CSPI05G06160 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGCTACACGCTTCAATCAATAAGAAATTTTTTGCTTAGACTAATGGAATATAGACTCATTACAAATTCGTAATTTGGTTAAATTAAACAAAAGAGTACTTGTCATTTAAACGTAATAGCTAATATATATATAGCCTTGGAATGATGAAGACGTACAAAACAATGTACATCGAATTGTCTTCTTTTTCATTAAGCTCAGCCGGCAACTAACACAGTACACAGCCATGGCAGACCAAAATAGAACCATATAAAACATATTCCCCCTCCATATTGTTAGCAGATATATGTTACCAAAATCCACCCTATTGCCGACGGGCGAATGGGGTGGCGCAGTGGTTGTTGTAAGGTGTTCGCGATAGTGGCCATTTTATTACCTTGTGTTTTGGGAAAGGAATATGTAGTTGGAGATGAACATGGGTGGAACATCAACTTTGACTACCAAGCTTGGGCTCAGGGGAAGCTTTTCTTTGTTGGGGACTCACTCAGTAAGATAATTAATTATATGATCATCTTAAAACAATTAAATAGCTTTTTCTATAACTTCCATGTTTTTAAATCACTCATAAACATTCAATTAATTTACGGGTTGGTAACTACATGGTTTGTACTTCAAATCCAAATACTCGGATTGTATTGAAAACGGTTATATAAAGGATAGTCTCACAATATAATACCTTTTAATTATATCTTTAAAATAAACCTTAACTACATTTTTGTTTAAACCTATGTTGACCATAACATAAACTTAATAGATATTATTTGGTAATTATTTTGTTTTTGTTTTTCTTTCAAATTATGTTTGTTTTCTGACAATTTTTTACCTATACGTTTCAAATTTTCTAAATAAACGTGTGAAGTCTTAATCAATTTCTAAAATCAAAAACTACTTTTTTACTGGTTTTAAATTTAAGCTTTGTATTTGAAAACAACTCTTTTGAAACAATAAACAGATGAAATTAGTTACTGTGTGTTTATAAGCTTAATTTTCATCAGTTTAAAACCAAATGATTTTATAAACACTACCTTCCTTTTTAAGAGTTTATGGTTTCAACCGGCAGTATTCAACTACCAGCAAGAGAGGCACAACGTATTCAAAGTTAACGGCACAGCCTTCAAAGAGTGCACTCCGCCGGCCAACGTTCCACCGTTAACGACCGGAAGTGACCGAATTCAGTTGAAATCAGCAGGAAAAAAATGGTATATCTGCGGTATCGGCTTCCACTGTACTGCCGGACAAAGGCTCGCCATTACAGTGCTGGACAAAGGAGCTGGTGTTCCTTCTCCGTCTCCATCACCACGGCTTCTTCCAACACCGCCAGCCTCCCTTCCGACCAACTCAACCAATGCACCCCCACCCGCACCATCAACCGCCACAAAAGCGGCTGTTTCCGTCTTCCTGATGGTGTTTACTATTCTGCTCGCTGGGATATTATGATCAAAGCTCTTGATATATATATATTTTTTTAACTTCACTCTCTTGTTTTATTTTCATTTGCGTTTGAGATTGCTTGTTTCTCTTTTATATTTATTTCCAGTGTGTTTAGGGGAGAGGTTGGAAAACAATAAATTATTATAATTGTGGTAACTGATCAATTTTGTTTTGATATTA ATGGGGTGGCGCAGTGGTTGTTGTAAGGTGTTCGCGATAGTGGCCATTTTATTACCTTGTGTTTTGGGAAAGGAATATGTAGTTGGAGATGAACATGGGTGGAACATCAACTTTGACTACCAAGCTTGGGCTCAGGGGAAGCTTTTCTTTGTTGGGGACTCACTCATATTCAACTACCAGCAAGAGAGGCACAACGTATTCAAAGTTAACGGCACAGCCTTCAAAGAGTGCACTCCGCCGGCCAACGTTCCACCGTTAACGACCGGAAGTGACCGAATTCAGTTGAAATCAGCAGGAAAAAAATGGTATATCTGCGGTATCGGCTTCCACTGTACTGCCGGACAAAGGCTCGCCATTACAGTGCTGGACAAAGGAGCTGGTGTTCCTTCTCCGTCTCCATCACCACGGCTTCTTCCAACACCGCCAGCCTCCCTTCCGACCAACTCAACCAATGCACCCCCACCCGCACCATCAACCGCCACAAAAGCGGCTGTTTCCGTCTTCCTGATGGTGTTTACTATTCTGCTCGCTGGGATATTATGA ATGGGGTGGCGCAGTGGTTGTTGTAAGGTGTTCGCGATAGTGGCCATTTTATTACCTTGTGTTTTGGGAAAGGAATATGTAGTTGGAGATGAACATGGGTGGAACATCAACTTTGACTACCAAGCTTGGGCTCAGGGGAAGCTTTTCTTTGTTGGGGACTCACTCATATTCAACTACCAGCAAGAGAGGCACAACGTATTCAAAGTTAACGGCACAGCCTTCAAAGAGTGCACTCCGCCGGCCAACGTTCCACCGTTAACGACCGGAAGTGACCGAATTCAGTTGAAATCAGCAGGAAAAAAATGGTATATCTGCGGTATCGGCTTCCACTGTACTGCCGGACAAAGGCTCGCCATTACAGTGCTGGACAAAGGAGCTGGTGTTCCTTCTCCGTCTCCATCACCACGGCTTCTTCCAACACCGCCAGCCTCCCTTCCGACCAACTCAACCAATGCACCCCCACCCGCACCATCAACCGCCACAAAAGCGGCTGTTTCCGTCTTCCTGATGGTGTTTACTATTCTGCTCGCTGGGATATTATGA
BLAST of CSPI05G06160 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20 Identity = 63/172 (36.63%), Postives = 88/172 (51.16%), Query Frame = 1
BLAST of CSPI05G06160 vs. Swiss-Prot
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.1e-18 Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of CSPI05G06160 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1
BLAST of CSPI05G06160 vs. Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 2.6e-17 Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = 1
