CSPI05G11520 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAACCGCAACGTGTTCTTCTATGTCTGTTCCTTTTCTATAAAAAAAAAAATTGTAAGAAACCAAAACAGTTCTCTCTGCGCCCATAAACAAAGCACGAGCACAATGGATTTGGATGAACATGAGCTACTTTGATTTACCCATCAACAAGAAGAAGAAGAAGAAGAACAAAAACAACAAGGGAACAATATAAACAACAGATTCTCTCGATTTCTGTAAGAGGAAGCCTTTTAATCCATGGAACTCCCCAATCCCACTAATCCAATGGCTTCCTCTTCCAACCCCACTCCCCCATTTCGCGGTTCCTTCCACCGTCGAGCTCATTCCGAGGTCCATTTCCGGATTCCTGACGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGAAGATCTGGGCTTTGAGGATGATCTCTTGTGTACTTTCATGGACATCGAGAAGATCGGATCTAAAATCGACAATGGGTCTTCGTCAAATCCTGCAATGGCTGCCGGTGGTACTGGGGGGGTGAATGTTGAAGGGGAGAAAATCTCACGCCCCAGGCATCGTCATAGCAATTCTGCTGATGGGTCTTCCATTTTGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACTATTGATCCTAAACGTGCCAAGAGGTTTTGTACTATTCTATTCTAATGTGCTTCAATTTGTGTTTAGGTTCTCCAATTGCAATGTGTTTTGTGTTAATCTCATTCTTGAAATGTGTTGCTTGTTGATTGGACTTTTGATTCATGGCTGGAAGATCGAGTTAAGGAATGCCTTTTCTCCTAGGACAGTACTTTGTGTTTTCATTTGAGTAAATGGGAATTAGTTCAATTCTGATGGTTGGATGAAGTTTTAATGATTGATTAAATGTTGGGGGGATTTAGCTATATGTATATGTATAGACTGGTTTTAGTTGGTTAATATGAGAGATTCTTGTGATATTAGATCTTACTAGGTTTTTGACAACCAGATATTGTAGGCCATTATGTGGGGTTTGAACCTACTCTTCAAAATTTCAAAGCATCTTTAACCATATTTCCATTTTCCTTAATGACCATTAGGCCAGCTCATAGTGGTTCTTCAAGTTCAATAATTTTAAATCAGGTCCCTACCTTATCAATCAAGGAAAGGGAAAAACACGTATTATGTTAATCGATATCTTCTTAATCAGCTGTCTCAGTCTGTGTCGTCTTTTTCTGTTTCTAAAACTTTTACAACTAGTTTTAATCTGTTCTTGGTACTTCACTTGCAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCAACAACTCTCTCTGCACAGCTCACATTGTATCAGGTTTTAATTTTTCACCTATCTCATCTTTTGTTCTTACAACGATCAAGGTCACATTACATATTTACAGTCTGAAAGTAGATATAACATTGGGAAAGCTATTTTCTTGCCATTATTTGCCTCGTACACTTCAGTGGAAACACTAGATGTCCCTTGCTATGAAATTTCTTAGCTTTTGTTGGTAAGAGATGTAATACATTTGCATTAAAGTTATAGGAGTAACCACTTTAAAAGATTGATGAAAAAAAGTAGAGAAATCATAACAGTCCCTATGCAAAGTGGTGAGTGGGAAGAGGACTTAATACATTCTCCCAAAATTATCAGTAAAGATAAAAGAAGAAAAGCTCTACACTAATCTTTAAAAGTGCTGTTGTTTCTGAAAGTTATTTTCTTACATCTGTGTGTAACTTTTTTTTTACTATAAAAATTTCTTCTGGAAATGAACAAATAAATTTTGGTTGGAGAAAAACTTGAGAGTTTGGAATTTTTGTACCTATTTCTTCACCATAAACAATGTTCATTGCATTAAAAGGGCTGTTTTCAACCAAATGAACCAAACTATTTACAAATATAGCAAAATATTGCAATCTATTTGTGATAGACGGTGATAGACTACTATATGTGTTTATCTATAGGCTGTTGCATTGCATATAGATGGTAACATTTTACTATATTTGTCAATATTTTACGCAGTTTTGTTATTTAAAACAATATCCCTTGTCATTTAAGTTAGATGAATTTTCAATTATGATTTTGTACATTGATTTTCCGTCTCTATTACTTCTGAAAAGTTGCTTTTGGAATTTGGGGGAGGCAATGGAGCCCTCCCCTGTCCAAGCTTTATTTATTTATCATTGTTGTTACTATTATTATTGTTGAACATATTCTTTTAAAAGTTAGATGTAATTATTTTTCTATCATGGAGAAATTTAATTTCTTACCAAATTCTTGAAACAAAATTGAACTTTTGTAGTTTTATTTTAATCATTTAAAATTTATATTTTGACAACTTTTCATGTTCTCTTTACTAAACATAGATATTCTTTTTTTGAAAAACAGTTTTGGACCATAAACTTCTATAAAAGGTAATTATTTAGTCTTTGAACTTTACTAAATTATAGTTTGATTCTTTAAACTTTGGTTTATAACAATTTGGTAAATTTGTAAAATTTTAAGTCACATATTTCAAATTTGTAACAATTTAATATGTAAGGTGAAAAACCCATCAAAGTTTAGTGTCAATTTTTATTGTGTAACAATTATAGTTTTCATAGATTATGAACACATTTGGTCCTTATAATCAATTTATTGACCTACATTCTTGTGGCCATATTATGCCATTTTTGCTATTATTGATTCTTCACCTCAGATGCTTTTTATTTTTGCATGAGCATTTTAGTGTCGATTTTTACTTTTCGGTTTGTTTATCTGCTCTAATGTGGTTTTTCGATGATTTAGTGTGGTTATTTGGGCTATTTGGTTGGAGAGAAATAGCCAAATTCTTAGGGACATCTTCTCAACTAAAGCCCTTTACAGAACTGCAAGGGTTTCGAGCTGGTGTACATTTTGTAACCTTTCCTCTTCTAAAATTTTAAATCTAAAACCTTTAGGGTGTAGGGGCGAGGGCTTGAGATGTTTAGAGTTGCCCTCTAGGATATAGGGTTCTATCCCCCGGGTGGAAAACTTAGGTTATGTTTGATAACTATTTTTTTTATATCCGTGAGTGTTTGGATCAGCCTACGCATGCCTTGACTAATGTCACCAGACAACATGCCTGACCCTACAACATTGGGTGTCAAGAAAATTCATAGGAAATTAATTCATAAGTAGGTAACCACGATGGATTGAACTCATAGCCTCTTATTTAGTTCTTGAAACTATTCTCATTTTTTACCACTAGACCAACCCATGATGGTTCAAGTTGATAAAGATTTCATTTATAATTTTCTGTTTTTAAACATTCTACATGTTTTCTTACGATGAGTTCATCTCTTAAAGATATATTTGAAATTATGAGTCATATTCCAAAAGAAAATAAATTTTAAAAGCTACATTTTTAGTCTTCAAAACTTGGCTTAGACTTTCTTAATAATTTTAGAATTAGATAACAGGGCCAGCTAAATTTTCAAAAATCAAATAGCTATCAGTTGACCTCCAGTAATTGATAGAACTCAATAATTTATCTCTTTTTGTCTCTTATAATTACCTTCTAATACCCTGGTTATGAAAGAAAACCCTTTGTTTTCCACAATAAAATGGACAAGGGCAGCTAATCTGAAACTTGCTGAATGTATACTCACATTGACAATTACGGTTTTAGCTTTTCCTGAAAAAGCAATAGGCGAAAGTTCCAATATGATTATAGAGTTGACTTTTTCTCTAAAATTTGAAATATGATTGTAGAGTCACTTTTATTTCATATATTTTGCCTTTTTGTTTAGTGGCCTTCACTTAAAAAGGTTGTTGATGCTTTTAGAGGAGGTAATGATGGAGATCGGAGACTTTCCTTTTTTTTCATGGAAAGGAAAGAGGATACAATTATGGGAATTACTTAAAGGTTTGTTAGCAAATAGAAAAAGTGAAAAAGGTGGTAACACTGAGGTATGATTGTATAGTGTCCTAGTAGAGTTTCCAAAAGAGTTCTTAGTCCATCCATCACATCACTTACCTTTTCTTTCTTTTTTCCTTCTTCCTTGTCTTTTTTTAAGTTCGACCTCCACTTTCTCCTCATAAACACCAAAATCTACCATCACTGTGGCTTCCCTTTTCCCCATATCTTCTTCTAAGTATCATTTCTTCATCTTACTCGATCACAAAAATCACGTCATAAAGAAACTAGAGTGCTGACATGAATATTGTCAAAATTACAATAAGAATAACATTACAAAATTATATTACTACCACTACTATTTTTTTAAATTCTAACTGCTACTCAACATCCCATTTTGTTAAAAGCTTTATTGACGAGCATGTTACAGTCATGTGCTAATCCTAGTTCCCCAAGTTATAACTTGTCATCTAACTTTCATATATTGTGATGTTTGTGAAGTGAGCATGGTTAGGAGTTTGTCACGAGCATATGAATGAAAACAGGCTTCACAGTAGTTTTCCTTTGATCATTTCATCTTTTGTTCATGTTCTTTCTTTCAGAGAGATACCACTGGGCTTTCAACTGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATTTACGCGATGGTACGTATCCACGTATACCCTGTCTATGTATTATTATTGACCCGACCTGACCCTCTTTGCTTAGCTTTTAGGTGTCATGAATAATGTGATATCCACTTCTTCACATCTGCTATTGGTTTTTCTTTCTTTATTCATAACTTTCACTTGTCCAAGTAGGGTCTGTTTCAAATCCACCTACTTAGAAGCTGCCTTATCTAGATTTTGATGATCTTGAATAAATGTTTGAATTTAAGAGCTGTTTGATGTCTATATTTGCACATTAATCTTGTCATCCCCATGCTTCATCTTCACCTTAGGTTGCATGAGAAAGTCTTGCCGTTGGACCAGCTTTTATTGTGCATTATAATGATATTCTTGCTTTACGGTTGAACGAAAGACAATGCAATCTAATTTTTTTTTATGACTTTTTGTAATATACAGCTCTAAATGAAGCTTTGAAAAAAGAAGTTGAGCGGCTCAAGATTGCGACGGGAGAAGTAATGACAGCAACGGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCAATCTTCCTTTTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGATGACGATGCAAAGACCCCAAGTTCAACCATTCCATTCTAATTTACCAAACCCACATCAGGCTTTGTTTGTTGCATCGCACCAGCCTCATGCCTTAACAGAAATGTTTCAGCAGGATCCTATTACCCGATTGCAGGGTCTTGATATTGGTAGCAGAGGCACAGAAATAAAGCCCGAAGGCCCCTCGATATCGGTCAGTGAAAGTAGCAGCACATTTTAACCCAATTTTTTTGCCAACCTATGCTTCAACCTCCCAGTGAAAATATGGCTTGTTCATAGATTGACCCTGTTGACAGAAATTTTTTTTCCCACATTTGTTCGTTGTTCGTTCTTTTCTTCATTAATTCGCGTTCGGGGAACTCGACGGGTGAGACAAAATTATTCTTGTGATAGAAAGAGAAGCTCTCTCGGCTGGAATTCTGTTTCATAGTCCCATTTGGCATTTGCTGTCATTAAAAAAAAAACATTGTTTCTTTTGGTAAAGTAATTTGTTCATTCTTCATTATTCAACTCATAGCTTGGTCCATAGTTGCAGCTATATAGATTAGTTTGAATATTGAAAGATCCTGAGAATG ATGGAACTCCCCAATCCCACTAATCCAATGGCTTCCTCTTCCAACCCCACTCCCCCATTTCGCGGTTCCTTCCACCGTCGAGCTCATTCCGAGGTCCATTTCCGGATTCCTGACGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGAAGATCTGGGCTTTGAGGATGATCTCTTGTGTACTTTCATGGACATCGAGAAGATCGGATCTAAAATCGACAATGGGTCTTCGTCAAATCCTGCAATGGCTGCCGGTGGTACTGGGGGGGTGAATGTTGAAGGGGAGAAAATCTCACGCCCCAGGCATCGTCATAGCAATTCTGCTGATGGGTCTTCCATTTTGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACTATTGATCCTAAACGTGCCAAGAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCAACAACTCTCTCTGCACAGCTCACATTGTATCAGAGAGATACCACTGGGCTTTCAACTGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATTTACGCGATGCTCTAAATGAAGCTTTGAAAAAAGAAGTTGAGCGGCTCAAGATTGCGACGGGAGAAGTAATGACAGCAACGGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCAATCTTCCTTTTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGATGACGATGCAAAGACCCCAAGTTCAACCATTCCATTCTAATTTACCAAACCCACATCAGGCTTTGTTTGTTGCATCGCACCAGCCTCATGCCTTAACAGAAATGTTTCAGCAGGATCCTATTACCCGATTGCAGGGTCTTGATATTGGTAGCAGAGGCACAGAAATAAAGCCCGAAGGCCCCTCGATATCGGTCAGTGAAAGTAGCAGCACATTTTAA ATGGAACTCCCCAATCCCACTAATCCAATGGCTTCCTCTTCCAACCCCACTCCCCCATTTCGCGGTTCCTTCCACCGTCGAGCTCATTCCGAGGTCCATTTCCGGATTCCTGACGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGAAGATCTGGGCTTTGAGGATGATCTCTTGTGTACTTTCATGGACATCGAGAAGATCGGATCTAAAATCGACAATGGGTCTTCGTCAAATCCTGCAATGGCTGCCGGTGGTACTGGGGGGGTGAATGTTGAAGGGGAGAAAATCTCACGCCCCAGGCATCGTCATAGCAATTCTGCTGATGGGTCTTCCATTTTGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACTATTGATCCTAAACGTGCCAAGAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGGAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCAACAACTCTCTCTGCACAGCTCACATTGTATCAGAGAGATACCACTGGGCTTTCAACTGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATTTACGCGATGCTCTAAATGAAGCTTTGAAAAAAGAAGTTGAGCGGCTCAAGATTGCGACGGGAGAAGTAATGACAGCAACGGATTCGTATAACTTTGGAATGCCTCAAGTTTCATATCCCCAATCTTCCTTTTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGATGACGATGCAAAGACCCCAAGTTCAACCATTCCATTCTAATTTACCAAACCCACATCAGGCTTTGTTTGTTGCATCGCACCAGCCTCATGCCTTAACAGAAATGTTTCAGCAGGATCCTATTACCCGATTGCAGGGTCTTGATATTGGTAGCAGAGGCACAGAAATAAAGCCCGAAGGCCCCTCGATATCGGTCAGTGAAAGTAGCAGCACATTTTAA
BLAST of CSPI05G11520 vs. Swiss-Prot
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2) HSP 1 Score: 308.5 bits (789), Expect = 9.0e-83 Identity = 196/359 (54.60%), Postives = 233/359 (64.90%), Query Frame = 1
BLAST of CSPI05G11520 vs. Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 7.0e-51 Identity = 147/342 (42.98%), Postives = 190/342 (55.56%), Query Frame = 1
BLAST of CSPI05G11520 vs. Swiss-Prot
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.0e-49 Identity = 150/338 (44.38%), Postives = 188/338 (55.62%), Query Frame = 1
BLAST of CSPI05G11520 vs. Swiss-Prot
Match: VIP1_ARATH (Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.2e-35 Identity = 103/191 (53.93%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of CSPI05G11520 vs. Swiss-Prot
Match: BZP61_ARATH (Basic leucine zipper 61 OS=Arabidopsis thaliana GN=BZIP61 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 8.1e-15 Identity = 49/93 (52.69%), Postives = 63/93 (67.74%), Query Frame = 1
BLAST of CSPI05G11520 vs. TrEMBL
Match: A0A0A0KMA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G221950 PE=4 SV=1) HSP 1 Score: 665.6 bits (1716), Expect = 3.2e-188 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1
BLAST of CSPI05G11520 vs. TrEMBL
Match: E5GB68_CUCME (B-zip DNA binding protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 1.6e-179 Identity = 330/335 (98.51%), Postives = 332/335 (99.10%), Query Frame = 1
BLAST of CSPI05G11520 vs. TrEMBL
Match: F6HC81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02900 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-111 Identity = 237/364 (65.11%), Postives = 277/364 (76.10%), Query Frame = 1
BLAST of CSPI05G11520 vs. TrEMBL
Match: M5XK21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007645mg PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 5.1e-109 Identity = 232/346 (67.05%), Postives = 265/346 (76.59%), Query Frame = 1
BLAST of CSPI05G11520 vs. TrEMBL
