4) HSP 1 Score: 105.9 bits (263), Expect = 1.0e-23 Identity = 53/75 (70.67%), Postives = 57/75 (76.00%), Query Frame = 1
BLAST of CSPI05G14910 vs. TAIR10
Match: AT1G54830.2 (AT1G54830.2 nuclear factor Y, subunit C3) HSP 1 Score: 63.5 bits (153), Expect = 5.9e-11 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
BLAST of CSPI05G14910 vs. TAIR10
Match: AT1G08970.4 (AT1G08970.4 nuclear factor Y, subunit C9) HSP 1 Score: 55.5 bits (132), Expect = 1.6e-08 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1
BLAST of CSPI05G14910 vs. TAIR10
Match: AT1G56170.1 (AT1G56170.1 nuclear factor Y, subunit C2) HSP 1 Score: 49.7 bits (117), Expect = 8.8e-07 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 1
BLAST of CSPI05G14910 vs. NCBI nr
Match: gi|449440548|ref|XP_004138046.1| (PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 5.9e-29 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 1
BLAST of CSPI05G14910 vs. NCBI nr
Match: gi|659128902|ref|XP_008464428.1| (PREDICTED: nuclear transcription factor Y subunit C-1 [Cucumis melo]) HSP 1 Score: 134.8 bits (338), Expect = 5.9e-29 Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = 1
BLAST of CSPI05G14910 vs. NCBI nr
Match: gi|764576951|ref|XP_011463262.1| (PREDICTED: nuclear transcription factor Y subunit C-1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 131.0 bits (328), Expect = 8.5e-28 Identity = 63/71 (88.73%), Postives = 64/71 (90.14%), Query Frame = 1
BLAST of CSPI05G14910 vs. NCBI nr
Match: gi|1009130162|ref|XP_015882147.1| (PREDICTED: nuclear transcription factor Y subunit C-1 [Ziziphus jujuba]) HSP 1 Score: 128.6 bits (322), Expect = 4.2e-27 Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of CSPI05G14910 vs. NCBI nr
Match: gi|802771281|ref|XP_012090689.1| (PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-26 Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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