CSPI05G13260 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G13260
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	GRIP and coiled-coil domain-containing protein 1
Location	Chr5 : 12820023 .. 12825149 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAAATGGTCATCCAAATATAGGATGTTAAGGATAATTATGGAAATATGGTGGTTTAAAAAGTTGAAAGAGTAAAGCATATGTTTATAAAAGTTCCCAAATCAAAATAAAACAAGATACTGATAAAACAGAGAATTGATAGTCTTTCACCAACTGTGTATCTGAACAGAGGAAAGCCCTCTAAACTTGCCTCCAACCATTCTTGATCGTTGAAGAGAAACCGCGGTTCCTCAATAAAGCAGCGGTCATCGTCGGTGGCTATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTGTAAGTCTCTCCCTTATTCGTTTCTTCTTTTTCTCCCTCTGTCATAAAGCTTATTTATTGCCTCAATTGGATTGGATCCGGCGGTGTAGATCGGAATGACAGTTGTAGGGAAACCCGTTTAATCTTTTTTTCGTTGTTTGGTGATCTTGTTATCACAAGTTATCACCCTCCTCGATGAATCTAGTTACTGGTTTGGACAACTTATGAAAACATTAGGAATCTTCGCTAGTTTTGGAAGTCAAATACATATTCTTTGGGAGCTTCTGTCTTTTTAGTTTCCAGAATTTGGCTAACTAGAAGGTAAAAAATGTTTTTGAAAGTAGATTAGAAAACTAGGAAGAAATTTATGTCAGTATGATTTCAAAATTAAATGAAAGAAAGAATTAGAGAATAGCCCCTGCTTCAATCACCAATCGACCTAAAAGGGTGAAGCTAGTGAGTGAAGGTAAATTTAATATAATGTCTAACACTCCCTCACTTGTAGACTTGAATTACGAAGAAAGACCCAATAAGTGAGAATCTATGTTAAATGAGGAGGAAACAACATTGTAAGGGCTTGAACCGAGGATATCCTGAAGTAAACTGCTAATACCATTTTAAATCACCAATCAACCCAAAAGTTTAAGCAAGTGGGTAAAGAAAAAATTAATTATATATCATCTAACACCCTTGGATATTCCACTAAAGAAACGTTGTGCCATTTTACAAGCCATTTATCAAGGGTACAGAGAAGTTGAAAAGATTTGTGGGTGTAATGGTTGATTTGGCTACTAACGTTGGCTTATCATCTTTCCTAATCGGATCATTGAACGTTTAAGAATGCCCCTTGGTACCAACCTTTACATTTGTGATGGCAAAAATTGCAAATTGAGCTTTCTGAAATGGCAGAACTTGCAGTTGTTGCTATCTCGCTTTAGTCAAGTTGATGGTTGCTAGTGTTCCTGCCTATGTTCTTCTGATGTTTAGAATTCTTCCCATTGTGATTGAGAACATGGAGAAGTCCTATTAGAAAATTTGCACAGAAAGCAATCGATTGCAATTATGATCGCTACTACTGCATTAGATGGAAAATTGTTGTTTCTAATTGTGGAGAAAGGTCTCATATCAGGCACATTAGAAAGCAGATTAAAGCTAGCCAATGGATTTACCATTTTAAAAAATAAAACCATTCCAAGCAAGTGCATAAAGATCCTTGGGGCTGGAAAATAGGTGGGTTTTTGCTATAGTCATTGTAAAATACTGGTTTTCTCATTGAAGGTTGTCAGTCAAGTGAATAGAAGGGCTTTGGTTAAATTCTTAGAAGATCTCTGTATGGGTTGGGAATATCACTCAAGTTTATCCTTCCCTAGGCAATAGGCTTTATTTCAGTGTAGAGAATGAACTGTTAAATACTGGTATGGGGGAATTTAGCAAGAGATAAAGGGAGGGGGCAAAAGATAGGAATGATATCTCTATTCAGCTATGGTACAAGTATGAATATCCAAGTATTCACAATATAGAAGGAACTAAAGTAATATTTTTGATGGGTAAGAAGGTCAGTCCATAACTGGTGATCTGTAATAGTAATTAGTAACTACACAAAGGAAACTGGGCGACATAAATGGCTTAAGTAAACAAATTATATTTTTGACACTTTCCAGCAAGCTGAGCTATAGATGTTGATTGACCCGTCCTGCTTTTTGTTAATTCACGTCACCATGTGATTAGGATTCTTCATACACATAGTATCATGTGATAGATCTTTGAACAATTGTTGGTCTACCCATCTGCATCCAGTATACATCCAAATGTTGTTGGGAAAATAGTGAAGATTATACTGTTGCAGTGAAATTGTAGGATAGTTTAAAAAGGAGTTCGGAAACTTATTGTCCTCAGGAGCATTCAGCTAATTCCTTTTATTTGGACTTTGGAATATGGTGTAGTTTCATGGGAGATTTGCTCAATGAAATCAGAGAAGAACCTCAAACGCCTAAAGGTGATTATTGAAGAGACCGCCAATTAAAAACTAAAAATGATAAACTATAATGATTGAAAGGGGGCTTTGTTTATTGCTTCCTCCAACTTTGAGGTTGGTTTTCTTTTTGTAATTATGAGTATGGATTCTTGAAGAAGGGTATGTTTTGATACTTTTTAGAAAAAGATGAAGGGAGTGAGAGTGATTTTTTAAAGAGAAATGATTTTGTAATCATGGTTTCAATTGGGTAAAGAATATGAGCCTAAATATACTAAGTATTCACAATACAGAAGGAAAAGATTTGTGACCAAGGAAATAAAATATGTTTAATGAATATGAGAGGTTCCCTGTCTTTGGTTGTTCCAATGGCAATTACATAAAGGAGAACGGTCCAATTTTTAATTGTAACGTGGAACTTTATTTTTGTAAGAATTTCATGGGTTTAGAGTGAAGATTGAATTGTTCTGAAAAGATCTTGGAATTCTTCTCTCTTCTTCAATGTAAGATCAAAGGGTATTGCTCACCCGTGTCATTCCCTTTCTTTAGAATCACTATTCATAAGATATTGTTGTGAATACCATCACTCATTTCTTTTCAAGGTCATTTGGAAAGTGAGGTGTCCTTCAAGTAACACTTCATCGTAGCACCAATGCTAACTGAAAAGCATTTTTTGTCACCTCGTTTGGATAGTGTTTGGCCATAGGTTGATGTCCTATCCTATCTCTTTCTTTTTAGCAGTGATGAAACTTTCTGTTCTTGATAAAAGGAAAATTAAAAATGACAATGATAATAATAATTAGGCAAAATTAATTTGGTGAAGCGAAATATCTATATACTGCATTTAGAAATAGTACACTTGAGTCTTTTGCTTGTCAAGACCAGAAAGGCCATTGCTGAGGTGTAGTCAGTTTGAGACAGGATACATGCATTTAATGGACAAAATCTTCCTATCTTGGATTTTCTTGGATAAGAACTGTTGGAAATTCTTATGTTGCTCGCCACGTAGGCATCAACATTGTAGATTAATTTCATCGTTTACTTGTCTTGTAAAATCATTCTTCTTTTTCAATAACAATCCTTAGATAGATTCAGTGTTTATTATCCATTTTTTGGTGCCGAAGTTAGTTATGATGTCTGAATGATATTCATGAGCATGGCGTTATTTATTCCAAAGCAAAGTAGCAATAAATCGTATTTGGGACAATGGACATAAATGACATCGGTTTGAAAGGACTTTTTATAATTATTCTCTTAGTCTTATCATTTGGGATTAAAGCCTGCCCGATTACATCTTGTTAAGGTGTTAGGTTCTGTTTTGGACTTTGCTTTCTTGCATTCCACTTTTGTATTCTTTTTATCTCACTTGCATTAACAGCCATGTCATGGAATTAGCATATGACTCCACACTGAATACAATACTTTTTAGGTCATCTAGATTTTATTTTTAGTTCCACACTTTTAATCCTTTTATATATTTTAATTGGTTACTTTTGAATTTAAAAAAATGATCTTGGGGCCTCATGCCCAAGCTTCGGTCATGGTCATGGCCTTGTCATGTCCACGAGTGTCCAGGAACTAATCTTTGTAATAAATTATTCATGTAATATCTATTCTAGCACGAACACATCTTTTGTTGCTTGCTTGCGTATCATTAGATCATGAACATTCTCATCTATCTTTTTCTGATTATTCTCCCTCTATTGATGTGCAAATACTACGGGCTTATGGCCTTGTATGTGCAAATAGCATGGGCTTATTGGCTTGTTTGGTAGGAAATCTCAAAACAAAAATTAAAATACAAGAGATTTCATGTTTTCGAATATTTGTTTGTAGCCGATTCCGAAATTGAATTCTAATCTAAACAATGGTTTAAAATTTTTGATAATATAGTTAAAAATCATTATTTAAACGAGTTATAGTTAACCCACTATTAGTTGACAATGAATTGTTATTGATTTCTTTAGAAACATGCTTTATGTTAAAAAAAAATTACAATTATTATTAACTTATTATACATTACATAATACATATTTTAATCTTTTTAGAAAATATGAATTTGAACTTACAACATGACATACGGTATCTAGAAAATCTAAGTGTGTTTATCTTTTTTTAATATAACTATGCATTTTAAAATTTAAAATTCAAAATCTGGATAAAATAAGAATACAATTATGTTATTTTTAGAATTTGCACACATAAACTTTCTAAGAAACAGTTTTCAAAAATAGATTTTGAATTATCTGTTAAACATTTGATAAACTCTAAAAGGATAAAGCAGAATTTGTATCGTAAGCTATACATGTCCTAAGCGATTCTAATAACGTGGGAATCAATTGTGCAGACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAAATTCTCGACTTCCCATTCATGTGATCCGATTCAATACTCACTCTCAAACTTTCTAAGTTTGTATCTGTTTATGTTGATGTGCAGGATGATGTAAAAATGACCATCGACGTGTCTCTCTTTTTTTTTCTTTTTTTTTTGTTGATTTTTTCCTTAAGTTGAGAGATGTAAAAATGTTCATCAATATGTCGACAGTTTTATTCGATATTATCAAGTGGAAAGACATAAAAATGTTCGTGTTGATATTGTCAAAGTCAGATTTTGAAGCAAGTCTTAGACAAGATGGAGAGGTGTTCAAGAAGTCATAATAAAAATGCTAAATGATAAATAATATATGTGTTACCATAC

mRNA sequence

ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAA

Coding sequence (CDS)

ATGGCTCGGGCAACTGGTCGGATCAGGAATGGGACCGATTCCTCGGGGGGAGGGTTTCTTAAGGCCACTTTCAGATTCTTGAAGATGGCGGAGTTTGAGATCCTTTTCGTTCTCTTCTTCATCGTAGCTTTTATTGTCTTCAAAGATCTTACATCAAGACCAGAGTACAACCAAATTCTTGTAAAGAAGCCTGAGGGATTTGATATGTGGCCATTCCAGTAA

Homology

[Close]

BLAST of CSPI05G13260 vs. TrEMBL
Match: A0A0A0KPT8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315390 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.4e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 74
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CSPI05G13260 vs. TrEMBL
Match: A0A078ECD0_BRANA (BnaC05g39210D protein OS=Brassica napus GN=BnaC05g39210D PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-14
Identity = 41/75 (54.67%), Postives = 56/75 (74.67%), Query Frame = 1


Query: 1  MARATGRIRNGT---DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYN 60
          + R  G IR G    DS    F+ + F   ++AEFEILFVLFF++A+++FKDLT+RPEYN
Sbjct: 2  IGRRAGTIRVGMRRDDSILTRFVDSVFSLFRLAEFEILFVLFFVIAYVIFKDLTARPEYN 61

Query: 61 QILVKKPEGFDMWPF 73
          +ILV+KP G+D+WPF
Sbjct: 62 RILVEKPRGYDIWPF 76

[Close]

BLAST of CSPI05G13260 vs. TrEMBL
Match: A0A0D3CK90_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-14
Identity = 35/54 (64.81%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 19 FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF 73
          F+ + F   ++AEFEILFVLFF++A+++FKDLT+RPEYN+ILV+KP G+DMWPF
Sbjct: 23 FVDSVFSLFRLAEFEILFVLFFVIAYVIFKDLTARPEYNRILVEKPRGYDMWPF 76

[Close]

BLAST of CSPI05G13260 vs. TrEMBL
Match: E0CQN0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15380 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-14
Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 1


Query: 8  IRNGTDSSGGGFLKAT---FRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKP 67
          +R G++ +   F +A    F F++ AEFEILFVLFF++AFI+FKDLTSRPEYNQILVKKP
Sbjct: 1  MRGGSNRNPSTFTRAVNSVFTFVRYAEFEILFVLFFLIAFIIFKDLTSRPEYNQILVKKP 60

Query: 68 EGFDMWPF 73
           G D WP+
Sbjct: 61 GGPDWWPY 68

[Close]

BLAST of CSPI05G13260 vs. TrEMBL
Match: M5XB77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013818mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-14
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 1


Query: 9   RNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFD 68
           RN  +S+   ++++ F F+K AEFEILFVLFF++AF+VFKDLTSRPEY+QILVKKP G  
Sbjct: 38  RNSNESALTRWVQSVFGFVKFAEFEILFVLFFVIAFLVFKDLTSRPEYSQILVKKPGGGG 97

Query: 69  MWPF 73
            WP+
Sbjct: 98  FWPY 101

[Close]

BLAST of CSPI05G13260 vs. TAIR10
Match: AT3G14430.1 (AT3G14430.1 unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 4.8e-16
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 1


Query: 19 FLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF 73
          F+ + F F ++AEFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Sbjct: 23 FVDSVFYFFRLAEFEILFVLFMLITYVIFKDLTSRPEYNRILVEKPGGSDIWPF 76

[Close]

BLAST of CSPI05G13260 vs. NCBI nr
Match: gi|700195717|gb|KGN50894.1| (hypothetical protein Csa_5G315390 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 74
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CSPI05G13260 vs. NCBI nr
Match: gi|778702065|ref|XP_011655131.1| (PREDICTED: uncharacterized protein LOC101207856 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 9.1e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 74
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CSPI05G13260 vs. NCBI nr
Match: gi|659126333|ref|XP_008463128.1| (PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 3.8e-31
Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 1


Query: 1  MARATGRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60
          MARA+GR RNG+DSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL
Sbjct: 1  MARASGRSRNGSDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQIL 60

Query: 61 VKKPEGFDMWPFQ 74
          VKKPEGFDMWPFQ
Sbjct: 61 VKKPEGFDMWPFQ 73

[Close]

BLAST of CSPI05G13260 vs. NCBI nr
Match: gi|657978932|ref|XP_008381408.1| (PREDICTED: uncharacterized protein LOC103444259 [Malus domestica])

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-15
Identity = 41/64 (64.06%), Postives = 53/64 (82.81%), Query Frame = 1


Query: 9  RNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFD 68
          RN  +++  G +K+ FRF + AEFEILFVLFF++AFI+FKDLTSRPEY+QILVKKP G  
Sbjct: 34 RNSNEAALTGGVKSVFRFFRFAEFEILFVLFFVIAFIIFKDLTSRPEYSQILVKKPGGGS 93

Query: 69 MWPF 73
          +WP+
Sbjct: 94 IWPY 97

[Close]

BLAST of CSPI05G13260 vs. NCBI nr
Match: gi|694389981|ref|XP_009370592.1| (PREDICTED: uncharacterized protein LOC103959934 [Pyrus x bretschneideri])

HSP 1 Score: 88.2 bits (217), Expect = 6.6e-15
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 6  GRIRNGTDSSGGGFLKATFRFLKMAEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPE 65
          G  RN  +S+    +K+ FRF++ AEFEILFVLFF++AFI+FKDLTS+PEY+QILVKKP 
Sbjct: 5  GGSRNSNESALTRGVKSVFRFVRFAEFEILFVLFFVIAFIIFKDLTSKPEYSQILVKKPG 64

Query: 66 GFDMWPF 73
          G  +WP+
Sbjct: 65 GVSIWPY 71

The following BLAST results are available for this feature:

BLAST of CSPI05G13260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G13260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPT8_CUCSA	6.4e-33	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G315390 PE=4 SV=1	[more]
A0A078ECD0_BRANA	1.7e-14	54.67	BnaC05g39210D protein OS=Brassica napus GN=BnaC05g39210D PE=4 SV=1	[more]
A0A0D3CK90_BRAOL	2.3e-14	64.81	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
E0CQN0_VITVI	2.3e-14	61.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15380 PE=4 SV=...	[more]
M5XB77_PRUPE	3.0e-14	62.50	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013818mg PE=4 SV=1	[more]

BLAST of CSPI05G13260 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G14430.1	4.8e-16	62.96	unknown protein	[more]

BLAST of CSPI05G13260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195717\|gb\|KGN50894.1\|	9.1e-33	100.00	hypothetical protein Csa_5G315390 [Cucumis sativus]	[more]
gi\|778702065\|ref\|XP_011655131.1\|	9.1e-33	100.00	PREDICTED: uncharacterized protein LOC101207856 [Cucumis sativus]	[more]
gi\|659126333\|ref\|XP_008463128.1\|	3.8e-31	95.89	PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]	[more]
gi\|657978932\|ref\|XP_008381408.1\|	2.3e-15	64.06	PREDICTED: uncharacterized protein LOC103444259 [Malus domestica]	[more]
gi\|694389981\|ref\|XP_009370592.1\|	6.6e-15	61.19	PREDICTED: uncharacterized protein LOC103959934 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G13260.1	CSPI05G13260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37223	FAMILY NOT NAMED	coord: 24..72 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G13260	Csa5G315390	Cucumber (Chinese Long) v2	cpicuB255
CSPI05G13260	MELO3C025073	Melon (DHL92) v3.5.1	cpimeB345
CSPI05G13260	ClCG01G008330	Watermelon (Charleston Gray)	cpiwcgB390
CSPI05G13260	Lsi09G008800	Bottle gourd (USVL1VR-Ls)	cpilsiB331
CSPI05G13260	MELO3C025073.2	Melon (DHL92) v3.6.1	cpimedB335
CSPI05G13260	CsaV3_5G020250	Cucumber (Chinese Long) v3	cpicucB304
CSPI05G13260	BhiUN384G50	Wax gourd	cpiwgoB489
CSPI05G13260	Cucsa.173490	Cucumber (Gy14) v1	cgycpiB273
CSPI05G13260	CmaCh15G007740	Cucurbita maxima (Rimu)	cmacpiB299
CSPI05G13260	CmaCh04G022570	Cucurbita maxima (Rimu)	cmacpiB761
CSPI05G13260	CmoCh04G023600	Cucurbita moschata (Rifu)	cmocpiB751
CSPI05G13260	CmoCh15G008040	Cucurbita moschata (Rifu)	cmocpiB290
CSPI05G13260	Cp4.1LG13g05500	Cucurbita pepo (Zucchini)	cpecpiB190
CSPI05G13260	Cp4.1LG01g19600	Cucurbita pepo (Zucchini)	cpecpiB443
CSPI05G13260	CsGy5G013360	Cucumber (Gy14) v2	cgybcpiB239
CSPI05G13260	Carg01429	Silver-seed gourd	carcpiB0866
CSPI05G13260	Carg18299	Silver-seed gourd	carcpiB0563

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G13260	Melon (DHL92) v3.5.1	cpimeB356
CSPI05G13260	Watermelon (97103) v1	cpiwmB429
CSPI05G13260	Watermelon (97103) v2	cpiwmbB361