Match: B9S4E6_RICCO (Transcription factor RF2b, putative OS=Ricinus communis GN=RCOM_0689740 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 4.8e-107 Identity = 234/358 (65.36%), Postives = 266/358 (74.30%), Query Frame = 1
BLAST of CSPI05G11520 vs. TAIR10
Match: AT2G40620.1 (AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 332.4 bits (851), Expect = 3.3e-91 Identity = 217/375 (57.87%), Postives = 252/375 (67.20%), Query Frame = 1
BLAST of CSPI05G11520 vs. TAIR10
Match: AT1G06850.1 (AT1G06850.1 basic leucine-zipper 52) HSP 1 Score: 259.6 bits (662), Expect = 2.7e-69 Identity = 175/362 (48.34%), Postives = 225/362 (62.15%), Query Frame = 1
BLAST of CSPI05G11520 vs. TAIR10
Match: AT2G31370.3 (AT2G31370.3 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 198.7 bits (504), Expect = 5.7e-51 Identity = 150/338 (44.38%), Postives = 188/338 (55.62%), Query Frame = 1
BLAST of CSPI05G11520 vs. TAIR10
Match: AT1G06070.1 (AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 195.3 bits (495), Expect = 6.3e-50 Identity = 153/357 (42.86%), Postives = 194/357 (54.34%), Query Frame = 1
BLAST of CSPI05G11520 vs. TAIR10
Match: AT1G43700.1 (AT1G43700.1 VIRE2-interacting protein 1) HSP 1 Score: 149.1 bits (375), Expect = 5.2e-36 Identity = 103/191 (53.93%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of CSPI05G11520 vs. NCBI nr
Match: gi|449457399|ref|XP_004146436.1| (PREDICTED: transcription factor RF2b [Cucumis sativus]) HSP 1 Score: 665.6 bits (1716), Expect = 4.6e-188 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1
BLAST of CSPI05G11520 vs. NCBI nr
Match: gi|659114206|ref|XP_008456950.1| (PREDICTED: transcription factor RF2b [Cucumis melo]) HSP 1 Score: 652.1 bits (1681), Expect = 5.3e-184 Identity = 338/344 (98.26%), Postives = 340/344 (98.84%), Query Frame = 1
BLAST of CSPI05G11520 vs. NCBI nr
Match: gi|307135840|gb|ADN33710.1| (b-zip DNA binding protein [Cucumis melo subsp. melo]) HSP 1 Score: 636.7 bits (1641), Expect = 2.3e-179 Identity = 330/335 (98.51%), Postives = 332/335 (99.10%), Query Frame = 1
BLAST of CSPI05G11520 vs. NCBI nr
Match: gi|1009121648|ref|XP_015877571.1| (PREDICTED: transcription factor RF2b [Ziziphus jujuba]) HSP 1 Score: 421.0 bits (1081), Expect = 2.0e-114 Identity = 244/354 (68.93%), Postives = 271/354 (76.55%), Query Frame = 1
BLAST of CSPI05G11520 vs. NCBI nr
Match: gi|225448679|ref|XP_002280180.1| (PREDICTED: transcription factor RF2b isoform X1 [Vitis vinifera]) HSP 1 Score: 411.0 bits (1055), Expect = 2.1e-111 Identity = 237/364 (65.11%), Postives = 277/364 (76.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |