CSPI05G06060 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G06060
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBasic helix-loop-helix transcription factor
LocationChr5 : 5503463 .. 5504737 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTGGATCCCCAATTTGGAGCTATAAATAAAGGGATATTTAGATTTCCAAAACATTGTGCCATTTCCAAAAACTTCCTCACCATTCTCCTCCTCTCTTCCTCTCTTCCTCTCTTAAACCCATTTGATATTAAAAGAAAAAAAAATTATTCTATGGACTTAGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCTAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGTAAAACTCATCGGTGCCTCATCAAATGTTATTTTATTATATATATATATATATACTTTGAAAGTAGATGAAAAAGAAAGATTTTGTGAGAGTTCGAGAAAAACAAAAACTATCATGATAATATAGAATTTCAAAATCCCCCATTATTTGGCCTATTGCATTTCACAAGAGAACTTAAAAGAAAAATTAAATAAAAATGGTTATAATATTTGTATGTGAAAAATTACAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCGGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAAACTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAAAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAAATTAGAGTAACACCAGTAGTGTTTCTATATATTTGTTATTTATATTATTGTTTTTTTCTTACTTCATGTTTGATTTATTCGACCAATTACATGGTTTTACTTTAATTAGATTTGATAATTGTGAGC

mRNA sequence

ATGGACTTAGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCTAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCGGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAAACTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAAAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAA

Coding sequence (CDS)

ATGGACTTAGATTGTATACAATCTCCATTCCCTTTTGATCAAGTAGATGAGTTATTTCCACTCCCTTCTCTTTCCCCTATACACCTTTCTGTTGCTGATCACCCTCCATTGATCGCTTCCATCAACAACACCAACAGAAATATCTCCGAAAAGCCAAAAAAAGGTCGTCGGCGGAAGTCCCCTAACACTTCGGCCGATATTGAGGACGAGAACCCGAACCCAAACGAACATAAAAAGAAGAAGATTATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACGCCGCTCTTCGCTCACTTCTCCCGGTGGAATATCTCAAGGGAAAGCGATCGATATGTGATCACATGCATGAGACAGTGAAATACATACAACACATGCAAACCAAGATTCAAATGCTGAGAAACAAGAGAGATGAGCTTAAAAAGAATATTGAAGATGGTGAGGATTCCGGGAACATTACCACAATCGAAACATTAAACTCCTCAAAAAGGGATAGTGTGCTAGTGATGCCAAGATCATGTGGAGGAGTTCAAATTCTTCTAGACACAGCTACACACCATAGGCTTCCACTTTCCAATCTTATCAAATTTCTAATTACTCAAAATCTTCAAATCATTAGTTGTCATTCTACTAGGAAGAACGACAGGTTCCTCCACACTATTGAAACTGAAGCTGCTGTCGATGTTGAAACAATTGATATGTCGGAACTACAAAATAAATTGACTAACTTGGAATATTTTCCATTAGATTAA
Homology
[Close]
BLAST of CSPI05G06060 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.8e-23
Identity = 73/203 (35.96%), Postives = 118/203 (58.13%), Query Frame = 1 

Query: 54  KGRRRKSPNTSADIED-------ENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 113
           KG +R+ P +SA            +   +  KKKK++HRD+ERQRRQEM+TL+A LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 114 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNI--TTIETL 173
           P++Y+KGKR++ DH++  V +I+  + +I+ L  +RDEL +    G  S      T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 174 NSSKRDSVLVMPRSCG-GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFL 233
             S+  +V+V P   G  V +  +++    LPLS +++ +  + L+++S  +TR NDR +
Sbjct: 130 GKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLM 189

Query: 234 HTIETEAAVDVETIDMSELQNKL 247
           HTI+ E       ID+  LQ KL
Sbjct: 190 HTIQVEVN-SFGCIDLLWLQQKL 211

[Close]
BLAST of CSPI05G06060 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22
Identity = 75/208 (36.06%), Postives = 119/208 (57.21%), Query Frame = 1 

Query: 47  NISEKPKKGRRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 106
           N S  PKK R +       D           K+KK++HR++ERQRRQEM+ L+A+LRS L
Sbjct: 2   NPSNNPKKTRHQSHMPQERD--------ETKKEKKLLHRNIERQRRQEMAILFASLRSQL 61

Query: 107 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIED-----GEDSGNITTI 166
           P++Y+KGKR++ DH++  V +I+  QT+I+ L  +RDELK+ I D     G  SG+    
Sbjct: 62  PLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGS---- 121

Query: 167 ETLNSSKRDSVLVMPRSC-GGVQILLDTATH--HRLPLSNLIKFLITQNLQIISCHSTRK 226
               SS+ +   VM + C  G ++++ +        PLS +++ L  Q L++IS  + R 
Sbjct: 122 ---GSSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARV 181

Query: 227 NDRFLHTIETEAAVDVETIDMSELQNKL 247
           N+R ++TI+ E     +  D++ LQ KL
Sbjct: 182 NERLMYTIQVEVN-SFDCFDLAWLQQKL 193

[Close]
BLAST of CSPI05G06060 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.5e-21
Identity = 71/199 (35.68%), Postives = 115/199 (57.79%), Query Frame = 1 

Query: 58  RKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 117
           R++  T+  + +     +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS 
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSS 112

Query: 118 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSK-----RDSV 177
            DH+ E V YI+ +Q KI+ +  KRD +K++I      G   +I +L SS        ++
Sbjct: 113 ADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEF-SIRSLASSTCSCVGDTNI 172

Query: 178 LVMPRSC-GGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRKNDRFLHTIETEA 237
            V+ R C  G++I++     H   LS++++ L   Q   I+SC STR +  F+HTI +E 
Sbjct: 173 AVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 232

Query: 238 AVDVETIDMSELQNKLTNL 250
              +E +  SELQ K+  +
Sbjct: 233 EEGIE-VYFSELQEKIIKI 249

[Close]
BLAST of CSPI05G06060 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-21
Identity = 71/211 (33.65%), Postives = 121/211 (57.35%), Query Frame = 1 

Query: 56  RRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKR 115
           ++R   + +    + N N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKR
Sbjct: 50  KKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKR 109

Query: 116 SICDHMHETVKYIQHMQTKIQMLRNKRDELKK----------NIEDGEDSGNITTIETLN 175
           S  DH+ + V YI+ +Q KI+ L  KR+ +KK           IE+   S + +   TL+
Sbjct: 110 STSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLS 169

Query: 176 SS------KRDSVLVMPRSCGGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRK 235
           SS      K  +V+V P   G   I+      ++  LS++++ L   Q   ++SC S R+
Sbjct: 170 SSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARR 229

Query: 236 NDRFLHTIETEAAVDVETIDMSELQNKLTNL 250
             RF+HTI ++   D + I++ EL++K+  +
Sbjct: 230 QQRFMHTIVSQVE-DGKQINILELKDKIMTM 259

[Close]
BLAST of CSPI05G06060 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.2e-19
Identity = 63/176 (35.80%), Postives = 107/176 (60.80%), Query Frame = 1 

Query: 80  KKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTKIQMLR 139
           +K++HR+ ERQRRQEM++LYA+LRSLLP+ ++KGKRS  D ++E V YI+++Q KI+ L 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 140 NKRDE---LKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSC-GGVQILLDTATHHRLP 199
            +RD+   L +    G  +G+      + S K     V+ R C  GV+I+L +      P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH---VVVRQCLVGVEIMLSSRCCGGQP 121

Query: 200 -LSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMSELQNKLTNLE 251
             S++++ L    L +++  S+  +DR ++TI+ E       ID++EL+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]
BLAST of CSPI05G06060 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 7.8e-139
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06060 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 1.9e-137
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDS NITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIE+EAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06060 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66
Identity = 155/263 (58.94%), Postives = 190/263 (72.24%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK   + ++ G + T ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRAR 180

Query: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVET 240
              GG+Q++LDT T HRL LSN+++ LI Q  +I+SC S + NDRFLHTIE++ AV  +T
Sbjct: 181 DGSGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240

Query: 241 ----IDMSELQNKLTNLEYFPLD 256
               ID+S+LQ  L NLEY PLD
Sbjct: 241 NSPLIDISDLQYMLANLEYCPLD 260

[Close]
BLAST of CSPI05G06060 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 135/260 (51.92%), Postives = 178/260 (68.46%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           M++   +SPF FD  ++L PLPSL     S    PPL    +N    +S+KPK GRR+K 
Sbjct: 1   MEMFNAESPFSFDVGEDLVPLPSLPS---SSVISPPL----DNYGNRVSQKPKNGRRKKP 60

Query: 61  -PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICD 120
            PNT  D +  + N +E KKKKIIHRDVERQRRQEMS+LY  LRSLLP+EYLKGKRSI D
Sbjct: 61  LPNTCND-DGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISD 120

Query: 121 HMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSC 180
           HM ETV YIQHMQ +IQ L++KR  L++ +          T ETLNSS+R S +V  +  
Sbjct: 121 HMQETVSYIQHMQRRIQQLKDKRGTLRE-LASQTTVAIAGTTETLNSSERASAVVRAKDG 180

Query: 181 GGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVE---- 240
            G+Q++LDTAT  RLPLS  ++ L+++ L+I++C S R N+RF+HTIE +  ++ +    
Sbjct: 181 IGIQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYP 240

Query: 241 TIDMSELQNKLTNLEYFPLD 256
           TID+S LQ+KL NLEY+PLD
Sbjct: 241 TIDVSVLQHKLANLEYYPLD 251

[Close]
BLAST of CSPI05G06060 vs. TrEMBL
Match: B9GKR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 106/248 (42.74%), Postives = 149/248 (60.08%), Query Frame = 1 

Query: 3   LDCIQSPFPFD--QVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 62
           +D I S F  D    D+L    S  P          +         +++ K + GRRRKS
Sbjct: 1   MDYISSVFQIDYNSTDDLVQYFSSFPTQQQTTPKDKVPLRPYEDCHDLANKTQHGRRRKS 60

Query: 63  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 122
           P     ++DENPN N  KKKKIIHRD+ERQRRQEM+ LY +LR LLP++YLKGKRS  DH
Sbjct: 61  PIALGSVKDENPNDN--KKKKIIHRDIERQRRQEMANLYGSLRCLLPLKYLKGKRSTSDH 120

Query: 123 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 182
           +H+TV YI+H + KIQ L +K+DELK+ +         + +E L   +RD++ V  R C 
Sbjct: 121 IHQTVYYIKHQEEKIQKLIDKKDELKRYLSTS------SALENLEGCERDTLTVRTR-CV 180

Query: 183 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 242
           GV++ ++TA     PLS ++  LI +   ++SC ST+ N+R LH I +E   D  ++D+S
Sbjct: 181 GVEVDINTALKKGFPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISE-VTDGRSLDIS 238

Query: 243 ELQNKLTN 249
           ELQ KLT+
Sbjct: 241 ELQQKLTS 238

[Close]
BLAST of CSPI05G06060 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24
Identity = 73/203 (35.96%), Postives = 118/203 (58.13%), Query Frame = 1 

Query: 54  KGRRRKSPNTSADIED-------ENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 113
           KG +R+ P +SA            +   +  KKKK++HRD+ERQRRQEM+TL+A LR+ L
Sbjct: 10  KGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

Query: 114 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNI--TTIETL 173
           P++Y+KGKR++ DH++  V +I+  + +I+ L  +RDEL +    G  S      T   +
Sbjct: 70  PLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGKTGSDV 129

Query: 174 NSSKRDSVLVMPRSCG-GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFL 233
             S+  +V+V P   G  V +  +++    LPLS +++ +  + L+++S  +TR NDR +
Sbjct: 130 GKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLM 189

Query: 234 HTIETEAAVDVETIDMSELQNKL 247
           HTI+ E       ID+  LQ KL
Sbjct: 190 HTIQVEVN-SFGCIDLLWLQQKL 211

[Close]
BLAST of CSPI05G06060 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24
Identity = 75/208 (36.06%), Postives = 119/208 (57.21%), Query Frame = 1 

Query: 47  NISEKPKKGRRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLL 106
           N S  PKK R +       D           K+KK++HR++ERQRRQEM+ L+A+LRS L
Sbjct: 2   NPSNNPKKTRHQSHMPQERD--------ETKKEKKLLHRNIERQRRQEMAILFASLRSQL 61

Query: 107 PVEYLKGKRSICDHMHETVKYIQHMQTKIQMLRNKRDELKKNIED-----GEDSGNITTI 166
           P++Y+KGKR++ DH++  V +I+  QT+I+ L  +RDELK+ I D     G  SG+    
Sbjct: 62  PLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGS---- 121

Query: 167 ETLNSSKRDSVLVMPRSC-GGVQILLDTATH--HRLPLSNLIKFLITQNLQIISCHSTRK 226
               SS+ +   VM + C  G ++++ +        PLS +++ L  Q L++IS  + R 
Sbjct: 122 ---GSSRSEPASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARV 181

Query: 227 NDRFLHTIETEAAVDVETIDMSELQNKL 247
           N+R ++TI+ E     +  D++ LQ KL
Sbjct: 182 NERLMYTIQVEVN-SFDCFDLAWLQQKL 193

[Close]
BLAST of CSPI05G06060 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 8.3e-23
Identity = 71/199 (35.68%), Postives = 115/199 (57.79%), Query Frame = 1 

Query: 58  RKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 117
           R++  T+  + +     +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS 
Sbjct: 53  RQNCETTMTLSEIMKGDDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSS 112

Query: 118 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSK-----RDSV 177
            DH+ E V YI+ +Q KI+ +  KRD +K++I      G   +I +L SS        ++
Sbjct: 113 ADHVLEAVNYIKDLQKKIKEVSEKRDRIKRSITHPSSRGEF-SIRSLASSTCSCVGDTNI 172

Query: 178 LVMPRSC-GGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRKNDRFLHTIETEA 237
            V+ R C  G++I++     H   LS++++ L   Q   I+SC STR +  F+HTI +E 
Sbjct: 173 AVVVRPCLIGLEIVVSCCNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEV 232

Query: 238 AVDVETIDMSELQNKLTNL 250
              +E +  SELQ K+  +
Sbjct: 233 EEGIE-VYFSELQEKIIKI 249

[Close]
BLAST of CSPI05G06060 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 71/211 (33.65%), Postives = 121/211 (57.35%), Query Frame = 1 

Query: 56  RRRKSPNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKR 115
           ++R   + +    + N N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKR
Sbjct: 50  KKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKR 109

Query: 116 SICDHMHETVKYIQHMQTKIQMLRNKRDELKK----------NIEDGEDSGNITTIETLN 175
           S  DH+ + V YI+ +Q KI+ L  KR+ +KK           IE+   S + +   TL+
Sbjct: 110 STSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLS 169

Query: 176 SS------KRDSVLVMPRSCGGVQILLDTATHHRLPLSNLIKFLI-TQNLQIISCHSTRK 235
           SS      K  +V+V P   G   I+      ++  LS++++ L   Q   ++SC S R+
Sbjct: 170 SSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARR 229

Query: 236 NDRFLHTIETEAAVDVETIDMSELQNKLTNL 250
             RF+HTI ++   D + I++ EL++K+  +
Sbjct: 230 QQRFMHTIVSQVE-DGKQINILELKDKIMTM 259

[Close]
BLAST of CSPI05G06060 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 63/176 (35.80%), Postives = 107/176 (60.80%), Query Frame = 1 

Query: 80  KKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHMQTKIQMLR 139
           +K++HR+ ERQRRQEM++LYA+LRSLLP+ ++KGKRS  D ++E V YI+++Q KI+ L 
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 140 NKRDE---LKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSC-GGVQILLDTATHHRLP 199
            +RD+   L +    G  +G+      + S K     V+ R C  GV+I+L +      P
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH---VVVRQCLVGVEIMLSSRCCGGQP 121

Query: 200 -LSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMSELQNKLTNLE 251
             S++++ L    L +++  S+  +DR ++TI+ E       ID++EL+ +L  ++
Sbjct: 122 RFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRMK 174

[Close]
BLAST of CSPI05G06060 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 1.1e-138
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06060 vs. NCBI nr
Match: gi|700194987|gb|KGN50164.1| (hypothetical protein Csa_5G157230 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 2.8e-137
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60
           MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120
           PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180
           MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDS NITTIETLNSSKRDSVLVMPRSCG
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240
           GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIE+EAAVDVETIDMS
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQNKLTNLEYFPLD 256
           ELQNKLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]
BLAST of CSPI05G06060 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-70
Identity = 155/261 (59.39%), Postives = 195/261 (74.71%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPI-HLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD  DEL PLPSLS I +  V   P ++ + NN +  +S +PK GRR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSIC 120
            P NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSIC
Sbjct: 61  PPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIC 120

Query: 121 DHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPR- 180
           DHMHETVKYI++MQ+KIQ L +KRDELKK ++    + ++   ETL S+KRD V+V  R 
Sbjct: 121 DHMHETVKYIRYMQSKIQELCDKRDELKK-LQSNNQNPDMVETETLKSTKRDKVVVRARD 180

Query: 181 SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETE---AAVDV 240
             GG+Q++LDTAT HRLPLSN++  L  Q L+I+SC S + NDRFLHTIE++    + + 
Sbjct: 181 GSGGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNS 240

Query: 241 ETIDMSELQNKLTNLEYFPLD 256
             ID+S LQ  LTNLEY PLD
Sbjct: 241 PIIDVSGLQYTLTNLEYCPLD 259

[Close]
BLAST of CSPI05G06060 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 3.9e-67
Identity = 149/261 (57.09%), Postives = 192/261 (73.56%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQVDELFPLPSLSPI-HLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD  DEL PLPSLS I +  V   P ++ + NN +  +S +PK GRR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSIC 120
            P NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI 
Sbjct: 61  PPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIS 120

Query: 121 DHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRS 180
           DHM ETV YIQHMQ +IQ L++KRD+L++     +    I T ETLNSS+RDSV+V  + 
Sbjct: 121 DHMQETVSYIQHMQRRIQQLKDKRDKLRELA--NQTMVIIGTTETLNSSERDSVVVRAKD 180

Query: 181 CGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVE--- 240
             G+Q++LDTAT HRLPLS  ++ L+ + L+I++C S R N+RF+HTIE +  +  +   
Sbjct: 181 GIGIQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCY 240

Query: 241 -TIDMSELQNKLTNLEYFPLD 256
            TID S LQ+KL NLEY+PLD
Sbjct: 241 PTIDASMLQHKLANLEYYPLD 258

[Close]
BLAST of CSPI05G06060 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-66
Identity = 155/263 (58.94%), Postives = 190/263 (72.24%), Query Frame = 1 

Query: 1   MDLDCIQSPFPFDQV-DELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRK 60
           MDL+ ++SPF FD + DEL PLPSLS I        P I   NN N  +S   K  RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSILE-NNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSI 120
               NTS D +DEN N NEHKKKKI+HRDVERQRRQEMS+LY+ LRSLLP+EYLKGKRSI
Sbjct: 61  PVPANTSDDKDDEN-NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSI 120

Query: 121 CDHMHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPR 180
           CDHMHETVKYI++MQ+KIQ L +KRDELKK   + ++ G + T ETL S+KRD V+V  R
Sbjct: 121 CDHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVET-ETLQSTKRDKVVVRAR 180

Query: 181 -SCGGVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVET 240
              GG+Q++LDT T HRL LSN+++ LI Q  +I+SC S + NDRFLHTIE++ AV  +T
Sbjct: 181 DGSGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDT 240

Query: 241 ----IDMSELQNKLTNLEYFPLD 256
               ID+S+LQ  L NLEY PLD
Sbjct: 241 NSPLIDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:
BLAST of CSPI05G06060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH126_ARATH7.8e-2335.96Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH120_ARATH1.0e-2236.06Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BH055_ARATH1.5e-2135.68Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BH125_ARATH4.3e-2133.65Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1[more]
BH036_ARATH5.2e-1935.80Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BLAST of CSPI05G06060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A097IYP0_CUCSA7.8e-139100.00BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1[more]
A0A0A0KMQ4_CUCSA1.9e-13799.22Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1[more]
A0A0A0KKN9_CUCSA1.0e-6658.94Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1[more]
A0A097IYN6_CUCSA1.8e-5551.92BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1[more]
B9GKR8_POPTR4.9e-4042.74Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1[more]
BLAST of CSPI05G06060 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25410.14.4e-2435.96 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51790.15.7e-2436.06 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G12540.18.3e-2335.68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G62975.12.4e-2233.65 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.12.9e-2035.80 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CSPI05G06060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|821595271|ref|NP_001295841.1|1.1e-138100.00transcription factor bHLH118-like [Cucumis sativus][more]
gi|700194987|gb|KGN50164.1|2.8e-13799.22hypothetical protein Csa_5G157230 [Cucumis sativus][more]
gi|659073658|ref|XP_008437182.1|1.7e-7059.39PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo][more]
gi|659073660|ref|XP_008437183.1|3.9e-6757.09PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo][more]
gi|449459720|ref|XP_004147594.1|1.5e-6658.94PREDICTED: transcription factor bHLH36-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G06060.1CSPI05G06060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 83..150
score: 3.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 83..132
score: 4.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 85..137
score: 4.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 79..131
score: 12
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 77..149
score: 2.09
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 40..248
score: 3.4
NoneNo IPR availableunknownCoilCoilcoord: 128..155
scor
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 40..248
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G06060MELO3C034003.2Melon (DHL92) v3.6.1cpimedB338
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB258
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB295
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB416
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB606
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB836
CSPI05G06060Cucurbita moschata (Rifu)cmocpiB837
CSPI05G06060Cucumber (Chinese Long) v2cpicuB222
CSPI05G06060Cucumber (Chinese Long) v2cpicuB225
CSPI05G06060Cucumber (Chinese Long) v2cpicuB226
CSPI05G06060Cucumber (Chinese Long) v2cpicuB240
CSPI05G06060Melon (DHL92) v3.5.1cpimeB348
CSPI05G06060Melon (DHL92) v3.5.1cpimeB398
CSPI05G06060Melon (DHL92) v3.5.1cpimeB401
CSPI05G06060Melon (DHL92) v3.5.1cpimeB403
CSPI05G06060Watermelon (Charleston Gray)cpiwcgB368
CSPI05G06060Watermelon (Charleston Gray)cpiwcgB379
CSPI05G06060Watermelon (Charleston Gray)cpiwcgB414
CSPI05G06060Watermelon (97103) v1cpiwmB416
CSPI05G06060Watermelon (97103) v1cpiwmB412
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB040
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB176
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB625
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB738
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB874
CSPI05G06060Cucurbita pepo (Zucchini)cpecpiB875
CSPI05G06060Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G06060Bottle gourd (USVL1VR-Ls)cpilsiB379
CSPI05G06060Bottle gourd (USVL1VR-Ls)cpilsiB390
CSPI05G06060Bottle gourd (USVL1VR-Ls)cpilsiB383
CSPI05G06060Melon (DHL92) v3.6.1cpimedB396
CSPI05G06060Melon (DHL92) v3.6.1cpimedB398
CSPI05G06060Melon (DHL92) v3.6.1cpimedB399
CSPI05G06060Cucumber (Gy14) v2cgybcpiB127
CSPI05G06060Cucumber (Gy14) v2cgybcpiB130
CSPI05G06060Cucumber (Gy14) v2cgybcpiB131
CSPI05G06060Cucumber (Gy14) v2cgybcpiB226
CSPI05G06060Silver-seed gourdcarcpiB0526
CSPI05G06060Silver-seed gourdcarcpiB0652
CSPI05G06060Silver-seed gourdcarcpiB0902
CSPI05G06060Silver-seed gourdcarcpiB0961
CSPI05G06060Silver-seed gourdcarcpiB0977
CSPI05G06060Cucumber (Chinese Long) v3cpicucB269
CSPI05G06060Cucumber (Chinese Long) v3cpicucB262
CSPI05G06060Cucumber (Chinese Long) v3cpicucB268
CSPI05G06060Cucumber (Chinese Long) v3cpicucB285
CSPI05G06060Watermelon (97103) v2cpiwmbB349
CSPI05G06060Watermelon (97103) v2cpiwmbB372
CSPI05G06060Watermelon (97103) v2cpiwmbB401
CSPI05G06060Watermelon (97103) v2cpiwmbB404
CSPI05G06060Watermelon (97103) v2cpiwmbB409
CSPI05G06060Wax gourdcpiwgoB440
CSPI05G06060Wax gourdcpiwgoB487
CSPI05G06060Wild cucumber (PI 183967)cpicpiB111
CSPI05G06060Wild cucumber (PI 183967)cpicpiB115
CSPI05G06060Wild cucumber (PI 183967)cpicpiB116
CSPI05G06060Cucumber (Gy14) v1cgycpiB386
CSPI05G06060Cucumber (Gy14) v1cgycpiB389
CSPI05G06060Cucumber (Gy14) v1cgycpiB457
CSPI05G06060Cucumber (Gy14) v1cgycpiB487
CSPI05G06060Cucumber (Gy14) v1cgycpiB539
CSPI05G06060Cucurbita maxima (Rimu)cmacpiB303
CSPI05G06060Cucurbita maxima (Rimu)cmacpiB614
CSPI05G06060Cucurbita maxima (Rimu)cmacpiB853
CSPI05G06060Cucurbita maxima (Rimu)cmacpiB854