CSPI05G10010 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G10010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 8473975 .. 8474163 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTCGAACGCGGTTTTCCCGATGCTGTTGTCGACGTCTCAAAGTGCGTCGACAATGGTTGTTCCGACATGATCTGCTTCGACCTTCCCCAACGTGTGTGTGCATCGGCTATTCCTACCATTTCTTGTAGTGTCTTCTCAATTTCTCTTCCTCGTGCGTCGTTCATCTCCTCCTCTTCTCAATAG

mRNA sequence

ATGGTTTTCGAACGCGGTTTTCCCGATGCTGTTGTCGACGTCTCAAAGTGCGTCGACAATGGTTGTTCCGACATGATCTGCTTCGACCTTCCCCAACGTGTGTGTGCATCGGCTATTCCTACCATTTCTTGTAGTGTCTTCTCAATTTCTCTTCCTCGTGCGTCGTTCATCTCCTCCTCTTCTCAATAG

Coding sequence (CDS)

ATGGTTTTCGAACGCGGTTTTCCCGATGCTGTTGTCGACGTCTCAAAGTGCGTCGACAATGGTTGTTCCGACATGATCTGCTTCGACCTTCCCCAACGTGTGTGTGCATCGGCTATTCCTACCATTTCTTGTAGTGTCTTCTCAATTTCTCTTCCTCGTGCGTCGTTCATCTCCTCCTCTTCTCAATAG
Homology
[Close]
BLAST of CSPI05G10010 vs. TrEMBL
Match: A0A0A0KQC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G187850 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 1 

Query: 1  MVFERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS 60
          MV ERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS
Sbjct: 1  MVSERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS 60

Query: 61 SQ 63
          SQ
Sbjct: 61 SQ 62

[Close]
BLAST of CSPI05G10010 vs. NCBI nr
Match: gi|700195410|gb|KGN50587.1| (hypothetical protein Csa_5G187850 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-25
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 1 

Query: 1  MVFERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS 60
          MV ERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS
Sbjct: 1  MVSERGFPDAVVDVSKCVDNGCSDMICFDLPQRVCASAIPTISCSVFSISLPRASFISSS 60

Query: 61 SQ 63
          SQ
Sbjct: 61 SQ 62

The following BLAST results are available for this feature:
BLAST of CSPI05G10010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G10010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQC4_CUCSA8.4e-2698.39Uncharacterized protein OS=Cucumis sativus GN=Csa_5G187850 PE=4 SV=1[more]
BLAST of CSPI05G10010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G10010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195410|gb|KGN50587.1|1.2e-2598.39hypothetical protein Csa_5G187850 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G10010.1CSPI05G10010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G10010Csa5G187850Cucumber (Chinese Long) v2cpicuB240
CSPI05G10010CsaV3_5G008490Cucumber (Chinese Long) v3cpicucB285
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G10010Melon (DHL92) v3.6.1cpimedB352
CSPI05G10010Melon (DHL92) v3.6.1cpimedB385
CSPI05G10010Melon (DHL92) v3.6.1cpimedB406
CSPI05G10010Cucumber (Gy14) v2cgybcpiB032
CSPI05G10010Cucumber (Gy14) v2cgybcpiB181
CSPI05G10010Cucumber (Gy14) v2cgybcpiB226
CSPI05G10010Cucumber (Gy14) v2cgybcpiB283
CSPI05G10010Silver-seed gourdcarcpiB0102
CSPI05G10010Silver-seed gourdcarcpiB0296
CSPI05G10010Silver-seed gourdcarcpiB0706
CSPI05G10010Silver-seed gourdcarcpiB1038
CSPI05G10010Cucumber (Chinese Long) v3cpicucB257
CSPI05G10010Cucumber (Chinese Long) v3cpicucB276
CSPI05G10010Cucumber (Chinese Long) v3cpicucB305
CSPI05G10010Watermelon (97103) v2cpiwmbB381
CSPI05G10010Watermelon (97103) v2cpiwmbB390
CSPI05G10010Watermelon (97103) v2cpiwmbB394
CSPI05G10010Watermelon (97103) v2cpiwmbB412
CSPI05G10010Wax gourdcpiwgoB494
CSPI05G10010Wax gourdcpiwgoB504
CSPI05G10010Wax gourdcpiwgoB515
CSPI05G10010Wax gourdcpiwgoB517
CSPI05G10010Wild cucumber (PI 183967)cpicpiB154
CSPI05G10010Wild cucumber (PI 183967)cpicpiB179
CSPI05G10010Cucumber (Gy14) v1cgycpiB057
CSPI05G10010Cucumber (Gy14) v1cgycpiB196
CSPI05G10010Cucumber (Gy14) v1cgycpiB258
CSPI05G10010Cucurbita maxima (Rimu)cmacpiB302
CSPI05G10010Cucurbita maxima (Rimu)cmacpiB685
CSPI05G10010Cucurbita maxima (Rimu)cmacpiB756
CSPI05G10010Cucurbita maxima (Rimu)cmacpiB757
CSPI05G10010Cucurbita maxima (Rimu)cmacpiB774
CSPI05G10010Cucurbita moschata (Rifu)cmocpiB294
CSPI05G10010Cucurbita moschata (Rifu)cmocpiB746
CSPI05G10010Cucurbita moschata (Rifu)cmocpiB747
CSPI05G10010Cucurbita moschata (Rifu)cmocpiB677
CSPI05G10010Cucurbita moschata (Rifu)cmocpiB763
CSPI05G10010Cucumber (Chinese Long) v2cpicuB215
CSPI05G10010Cucumber (Chinese Long) v2cpicuB256
CSPI05G10010Melon (DHL92) v3.5.1cpimeB360
CSPI05G10010Melon (DHL92) v3.5.1cpimeB391
CSPI05G10010Melon (DHL92) v3.5.1cpimeB408
CSPI05G10010Watermelon (Charleston Gray)cpiwcgB361
CSPI05G10010Watermelon (Charleston Gray)cpiwcgB404
CSPI05G10010Watermelon (Charleston Gray)cpiwcgB420
CSPI05G10010Watermelon (97103) v1cpiwmB448
CSPI05G10010Watermelon (97103) v1cpiwmB374
CSPI05G10010Watermelon (97103) v1cpiwmB399
CSPI05G10010Watermelon (97103) v1cpiwmB435
CSPI05G10010Cucurbita pepo (Zucchini)cpecpiB079
CSPI05G10010Cucurbita pepo (Zucchini)cpecpiB194
CSPI05G10010Cucurbita pepo (Zucchini)cpecpiB437
CSPI05G10010Cucurbita pepo (Zucchini)cpecpiB438
CSPI05G10010Cucurbita pepo (Zucchini)cpecpiB457
CSPI05G10010Bottle gourd (USVL1VR-Ls)cpilsiB345
CSPI05G10010Bottle gourd (USVL1VR-Ls)cpilsiB365
CSPI05G10010Bottle gourd (USVL1VR-Ls)cpilsiB366