BLAST of CSPI05G06160 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 8.5e-16 Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 1
BLAST of CSPI05G06160 vs. TrEMBL
Match: A0A0A0KKQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157370 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 4.0e-97 Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 1
BLAST of CSPI05G06160 vs. TrEMBL
Match: W9S6P0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023169 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38 Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
BLAST of CSPI05G06160 vs. TrEMBL
Match: M5WD35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016298mg PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 5.2e-36 Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 1
BLAST of CSPI05G06160 vs. TrEMBL
Match: M5WBX6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017082mg PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35 Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 1
BLAST of CSPI05G06160 vs. TrEMBL
Match: M5WEA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015224mg PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35 Identity = 82/177 (46.33%), Postives = 105/177 (59.32%), Query Frame = 1
BLAST of CSPI05G06160 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24 Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 1
BLAST of CSPI05G06160 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein) HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19 Identity = 51/171 (29.82%), Postives = 84/171 (49.12%), Query Frame = 1
BLAST of CSPI05G06160 vs. TAIR10
Match: AT5G20230.1 (AT5G20230.1 blue-copper-binding protein) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-18 Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = 1
BLAST of CSPI05G06160 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein) HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18 Identity = 60/190 (31.58%), Postives = 90/190 (47.37%), Query Frame = 1
BLAST of CSPI05G06160 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein) HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18 Identity = 60/168 (35.71%), Postives = 81/168 (48.21%), Query Frame = 1
BLAST of CSPI05G06160 vs. NCBI nr
Match: gi|778708266|ref|XP_004147604.2| (PREDICTED: stellacyanin-like [Cucumis sativus]) HSP 1 Score: 362.1 bits (928), Expect = 5.8e-97 Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 1
BLAST of CSPI05G06160 vs. NCBI nr
Match: gi|764580140|ref|XP_011463792.1| (PREDICTED: stellacyanin-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 167.5 bits (423), Expect = 2.1e-38 Identity = 74/129 (57.36%), Postives = 94/129 (72.87%), Query Frame = 1
BLAST of CSPI05G06160 vs. NCBI nr
Match: gi|703143710|ref|XP_010108083.1| (hypothetical protein L484_023169 [Morus notabilis]) HSP 1 Score: 166.4 bits (420), Expect = 4.6e-38 Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1
BLAST of CSPI05G06160 vs. NCBI nr
Match: gi|645266664|ref|XP_008238716.1| (PREDICTED: mavicyanin-like [Prunus mume]) HSP 1 Score: 163.3 bits (412), Expect = 3.9e-37 Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = 1
BLAST of CSPI05G06160 vs. NCBI nr
Match: gi|595850916|ref|XP_007210012.1| (hypothetical protein PRUPE_ppa016298mg [Prunus persica]) HSP 1 Score: 159.1 bits (401), Expect = 7.4e-36 Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |