CSPI05G09400 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G09400
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	DNA polymerase zeta catalytic subunit, putative
Location	Chr5 : 7919567 .. 7922106 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAGACATATTGTGATTTATTTGAGCCTCTAAAAAAATTAGTATGGGCTGAGAGCCCAAATGAGTTCTTCACCCTTGACCTGAGGGAAGACGAGGCTGAGGTTAACCTTCCCTTTGAAACTCATTTACACATTTGGCTCAAGGATTACTCTAATTATCTTACATGAAAATTGTATAATGGATGTCCTAGATCAATTTATTAAGTAGTACTTCACTGTGGCTTCAGAATAAAATAATCAATTGTCATTCTTAAACTCTTGCAGGTCACATCTTACTAACTTAAGGCATTGAACTTCCTGCTATAATGAAAGTTTCAATTGGACTGTATTTGGCACCGCATAATTGCCTTTCTGCTCGTATTGAGAGATCGAGGATGAGCACTCAACCCAGTGCTAATAGATATTATAATTTATAAAACACTTCTTTTGGCCGATCATATATTGGAAATTAGTAAAGGAAGGAAGGAGAATCTGCACAAAATATAATATTTACTGTTCATATGCTGGAAAGTTACGAGACATTAAAAAGCTGATAAATCAAATCAAATCAAACAGTGTTGTTATTTTTATTTGTAACCAAATTATACTTTTAATAATCCTTTCAGCCATGTTTCTGTTTAGGTATTGAGATTTTAAGATGAACCTTTTCTAATTCCCAAATTTAATTGTTCTAAACGGTCTATAAATCAATTTGACTTGGATCATAATCCAATGAAAATAAATCAATTTCTCTTTGTTTATTTGTTTTGTACATTCATGCGCTTGAGCCTCGGTTTAAATTCATAAACAAAGTCCTAATTTCATTGACAAGACTATCGTAAGTCGTAATTCATAAACTGTAAATTTTTAAATCTTTCCTTTCCAGATGAAAGTTAGGCAAGACTATAATAACCACAGCTACATAAAATATTATTTAAAAACCTAAATTAATTATAGTAAACATTATTTTAAAACTTCTTATTTACTATCATATTAATTATTTTACATTCATTACTTTCTTTTTGTTATTTGGTATGATGTTTACTATTTAATTTATATTTTAATTGATGTTTACTATTTAATTTATTTTTCAAATTAAAATAATTCACAAATCACACAGGTATGGTTATAATCCAAACTAAAATAATTTAGATTTGAAATACAAATTATCATAGGATAGAGGGGTAAGGAGAGGGAGTGGCATCCACGTTCAAACTCAAACTCAGATCGAAAGCGAATCGACACTGATAGACAAAAAAAGGAAGAAGATTCTATATGCTGAAGCTGACAAGAAATTTGTAGACTTCCTCTTCACAATACTTGCTCTTCCTGTTGGAACCATGGTTAATTTGGTATCCAGTAGCAGCAACCCAGACAACAAACCCATGGCTGCAGCTGGTTCTCTGTAAAGCCTCTACCGCAGCGTGGAGAGCTTAAGTGTTAACAATTTTGATGCACACCACAACAAAGAGAGCCTCCTGAATCCTCAGCTCCCAACATCCACTGCTGAATCCCATATTCAAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGGCCTATTACACGTGTCAAATTCATTATGATCGTTCTAATCTTGTTATTACCGAAAACTGTCGTACTTTTACTGCGACAAGTGGCACGAAATGTCTAAGATGCGGCAAATCCATGACGACTATTGCAAGTTATGTACATGGAATGGGTGAAGCAAAGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTAACGTACATGGTGATGGATGATCTCAGTGTTAAACCCATGTCGTGTTCCACTATGTCCATCATTTCGGTCTTGAAGGAGTTGAATGTGGAGAATGTTGACCATGTATCACAAGCTTATTCATTTCAACGTCCAACATGTATGTGATTATTGAATTCTAAATTTTGTGCTCCATATGCTCATAAACGCTTCATTTGATTATTGTATTTGATTCTTAAAACTTTCAATTTGATATCTACTTAGGTTTTTAGATTTTTATTTGGCCATATAGGTCTAGGGTGACTCTTTTGGATTTCAGATATGCCCCCAATGTGATTCTTTTGGTTTCACTATTTTTGATGATTGGATCTCAATTTTCTTTGGACCGAGTAATATGGATGAAGCTTTGTGGGCTGATTTCATAGTTGAAAGTATTGGATTTCAACTCAAAATCAATTTGCAATAGAAGACTTGATTGATTTCTGAAACGTGGTATACTCAATAATTTAAACATTGTTTAGATTTTAGATTTGTCAAAGACTCATAACAAGTAGCACACCATATTCAATGCTACATAAATATAAATATATATTAAGCACTTGTGTCTATATATATATAAAAATATATACACGCACACTAGGATCAAATCAGGCAGATCTGAAAGCTAATCGAAGAGATTTGTAATTTTTTGTTTGAGATTTTAATTAATAAATTTATATTGATTTGGTCTGGTTATGTTGGGTTTATGTAGGCTGTGAAGTTGCTAAGGGCTTCTCTTCACTCATCGACTGTTCTAACCGACCTCTTTCTTTCCAGCATTGA

mRNA sequence

ATGAATGAGACATATTGTGATTTATTTGAGCCTCTAAAAAAATTAGTATGGGCTGAGAGCCCAAATGAGTTCTTCACCCTTGACCTGAGGGAAGACGAGGCTGAGGATAGAGGGGTAAGGAGAGGGAGTGGCATCCACGTTCAAACTCAAACTCAGATCGAAAGCGAATCGACACTGATAGACAAAAAAAGGAAGAAGATTCTATATGCTGAAGCTGACAAGAAATTTGTAGACTTCCTCTTCACAATACTTGCTCTTCCTGTTGGAACCATGGTTAATTTGGTATCCAGTAGCAGCAACCCAGACAACAAACCCATGGCTGCAGCTGAGAGCCTCCTGAATCCTCAGCTCCCAACATCCACTGCTGAATCCCATATTCAAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGGCCTATTACACGTGTCAAATTCATTATGATCGTTCTAATCTTGTTATTACCGAAAACTGTCGTACTTTTACTGCGACAAGTGGCACGAAATGTCTAAGATGCGGCAAATCCATGACGACTATTGCAAGTTATGTACATGGAATGGGTGAAGCAAAGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTAACGTACATGGTGATGGATGATCTCAGTGTTAAACCCATGTCGTGTTCCACTATGTCCATCATTTCGGTCTTGAAGGAGTTGAATGTGGAGAATGTTGACCATATATGCCCCCAATGTGATTCTTTTGGTTTCACTATTTTTGATGATTGGATCTCAATTTTCTTTGGACCGAGTAATATGGATGAAGCTTTGTGGGCTGATTTCATAGTTGAAAGCTGTGAAGTTGCTAAGGGCTTCTCTTCACTCATCGACTGTTCTAACCGACCTCTTTCTTTCCAGCATTGA

Coding sequence (CDS)

ATGAATGAGACATATTGTGATTTATTTGAGCCTCTAAAAAAATTAGTATGGGCTGAGAGCCCAAATGAGTTCTTCACCCTTGACCTGAGGGAAGACGAGGCTGAGGATAGAGGGGTAAGGAGAGGGAGTGGCATCCACGTTCAAACTCAAACTCAGATCGAAAGCGAATCGACACTGATAGACAAAAAAAGGAAGAAGATTCTATATGCTGAAGCTGACAAGAAATTTGTAGACTTCCTCTTCACAATACTTGCTCTTCCTGTTGGAACCATGGTTAATTTGGTATCCAGTAGCAGCAACCCAGACAACAAACCCATGGCTGCAGCTGAGAGCCTCCTGAATCCTCAGCTCCCAACATCCACTGCTGAATCCCATATTCAAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGGCCTATTACACGTGTCAAATTCATTATGATCGTTCTAATCTTGTTATTACCGAAAACTGTCGTACTTTTACTGCGACAAGTGGCACGAAATGTCTAAGATGCGGCAAATCCATGACGACTATTGCAAGTTATGTACATGGAATGGGTGAAGCAAAGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTAACGTACATGGTGATGGATGATCTCAGTGTTAAACCCATGTCGTGTTCCACTATGTCCATCATTTCGGTCTTGAAGGAGTTGAATGTGGAGAATGTTGACCATATATGCCCCCAATGTGATTCTTTTGGTTTCACTATTTTTGATGATTGGATCTCAATTTTCTTTGGACCGAGTAATATGGATGAAGCTTTGTGGGCTGATTTCATAGTTGAAAGCTGTGAAGTTGCTAAGGGCTTCTCTTCACTCATCGACTGTTCTAACCGACCTCTTTCTTTCCAGCATTGA

Homology

[Close]

BLAST of CSPI05G09400 vs. TrEMBL
Match: A0A0A0KS57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180330 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 41  RGSGIHVQTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSN 100
           RGSGIH+QTQTQIESES  IDKKRKKILYAEADKKFVDFLFTILALPVGTMV LVSSSSN
Sbjct: 32  RGSGIHIQTQTQIESESIAIDKKRKKILYAEADKKFVDFLFTILALPVGTMVKLVSSSSN 91

Query: 101 PDNKPMAAAESL 113
           PDNKPMAAA SL
Sbjct: 92  PDNKPMAAAGSL 103

[Close]

BLAST of CSPI05G09400 vs. TrEMBL
Match: A0A0A0KQ74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180310 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.5e-24
Identity = 91/221 (41.18%), Postives = 128/221 (57.92%), Query Frame = 1


Query: 47  VQTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDN--K 106
           + TQT++ +   +ID K+K+ILYAEAD KFVDFLF+IL+LP+GT++ L+S++ +      
Sbjct: 51  ILTQTEVINLKLMIDNKQKRILYAEADNKFVDFLFSILSLPIGTVLKLLSTAPSSPTIVT 110

Query: 107 PMAAA----------------------ESLLNPQLPTSTAESHIQSLLQIQSPSSSQPKA 166
           PM  +                      ESLLNP LP     S ++ LL   S S+S+PK 
Sbjct: 111 PMIGSLSSLYRSANSMKTNYFESNRKKESLLNPHLP-----SKLKYLLG-SSSSASEPK- 170

Query: 167 YYTCQIHYDRSNLVITENCRTFTATSGTKCLRCGKSMTTIASYVH-GMGEAKPVVGGYVK 226
           Y+TC    D           +F+     +C +C + MTT A YVH  +G+      GYV 
Sbjct: 171 YFTCSSCPD-----------SFSNGYFARCTKCSEIMTTEALYVHYDLGD------GYVV 230

Query: 227 G-GNAVTYMVMDDLSVKPMSCSTMSIISVLKELNVENVDHI 242
           G G  VTYMVMDDL+VKP++ S+MS IS+L +LNVE++ HI
Sbjct: 231 GAGGMVTYMVMDDLTVKPIT-SSMSTISMLTQLNVEDIRHI 246

[Close]

BLAST of CSPI05G09400 vs. TrEMBL
Match: A0A0D9UWW0_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.3e-19
Identity = 78/226 (34.51%), Postives = 122/226 (53.98%), Query Frame = 1


Query: 49  TQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSS--------- 108
           + T + S   LID K +++L+AEA K  VDFLF++LALPVGT V L+   S         
Sbjct: 7   SNTSVLSMKLLIDTKAQRVLFAEASKDVVDFLFSLLALPVGTAVKLLGKDSMVGCVGNLY 66

Query: 109 -------NPDNKPMAAAESLLNPQLPTSTAESHIQSLLQIQSPSSSQPKAYYTCQIHYDR 168
                  +   +  A+ ++LL+P + +  A +   S+L++ +PS+ Q K+++ C  +Y+ 
Sbjct: 67  ISIEKLDDMYVQAGASKDALLSPTVLSPAASN--SSVLRLPAPSTEQNKSFFRCGYNYNN 126

Query: 169 SNLVITENCRTF-TATSGTKCLRCGKSMTTIASYVHG------MGEAKPVVGGYVKGGNA 228
            N     +CR++ T TSGTKC  C   MTT   YV G         A     G+V+G   
Sbjct: 127 YN----SSCRSYVTDTSGTKCPSCSNQMTTECYYVEGDPAQKAQNAAAEGAKGFVQG--I 186

Query: 229 VTYMVMDDLSVKPMSCSTMSIISVLKELNVENVDHICPQCDSFGFT 252
           VTY VMDDL+V PM  S++S I++L    V+++  +  +    G+T
Sbjct: 187 VTYTVMDDLTVSPM--SSISSITLLNTFAVKDLGALKEKTVQLGYT 222

[Close]

BLAST of CSPI05G09400 vs. TrEMBL
Match: A0A0J8D275_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024460 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-18
Identity = 81/215 (37.67%), Postives = 110/215 (51.16%), Query Frame = 1


Query: 54  ESEST-----LIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVS------------ 113
           ESES      LID K  K+L+AE  K+FVDFLF I++LPVGT++ L+S            
Sbjct: 4   ESESNVKLKLLIDTKANKVLFAEGGKEFVDFLFHIMSLPVGTIIKLLSVNGMVGCLGSLY 63

Query: 114 ---SSSNPDN-KPMAAAESLLNPQLPTSTAESHIQSLLQIQSPSSSQPKAYYTCQIHYDR 173
               S N D  +P    +S+L P+ P S        LL +    +S  K +Y C  +Y+ 
Sbjct: 64  KSIESLNTDYFQPNLTKDSVLKPKAPVSV------PLLSLNDAPTSTNKQFYRCS-YYNG 123

Query: 174 SNLVITENCRTFTATSGTKCLRCGKSMTTIASYV---------HGMGEAKPVVGGYVKGG 233
           SN +   +CR      GT C  C + MT   SYV                  VGGYVKG 
Sbjct: 124 SNCIYYTDCR------GTACRSCSREMTIQLSYVAPTASQNNATSSSSGTGSVGGYVKG- 183

Query: 234 NAVTYMVMDDLSVKPMSCSTMSIISVLKELNVENV 239
             VTYMVMD+L VKPM  ST+S I+++ + +V++V
Sbjct: 184 -VVTYMVMDNLEVKPM--STISGITLMNKFHVKDV 201

[Close]

BLAST of CSPI05G09400 vs. TrEMBL
Match: A0A0E0MRH4_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-17
Identity = 79/220 (35.91%), Postives = 116/220 (52.73%), Query Frame = 1


Query: 55  SESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMV-------------NLVSSSSNP 114
           S   L+D   +++L+AEA K  VDFLF++LALPVGT V             NL +S    
Sbjct: 9   SMKLLVDTNAQRVLFAEASKDVVDFLFSLLALPVGTAVKLLGKDSMVGCVGNLYASVEKL 68

Query: 115 DN---KPMAAAESLLNPQLPTSTAESHIQSLLQIQSPSSSQPKAYYTCQIHYDRSNLVIT 174
           D    +P A+  +LL+P + +  A S+  S+L++ +PSSSQPK++++C+  YD    V  
Sbjct: 69  DGTYVQPGASKNALLSPVVLSPAASSNT-SVLRLPAPSSSQPKSFFSCR-SYDCFYYV-- 128

Query: 175 ENCRTFTATSGTKCLRCGKSMTTIASYVHGMGEAKPVVG-------GYVKGGNAVTYMVM 234
                 T  SG KC  CG  MTT  +Y       K           G+V+G   VTY VM
Sbjct: 129 ------TDVSGVKCPSCGNQMTTACTYAAPTAAQKLQAAAAEGAGKGFVQG--IVTYTVM 188

Query: 235 DDLSVKPMSCSTMSIISVLKELNVENVDHICPQCDSFGFT 252
           DDL+V PM  S++S I++L    V+++  +  Q    G+T
Sbjct: 189 DDLTVSPM--SSISSITLLNTFAVKDLGALKEQTVQLGYT 214

[Close]

BLAST of CSPI05G09400 vs. TAIR10
Match: AT3G09110.1 (AT3G09110.1 Protein of unknown function (DUF674))

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 53/211 (25.12%), Postives = 84/211 (39.81%), Query Frame = 1


Query: 59  LIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDNKPMAAAESLLNPQL- 118
           LID+++ +++ AEA K FVD L ++L LP+GT+V L+    NP +  +    +L      
Sbjct: 15  LIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCLHNLYKSVAD 74

Query: 119 -----------------PTSTAESHIQSL-LQIQSPSSSQPKAYYTCQIHYDRSNLVITE 178
                            P S   SH + L L I    +++   ++ C       N V TE
Sbjct: 75  MDVDNFESQACKHFLLHPRSAKGSHGRDLKLNIDDTEATK---FFVC------PNFVSTE 134

Query: 179 NCRTFTATSGTKCLRCGKSMTTIASYVHGMGEAKPVVGGYVKGGNAVTYMVMDDLSVKPM 238
            CR   +   T   RCG SM       H     +      V      ++++ DDL V   
Sbjct: 135 ACRKLFSNVSTMKCRCGSSM-------HREIPVEEQQADGVFPSCRTSFVITDDLKVALN 194

Query: 239 SCSTMSIISVLKELNVENVDHICPQCDSFGF 251
           S     +++VL +      D +       GF
Sbjct: 195 SMGL--VLNVLNDFGYSGFDKLQEMLIDVGF 207

[Close]

BLAST of CSPI05G09400 vs. NCBI nr
Match: gi|778708355|ref|XP_004147724.2| (PREDICTED: uncharacterized protein LOC101207769 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 81/184 (44.02%), Postives = 114/184 (61.96%), Query Frame = 1


Query: 59  LIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDNKPMAAAE-SLLNPQL 118
           +IDKKRK++LY EADK+F+DFLFTILALPVGT++ L S+      +PM     S L   +
Sbjct: 12  VIDKKRKRVLYGEADKEFIDFLFTILALPVGTVIKLQST------EPMLPGPLSNLYCSM 71

Query: 119 PTSTAESHIQSLLQIQSPSSSQPKAYYTCQIHYDRSNLVITENCRTFTATSGTKCLRCGK 178
            +    ++ +   ++Q  +   PK YY C  +Y + +     +C + ++T GTKC  CG 
Sbjct: 72  DSLNTINYFEPKRRLQ--NLLNPKTYYLCNNNYRKQS-----SCHSVSSTHGTKCPNCGG 131

Query: 179 SMTTIASYVHGMGEAKPVVGGYVKGGNAVTYMVMDDLSVKPMSCSTMSIISVLKELNVEN 238
            MT   +YV+   E K + GGYV G     YMVMDDL+VKPM+ S+MS ISVL ELNV++
Sbjct: 132 YMTINLAYVYVDEEEKLIEGGYVTGMG--KYMVMDDLTVKPMAYSSMSTISVLNELNVDD 180

Query: 239 VDHI 242
           +  I
Sbjct: 192 ISQI 180

[Close]

BLAST of CSPI05G09400 vs. NCBI nr
Match: gi|700195344|gb|KGN50521.1| (hypothetical protein Csa_5G180330 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 41  RGSGIHVQTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSN 100
           RGSGIH+QTQTQIESES  IDKKRKKILYAEADKKFVDFLFTILALPVGTMV LVSSSSN
Sbjct: 32  RGSGIHIQTQTQIESESIAIDKKRKKILYAEADKKFVDFLFTILALPVGTMVKLVSSSSN 91

Query: 101 PDNKPMAAAESL 113
           PDNKPMAAA SL
Sbjct: 92  PDNKPMAAAGSL 103

[Close]

BLAST of CSPI05G09400 vs. NCBI nr
Match: gi|659123380|ref|XP_008461634.1| (PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 6.8e-26
Identity = 93/214 (43.46%), Postives = 122/214 (57.01%), Query Frame = 1


Query: 48  QTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDN---- 107
           Q+Q ++ S   +IDKK K+ILYAEADK F+DFLFT+L+LP  T++ L+S S         
Sbjct: 10  QSQNKV-SLKLVIDKKAKRILYAEADKTFIDFLFTMLSLPFATLMKLISISPISTTMFWS 69

Query: 108 ----------------KPMAAAESLLNPQLPTSTAESHIQSLLQIQSPSS-SQPKAYYTC 167
                           KP    E LLNP+       S + ++ QI+S SS + P  YYTC
Sbjct: 70  LGNLYSSVKTLDIKYFKPNETKEKLLNPK-------SQLDTVFQIESSSSLAPPTNYYTC 129

Query: 168 QIHYDRSNLVITENCRTFTATSGTKCLRCGKSMTTIASYVHGMGEAKPVVGG--YVKGGN 227
              Y             FT+T  T+C +C KSM   A+YV+G+GE KP  GG  YV+GG 
Sbjct: 130 CGSY-------------FTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG- 189

Query: 228 AVTYMVMDDLSVKPMSCSTMSIISVLKELNVENV 239
            V YMVMDDL+VKP+  S+MS I VLKEL V++V
Sbjct: 190 -VRYMVMDDLTVKPI-FSSMSTILVLKELEVDDV 199

[Close]

