CSPI05G14060 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G14060
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cysteine-rich receptor-kinase-like protein
Location	Chr5 : 14292695 .. 14292982 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACCAACCACCTCCTCTCCACCCTCACCTCCGATCATCCAATTGACTATGGCTTCTATAACCTCTCTTCCGGCATCCTCGAAAACAGAGCATACGTAATCGGATTCTGCAGAGGGGATATTTTCGCAGATTCTTGCCAGAGATGCCTCAACGACTCCAGACATCTTCTCTCTTTGCGGTGTCCGACCCAGAACGAAGCCATTGGATGGTACGTTACCGGATTTGTCTCGGCAGCAATGCGACGAGTGCTCGGTTGGGGCTCTGCCTATAATCCGAAACTGCTG

mRNA sequence

ATGATTACCAACCACCTCCTCTCCACCCTCACCTCCGATCATCCAATTGACTATGGCTTCTATAACCTCTCTTCCGGCATCCTCGAAAACAGAGCATACGTAATCGGATTCTGCAGAGGGGATATTTTCGCAGATTCTTGCCAGAGATGCCTCAACGACTCCAGACATCTTCTCTCTTTGCGGTGTCCGACCCAGAACGAAGCCATTGGATGGTACGTTACCGGATTTGTCTCGGCAGCAATGCGACGAGTGCTCGGTTGGGGCTCTGCCTATAATCCGAAACTGCTG

Coding sequence (CDS)

ATGATTACCAACCACCTCCTCTCCACCCTCACCTCCGATCATCCAATTGACTATGGCTTCTATAACCTCTCTTCCGGCATCCTCGAAAACAGAGCATACGTAATCGGATTCTGCAGAGGGGATATTTTCGCAGATTCTTGCCAGAGATGCCTCAACGACTCCAGACATCTTCTCTCTTTGCGGTGTCCGACCCAGAACGAAGCCATTGGATGGTACGTTACCGGATTTGTCTCGGCAGCAATGCGACGAGTGCTCGGTTGGGGCTCTGCCTATAATCCGAAACTGCTG

Homology

[Close]

BLAST of CSPI05G14060 vs. Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.3e-10
Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILE-NRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRC 63
           N L+S+L+S     YGFYNLSSG     RAY IG CR ++  D C  C+  +   L+ +C
Sbjct: 53  NRLVSSLSSLKSQAYGFYNLSSGDSSGERAYAIGLCRREVKRDDCVSCIQTAARNLTKQC 112

Query: 64  PTQNEAIGWYVTGFVSAAMRRVLG 87
           P   +A+ WY       + R + G
Sbjct: 113 PLTKQAVVWYTHCMFRYSNRTIYG 136

[Close]

BLAST of CSPI05G14060 vs. Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILE-NRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRC 63
           N L+S+L+S     YGFYNLSSG     RAY IG CR ++  D C  C+  +   L  +C
Sbjct: 55  NGLVSSLSSLTSKPYGFYNLSSGDSSGERAYAIGLCRREVKRDDCLSCIQIAARNLIEQC 114

Query: 64  PTQNEAIGWY 73
           P  N+A+ WY
Sbjct: 115 PLTNQAVVWY 124

[Close]

BLAST of CSPI05G14060 vs. TrEMBL
Match: A0A0A0LS47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065930 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-23
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLL+T T+DH IDYGFYN S G  EN+A VIG CRGD+  ++C++CLNDSR LL +RCP
Sbjct: 57  NHLLTTFTTDHRIDYGFYNFSYGAAENKANVIGLCRGDVSPETCRKCLNDSRDLLPVRCP 116

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQ EAIGWY    +  + R +LG
Sbjct: 117 TQKEAIGWYQNCMLRYSDRPILG 139

[Close]

BLAST of CSPI05G14060 vs. TrEMBL
Match: A0A0A0LX64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065370 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-16
Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLLST T+ H I+YGFYN S G L+N+A VIG CRGD+   +C  CLN+SR LL L CP
Sbjct: 47  NHLLSTFTTHHQINYGFYNFSYG-LQNKANVIGLCRGDLTLLACTTCLNNSRTLLPLLCP 106

Query: 64  TQNEAIGWY 73
              EAIGWY
Sbjct: 107 NHTEAIGWY 114

[Close]

BLAST of CSPI05G14060 vs. TrEMBL
Match: G8A120_MEDTR (Cysteine-rich receptor-like protein kinase OS=Medicago truncatula GN=MTR_116s0043 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.0e-16
Identity = 43/83 (51.81%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           N LLS LTS+  I+YGFYN S G   ++   IG CRGD+  D C+ CLNDSR LL+  CP
Sbjct: 54  NTLLSNLTSNTQINYGFYNFSYGQNTDKVNAIGLCRGDVKPDVCRSCLNDSRVLLTKLCP 113

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
            Q EAIGWYV   +  + R + G
Sbjct: 114 NQKEAIGWYVDCMLRYSNRSIFG 136

[Close]

