CSPI05G08380 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G08380
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 7106190 .. 7106699 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTTTGATGTTGCAAGTAGCCATGGCGTTGAAATTTCAACGGAACACAAGGAAGCCTCGATCGCTTAAGATAGCATGGCCAGATTACAAACTCAAGACGTCAAGACCAAGTATGTAAGTTCTAAAGCTCAGATTTGGACATCAGAATGTTGGGATGACTGAAAATTTTTCTTTTTTGCTTTTTGAATATTACCAATCAAATATGTGTTTTAAATATGCTTTCAACCATTCTTGTTATTAGGAAAAATCTACAAGTCATGCACGTCAACTGCACAGTGTAGAAGGTTATGATTTATAGAAAATAAACTTATGGGTATTATTCAGAATGACTGAATGTAATTAAACCTTACAATTCTTTGTTCTCTCTTAGAACCTAGAACTCTTCAAGTCTTATTTTGATGTGCTTTTTTTCTCTCATTCTGCAGGCTTGGGTACTGTACTGAAGCTTGCATCTCATGATCGATTGCTGCAGTTTCCTTTGCTTACGGTCTTAAGGATACGTTAG

mRNA sequence

ATGGATCCTTTGATGTTGCAAGTAGCCATGGCGTTGAAATTTCAACGGAACACAAGGAAGCCTCGATCGCTTAAGATAGCATGGCCAGATTACAAACTCAAGACGTCAAGACCAAGCTTGGGTACTGTACTGAAGCTTGCATCTCATGATCGATTGCTGCAGTTTCCTTTGCTTACGGTCTTAAGGATACGTTAG

Coding sequence (CDS)

ATGGATCCTTTGATGTTGCAAGTAGCCATGGCGTTGAAATTTCAACGGAACACAAGGAAGCCTCGATCGCTTAAGATAGCATGGCCAGATTACAAACTCAAGACGTCAAGACCAAGCTTGGGTACTGTACTGAAGCTTGCATCTCATGATCGATTGCTGCAGTTTCCTTTGCTTACGGTCTTAAGGATACGTTAG
Homology
[Close]
BLAST of CSPI05G08380 vs. TrEMBL
Match: A0A0A0KPU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173450 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV 60
          MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV
Sbjct: 1  MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV 60

Query: 61 LRI 64
          LRI
Sbjct: 61 LRI 63

[Close]
BLAST of CSPI05G08380 vs. NCBI nr
Match: gi|700195240|gb|KGN50417.1| (hypothetical protein Csa_5G173450 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV 60
          MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV
Sbjct: 1  MDPLMLQVAMALKFQRNTRKPRSLKIAWPDYKLKTSRPSLGTVLKLASHDRLLQFPLLTV 60

Query: 61 LRI 64
          LRI
Sbjct: 61 LRI 63

The following BLAST results are available for this feature:
BLAST of CSPI05G08380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G08380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPU2_CUCSA5.1e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173450 PE=4 SV=1[more]
BLAST of CSPI05G08380 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G08380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195240|gb|KGN50417.1|7.3e-26100.00hypothetical protein Csa_5G173450 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G08380.1CSPI05G08380.1mRNA