BLAST of CSPI05G09400 vs. NCBI nr
Match: gi|659123378|ref|XP_008461633.1| (PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 6.8e-26
Identity = 93/214 (43.46%), Postives = 122/214 (57.01%), Query Frame = 1


Query: 48  QTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDN---- 107
           Q+Q ++ S   +IDKK K+ILYAEADK F+DFLFT+L+LP  T++ L+S S         
Sbjct: 10  QSQNKV-SLKLVIDKKAKRILYAEADKTFIDFLFTMLSLPFATLMKLISISPISTTMFWS 69

Query: 108 ----------------KPMAAAESLLNPQLPTSTAESHIQSLLQIQSPSS-SQPKAYYTC 167
                           KP    E LLNP+       S + ++ QI+S SS + P  YYTC
Sbjct: 70  LGNLYSSVKTLDIKYFKPNETKEKLLNPK-------SQLDTVFQIESSSSLAPPTNYYTC 129

Query: 168 QIHYDRSNLVITENCRTFTATSGTKCLRCGKSMTTIASYVHGMGEAKPVVGG--YVKGGN 227
              Y             FT+T  T+C +C KSM   A+YV+G+GE KP  GG  YV+GG 
Sbjct: 130 CGSY-------------FTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG- 189

Query: 228 AVTYMVMDDLSVKPMSCSTMSIISVLKELNVENV 239
            V YMVMDDL+VKP+  S+MS I VLKEL V++V
Sbjct: 190 -VRYMVMDDLTVKPI-FSSMSTILVLKELEVDDV 199

[Close]

BLAST of CSPI05G09400 vs. NCBI nr
Match: gi|700195340|gb|KGN50517.1| (hypothetical protein Csa_5G180310 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 91/221 (41.18%), Postives = 128/221 (57.92%), Query Frame = 1


Query: 47  VQTQTQIESESTLIDKKRKKILYAEADKKFVDFLFTILALPVGTMVNLVSSSSNPDN--K 106
           + TQT++ +   +ID K+K+ILYAEAD KFVDFLF+IL+LP+GT++ L+S++ +      
Sbjct: 51  ILTQTEVINLKLMIDNKQKRILYAEADNKFVDFLFSILSLPIGTVLKLLSTAPSSPTIVT 110

Query: 107 PMAAA----------------------ESLLNPQLPTSTAESHIQSLLQIQSPSSSQPKA 166
           PM  +                      ESLLNP LP     S ++ LL   S S+S+PK 
Sbjct: 111 PMIGSLSSLYRSANSMKTNYFESNRKKESLLNPHLP-----SKLKYLLG-SSSSASEPK- 170

Query: 167 YYTCQIHYDRSNLVITENCRTFTATSGTKCLRCGKSMTTIASYVH-GMGEAKPVVGGYVK 226
           Y+TC    D           +F+     +C +C + MTT A YVH  +G+      GYV 
Sbjct: 171 YFTCSSCPD-----------SFSNGYFARCTKCSEIMTTEALYVHYDLGD------GYVV 230

Query: 227 G-GNAVTYMVMDDLSVKPMSCSTMSIISVLKELNVENVDHI 242
           G G  VTYMVMDDL+VKP++ S+MS IS+L +LNVE++ HI
Sbjct: 231 GAGGMVTYMVMDDLTVKPIT-SSMSTISMLTQLNVEDIRHI 246

The following BLAST results are available for this feature:

BLAST of CSPI05G09400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G09400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS57_CUCSA	1.2e-26	93.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180330 PE=4 SV=1	[more]
A0A0A0KQ74_CUCSA	7.5e-24	41.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180310 PE=4 SV=1	[more]
A0A0D9UWW0_9ORYZ	4.3e-19	34.51	Uncharacterized protein OS=Leersia perrieri PE=4 SV=1	[more]
A0A0J8D275_BETVU	1.6e-18	37.67	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024460 PE=4 S...	[more]
A0A0E0MRH4_ORYRU	1.1e-17	35.91	Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1	[more]

BLAST of CSPI05G09400 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G09110.1	2.8e-06	25.12	Protein of unknown function (DUF674)	[more]

BLAST of CSPI05G09400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708355\|ref\|XP_004147724.2\|	1.8e-26	44.02	PREDICTED: uncharacterized protein LOC101207769 [Cucumis sativus]	[more]
gi\|700195344\|gb\|KGN50521.1\|	1.8e-26	93.06	hypothetical protein Csa_5G180330 [Cucumis sativus]	[more]
gi\|659123380\|ref\|XP_008461634.1\|	6.8e-26	43.46	PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo]	[more]
gi\|659123378\|ref\|XP_008461633.1\|	6.8e-26	43.46	PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo]	[more]
gi\|700195340\|gb\|KGN50517.1\|	1.1e-23	41.18	hypothetical protein Csa_5G180310 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007750	DUF674

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G09400.1	CSPI05G09400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007750	Protein of unknown function DUF674	PFAM	PF05056	DUF674	coord: 118..242 score: 8.3E-11coord: 58..110 score: 1.2
None	No IPR available	PANTHER	PTHR33103	FAMILY NOT NAMED	coord: 59..239 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G09400	Csa5G180330	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G09400	CsGy5G006730	Cucumber (Gy14) v2	cgybcpiB226

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G09400	Melon (DHL92) v3.6.1	cpimedB347
CSPI05G09400	Melon (DHL92) v3.6.1	cpimedB350
CSPI05G09400	Melon (DHL92) v3.6.1	cpimedB406
CSPI05G09400	Cucumber (Gy14) v2	cgybcpiB182
CSPI05G09400	Cucumber (Gy14) v2	cgybcpiB230
CSPI05G09400	Silver-seed gourd	carcpiB0300
CSPI05G09400	Silver-seed gourd	carcpiB0706
CSPI05G09400	Silver-seed gourd	carcpiB0900
CSPI05G09400	Cucumber (Chinese Long) v3	cpicucB278
CSPI05G09400	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G09400	Cucumber (Chinese Long) v3	cpicucB292
CSPI05G09400	Watermelon (97103) v2	cpiwmbB393
CSPI05G09400	Watermelon (97103) v2	cpiwmbB412
CSPI05G09400	Watermelon (97103) v2	cpiwmbB432
CSPI05G09400	Wax gourd	cpiwgoB498
CSPI05G09400	Wax gourd	cpiwgoB518
CSPI05G09400	Wild cucumber (PI 183967)	cpicpiB153
CSPI05G09400	Wild cucumber (PI 183967)	cpicpiB175
CSPI05G09400	Cucumber (Gy14) v1	cgycpiB057
CSPI05G09400	Cucumber (Gy14) v1	cgycpiB258
CSPI05G09400	Cucurbita maxima (Rimu)	cmacpiB312
CSPI05G09400	Cucurbita maxima (Rimu)	cmacpiB685
CSPI05G09400	Cucurbita maxima (Rimu)	cmacpiB756
CSPI05G09400	Cucurbita maxima (Rimu)	cmacpiB757
CSPI05G09400	Cucurbita moschata (Rifu)	cmocpiB304
CSPI05G09400	Cucurbita moschata (Rifu)	cmocpiB746
CSPI05G09400	Cucurbita moschata (Rifu)	cmocpiB747
CSPI05G09400	Cucurbita moschata (Rifu)	cmocpiB677
CSPI05G09400	Cucumber (Chinese Long) v2	cpicuB245
CSPI05G09400	Cucumber (Chinese Long) v2	cpicuB235
CSPI05G09400	Melon (DHL92) v3.5.1	cpimeB357
CSPI05G09400	Melon (DHL92) v3.5.1	cpimeB360
CSPI05G09400	Melon (DHL92) v3.5.1	cpimeB408
CSPI05G09400	Watermelon (Charleston Gray)	cpiwcgB359
CSPI05G09400	Watermelon (Charleston Gray)	cpiwcgB404
CSPI05G09400	Watermelon (Charleston Gray)	cpiwcgB420
CSPI05G09400	Watermelon (97103) v1	cpiwmB373
CSPI05G09400	Watermelon (97103) v1	cpiwmB399
CSPI05G09400	Watermelon (97103) v1	cpiwmB435
CSPI05G09400	Cucurbita pepo (Zucchini)	cpecpiB437
CSPI05G09400	Cucurbita pepo (Zucchini)	cpecpiB438
CSPI05G09400	Bottle gourd (USVL1VR-Ls)	cpilsiB346
CSPI05G09400	Bottle gourd (USVL1VR-Ls)	cpilsiB356
CSPI05G09400	Bottle gourd (USVL1VR-Ls)	cpilsiB366