BLAST of CSPI05G14060 vs. TrEMBL
Match: V7BBC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G049800g PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.0e-16
Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           N LLS LTS+  IDYGFYNLS G   ++ Y IG CRGD+  D C+ C+N+S  LL+  CP
Sbjct: 53  NTLLSNLTSNTQIDYGFYNLSYGENSDKVYAIGVCRGDVKPDECRSCINNSTVLLTQLCP 112

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
            Q EAIGWY    +  + R + G
Sbjct: 113 NQKEAIGWYDKCMLRYSNRSIFG 135

[Close]

BLAST of CSPI05G14060 vs. TrEMBL
Match: A0A0A0LX67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065420 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-15
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 1


Query: 4  NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
          NHLLST T+ H IDYGFYNLS G  +++AY IG CRGD+  DSC+ CLN+S  LL+  CP
Sbjct: 30 NHLLSTFTT-HQIDYGFYNLSYGH-DHKAYAIGLCRGDVMPDSCRSCLNNSITLLTNNCP 89

Query: 64 TQNEAIGWY 73
          TQ  AI WY
Sbjct: 90 TQTNAIVWY 96

[Close]

BLAST of CSPI05G14060 vs. TAIR10
Match: AT4G21410.1 (AT4G21410.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 29)

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-11
Identity = 32/84 (38.10%), Postives = 45/84 (53.57%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILE-NRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRC 63
           N L+S+L+S     YGFYNLSSG     RAY IG CR ++  D C  C+  +   L+ +C
Sbjct: 53  NRLVSSLSSLKSQAYGFYNLSSGDSSGERAYAIGLCRREVKRDDCVSCIQTAARNLTKQC 112

Query: 64  PTQNEAIGWYVTGFVSAAMRRVLG 87
           P   +A+ WY       + R + G
Sbjct: 113 PLTKQAVVWYTHCMFRYSNRTIYG 136

[Close]

BLAST of CSPI05G14060 vs. TAIR10
Match: AT4G21400.1 (AT4G21400.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 28)

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-10
Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILE-NRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRC 63
           N L+S+L+S     YGFYNLSSG     RAY IG CR ++  D C  C+  +   L  +C
Sbjct: 55  NGLVSSLSSLTSKPYGFYNLSSGDSSGERAYAIGLCRREVKRDDCLSCIQIAARNLIEQC 114

Query: 64  PTQNEAIGWY 73
           P  N+A+ WY
Sbjct: 115 PLTNQAVVWY 124

[Close]

BLAST of CSPI05G14060 vs. TAIR10
Match: AT4G11490.1 (AT4G11490.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 33)

HSP 1 Score: 47.0 bits (110), Expect = 7.7e-06
Identity = 23/66 (34.85%), Postives = 31/66 (46.97%), Query Frame = 1


Query: 6   LLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCPTQ 65
           +L++L S     YGFYN S G + +  +V+G C        C  CL  +   L   CP Q
Sbjct: 47  ILTSLASKVVDHYGFYNSSIGKVPDEVHVMGMCIDGTEPTVCSDCLKVAADQLQENCPNQ 106

Query: 66  NEAIGW 72
            EA  W
Sbjct: 107 TEAYTW 112

[Close]

BLAST of CSPI05G14060 vs. NCBI nr
Match: gi|659067845|ref|XP_008441587.1| (PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X2 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLLST TSDH IDYGFYNLSSGI ENRAYVIG CRGDI ADSC+RCLNDSR LL LRCP
Sbjct: 74  NHLLSTHTSDHQIDYGFYNLSSGIPENRAYVIGLCRGDISADSCRRCLNDSRDLLPLRCP 133

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQNEAIGWYVT  +  + R +LG
Sbjct: 134 TQNEAIGWYVTCMLRYSNRPILG 156

[Close]

BLAST of CSPI05G14060 vs. NCBI nr
Match: gi|659067843|ref|XP_008441577.1| (PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X1 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLLST TSDH IDYGFYNLSSGI ENRAYVIG CRGDI ADSC+RCLNDSR LL LRCP
Sbjct: 74  NHLLSTHTSDHQIDYGFYNLSSGIPENRAYVIGLCRGDISADSCRRCLNDSRDLLPLRCP 133

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQNEAIGWYVT  +  + R +LG
Sbjct: 134 TQNEAIGWYVTCMLRYSNRPILG 156

[Close]

BLAST of CSPI05G14060 vs. NCBI nr
Match: gi|659067847|ref|XP_008441594.1| (PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X3 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-30
Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLLST TSDH IDYGFYNLSSGI ENRAYVIG CRGDI ADSC+RCLNDSR LL LRCP
Sbjct: 74  NHLLSTHTSDHQIDYGFYNLSSGIPENRAYVIGLCRGDISADSCRRCLNDSRDLLPLRCP 133

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQNEAIGWYVT  +  + R +LG
Sbjct: 134 TQNEAIGWYVTCMLRYSNRPILG 156

[Close]

BLAST of CSPI05G14060 vs. NCBI nr
Match: gi|659068825|ref|XP_008446476.1| (PREDICTED: cysteine-rich receptor-like protein kinase 28 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 5.0e-23
Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLL+TLT+DH IDYGFYN S G  ENRA +IG CRGDI  ++C++CLNDSR LL +RCP
Sbjct: 715 NHLLTTLTTDHHIDYGFYNFSYGAGENRANLIGLCRGDISPETCRKCLNDSRDLLPVRCP 774

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQ EAIGWY    +  + R +LG
Sbjct: 775 TQKEAIGWYQDCMLRYSDRPILG 797

[Close]

BLAST of CSPI05G14060 vs. NCBI nr
Match: gi|778664887|ref|XP_011648430.1| (PREDICTED: LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 29 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 6.5e-23
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 4   NHLLSTLTSDHPIDYGFYNLSSGILENRAYVIGFCRGDIFADSCQRCLNDSRHLLSLRCP 63
           NHLL+T T+DH IDYGFYN S G  EN+A VIG CRGD+  ++C++CLNDSR LL +RCP
Sbjct: 57  NHLLTTFTTDHRIDYGFYNFSYGAAENKANVIGLCRGDVSPETCRKCLNDSRDLLPVRCP 116

Query: 64  TQNEAIGWYVTGFVSAAMRRVLG 87
           TQ EAIGWY    +  + R +LG
Sbjct: 117 TQKEAIGWYQNCMLRYSDRPILG 139

The following BLAST results are available for this feature:

BLAST of CSPI05G14060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRK29_ARATH	6.3e-10	38.10	Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 P...	[more]
CRK28_ARATH	3.1e-09	44.29	Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 P...	[more]

BLAST of CSPI05G14060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS47_CUCSA	4.5e-23	60.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065930 PE=4 SV=1	[more]
A0A0A0LX64_CUCSA	2.4e-16	62.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065370 PE=4 SV=1	[more]
G8A120_MEDTR	7.0e-16	51.81	Cysteine-rich receptor-like protein kinase OS=Medicago truncatula GN=MTR_116s004...	[more]
V7BBC3_PHAVU	7.0e-16	50.60	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G049800g PE=4 SV=1	[more]
A0A0A0LX67_CUCSA	1.2e-15	62.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G065420 PE=3 SV=1	[more]

BLAST of CSPI05G14060 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21410.1	3.6e-11	38.10	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	[more]
AT4G21400.1	1.8e-10	44.29	cysteine-rich RLK (RECEPTOR-like protein kinase) 28	[more]
AT4G11490.1	7.7e-06	34.85	cysteine-rich RLK (RECEPTOR-like protein kinase) 33	[more]

BLAST of CSPI05G14060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067845\|ref\|XP_008441587.1\|	1.4e-30	79.52	PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X2 [Cucumis me...	[more]
gi\|659067843\|ref\|XP_008441577.1\|	1.4e-30	79.52	PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X1 [Cucumis me...	[more]
gi\|659067847\|ref\|XP_008441594.1\|	1.4e-30	79.52	PREDICTED: cysteine-rich repeat secretory protein 38-like isoform X3 [Cucumis me...	[more]
gi\|659068825\|ref\|XP_008446476.1\|	5.0e-23	62.65	PREDICTED: cysteine-rich receptor-like protein kinase 28 [Cucumis melo]	[more]
gi\|778664887\|ref\|XP_011648430.1\|	6.5e-23	60.24	PREDICTED: LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 29 [C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002902	GNK2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G14060.1	CSPI05G14060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002902	Gnk2-homologous domain	PFAM	PF01657	Stress-antifung	coord: 4..72 score: 1.
IPR002902	Gnk2-homologous domain	PROFILE	PS51473	GNK2	coord: 1..84 score: 10
None	No IPR available	PANTHER	PTHR32099	CYSTEINE-RICH REPEAT SECRETORY PROTEIN	coord: 4..72 score: 3.6
None	No IPR available	PANTHER	PTHR32099:SF4	CYSTEINE-RICH REPEAT SECRETORY PROTEIN 1-RELATED	coord: 4..72 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G14060	Wax gourd	cpiwgoB451
CSPI05G14060	Wax gourd	cpiwgoB455
CSPI05G14060	Cucumber (Gy14) v1	cgycpiB371
CSPI05G14060	Cucurbita maxima (Rimu)	cmacpiB759
CSPI05G14060	Cucurbita moschata (Rifu)	cmocpiB749
CSPI05G14060	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G14060	Melon (DHL92) v3.5.1	cpimeB343
CSPI05G14060	Watermelon (Charleston Gray)	cpiwcgB401
CSPI05G14060	Cucurbita pepo (Zucchini)	cpecpiB441
CSPI05G14060	Bottle gourd (USVL1VR-Ls)	cpilsiB325
CSPI05G14060	Melon (DHL92) v3.6.1	cpimedB332
CSPI05G14060	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G14060	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G14060	Watermelon (97103) v2	cpiwmbB389