CSPI05G03890 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G03890
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Lipase/lipooxygenase, PLAT/LH2 family protein
Location	Chr5 : 3912909 .. 3914320 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTCCTAAACACAGAGTGGCTAACCACCTTCTCCGGCCAATCGGAGCAGTATATAAACCAATCATCGCCATCTCCTTATGCCCTAATTAAATCTCTATACAGCTATCGGAAAAAGTAAGAAAAATGGCGTCTCCTTCCCTCTGTTTCTCCATTATCTTCATCGCTCTCTTTTTCTCTTCAATGGCTGTTAACTCTTCCGTAAGTTTCTTCTCTTTTAACATATTTCTTCGTTTTTGCTTCTCATCCTCATTTGGATCTATCACTGAAGCTGCGTATTATATTCATTCACTCTGATCTAATTTGCGTTTCTGTTTTTAGTAATCGAGTTATGGCAACATTATAGACTGATCTAATTTGATTGTAGAAATGTAGTTTAGAAAATTATCTGATTTCTTTTGTTGGTGATTTTGTTTTGATTGTATTCAATTGAATGATTGATTGATTCATATTTCAGATCGATTTAGAGTTATGAGTGGCTAATTATTTGGAGAAATCTTGTTTGGAAATTGCAAGATAATGCTCCGTTTAACTAGTTGAATAATGAACTAAGTGAATGATTCACTTTTCAGATTGATTATGTGTTGCGAGAGGGCAATTGTTTTGAGAAATGTGCTTAGAAAATGGAAACTCATGCTCCGATTTCTACGTTGATGATACACGATAAAGAACTGAACGAATGATACAATGCAAGTTCATTTTAAATAGTCTAAATCGCCGTAATTTCTGAACGGATTGTGTTCCATGAAAAGTAATGAAAGTGTCTTTCCGGCGTATGCAGGAGAAATGCGTATACACATTGTACGTGAAGACAGGTTCAATTCTAAAGGGCGGAACGGACTCGAAAATCAGCGTGACACTCGGTGATTCAAGGGGCCAATCGGTGGAGATTTCGGATCTAGAATCGTGGGGACTGATGAAACAAGGACACGACTATTTCGAACGGGACAACATCGACATATTCAGCGGACGGGGCGTGTGCTTGGAATCGCCGGTGTGCCGACTGAACCTGACCTCCGACGGATCGGGGTCCCACCACGGGTGGTTCTGCGACTATGTGGAGGTTACGTCGGCGGGGCCGCACAGAGCATGCTCACAGACGGCGTTTTACGTGGATCAGTGGCTGGCGACCGACGCGCCACCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGTTGAGTGGGCATGCAGCGTCGAGGCATATGCATAGCGGAAAGCTGATGGTTTCCAGTTCCAAAAAATCTGTTGCATCGGAGTGAAGTTGATCGGAAAGGCGGGTGATTTTTCTTTTTTTTTTTGGCAGTGGCGCAACGTGCGGAGTTTTGGGAGCATTTTGCTGCTTTATTATTAATCAAATAAGGGACATTTTCTTACGTCATTATATATATTGAATTTGGATGATAG

mRNA sequence

ATGGCGTCTCCTTCCCTCTGTTTCTCCATTATCTTCATCGCTCTCTTTTTCTCTTCAATGGCTGTTAACTCTTCCGAGAAATGCGTATACACATTGTACGTGAAGACAGGTTCAATTCTAAAGGGCGGAACGGACTCGAAAATCAGCGTGACACTCGGTGATTCAAGGGGCCAATCGGTGGAGATTTCGGATCTAGAATCGTGGGGACTGATGAAACAAGGACACGACTATTTCGAACGGGACAACATCGACATATTCAGCGGACGGGGCGTGTGCTTGGAATCGCCGGTGTGCCGACTGAACCTGACCTCCGACGGATCGGGGTCCCACCACGGGTGGTTCTGCGACTATGTGGAGGTTACGTCGGCGGGGCCGCACAGAGCATGCTCACAGACGGCGTTTTACGTGGATCAGTGGCTGGCGACCGACGCGCCACCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGTTGAGTGGGCATGCAGCGTCGAGGCATATGCATAGCGGAAAGCTGATGGTTTCCAGTTCCAAAAAATCTGTTGCATCGGAGTGA

Coding sequence (CDS)

ATGGCGTCTCCTTCCCTCTGTTTCTCCATTATCTTCATCGCTCTCTTTTTCTCTTCAATGGCTGTTAACTCTTCCGAGAAATGCGTATACACATTGTACGTGAAGACAGGTTCAATTCTAAAGGGCGGAACGGACTCGAAAATCAGCGTGACACTCGGTGATTCAAGGGGCCAATCGGTGGAGATTTCGGATCTAGAATCGTGGGGACTGATGAAACAAGGACACGACTATTTCGAACGGGACAACATCGACATATTCAGCGGACGGGGCGTGTGCTTGGAATCGCCGGTGTGCCGACTGAACCTGACCTCCGACGGATCGGGGTCCCACCACGGGTGGTTCTGCGACTATGTGGAGGTTACGTCGGCGGGGCCGCACAGAGCATGCTCACAGACGGCGTTTTACGTGGATCAGTGGCTGGCGACCGACGCGCCACCGTTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGTTGAGTGGGCATGCAGCGTCGAGGCATATGCATAGCGGAAAGCTGATGGTTTCCAGTTCCAAAAAATCTGTTGCATCGGAGTGA

Homology

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BLAST of CSPI05G03890 vs. Swiss-Prot
Match: LOXH1_MOUSE (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 35/124 (28.23%), Postives = 59/124 (47.58%), Query Frame = 1


Query: 19   SMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEIS-DLESWGLMKQGHDY 78
            +M VN  +K +Y + V TG ++ GGTDS I +TL    G + E+  D +     ++ +D 
Sbjct: 1544 AMVVNIGKKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDT 1603

Query: 79   FERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAGPHRACSQTAFYVD 138
            F  + +DI         +P  ++ +  DG GS   WF + + + +         T FY  
Sbjct: 1604 FIMEILDI---------APFTKMRIRIDGMGSRPEWFLERILLKNM---NTGDLTMFYYG 1655

Query: 139  QWLA 142
             WL+
Sbjct: 1664 DWLS 1655

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BLAST of CSPI05G03890 vs. TrEMBL
Match: A0A0A0KNI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141160 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 6.6e-103
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 1


Query: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60
           MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120
           EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSK 180
           TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGH ASRHMHSGKLMVSSSK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

Query: 181 KSVASE 187
           KSVASE
Sbjct: 181 KSVASE 186

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BLAST of CSPI05G03890 vs. TrEMBL
Match: A0A061G0C9_THECC (Lipase/lipooxygenase OS=Theobroma cacao GN=TCM_014894 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.8e-61
Identity = 117/174 (67.24%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 9   SIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISDLESW 68
           S+I + L  S  A +SS  CVYTLYVKTGS++K GTDSKISVTLGDS G+SV +SDL+SW
Sbjct: 7   SLILLVLLLSMAAGDSSNDCVYTLYVKTGSVIKAGTDSKISVTLGDSLGRSVRVSDLKSW 66

Query: 69  GLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAGPHRA 128
           GLM   HDY+ER N+DIFSGRG C+ S +CRLNLTSDGSGSHHGW+CDYVEVTS GPH+A
Sbjct: 67  GLMTPSHDYYERGNLDIFSGRGRCIGSSICRLNLTSDGSGSHHGWYCDYVEVTSTGPHKA 126

Query: 129 CSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKKS 183
           CSQT FYVDQWLA DAPPFQLT ILDGC   +    A R + +G L+V + ++S
Sbjct: 127 CSQTVFYVDQWLAGDAPPFQLTAILDGCS--MRDGPAKRGI-NGPLVVGNPQRS 177

[Close]

BLAST of CSPI05G03890 vs. TrEMBL
Match: B9H066_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10630g PE=4 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 4.1e-60
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 1


Query: 5   SLCFSIIFIALFFSSMA---VNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVE 64
           +LC SIIFIALFFS+ A         C+Y LYVKTGSI+K GTDSKIS+TLGD++G+SV 
Sbjct: 4   TLCLSIIFIALFFSADANGFYGGGGDCIYALYVKTGSIMKAGTDSKISLTLGDAQGRSVW 63

Query: 65  ISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVT 124
           + DL+SWGLM+  HDY+ER N+DIFSGRG C+ +P+CRLNLTSDG GSHHGW+CDYVEVT
Sbjct: 64  VPDLQSWGLMEPKHDYYERANLDIFSGRGPCISAPICRLNLTSDGQGSHHGWYCDYVEVT 123

Query: 125 SAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKK 184
           S GPH+ CSQT FYVDQWLA D PPF+LT +LDGC     G  A +   +GK  V + + 
Sbjct: 124 STGPHKECSQTIFYVDQWLAADVPPFKLTALLDGC---RIGDDALKKGKNGKFAVENVRG 183

Query: 185 SVAS 186
           S  S
Sbjct: 184 SAFS 184

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BLAST of CSPI05G03890 vs. TrEMBL
Match: F6HMP7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01680 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-57
Identity = 109/182 (59.89%), Postives = 136/182 (74.73%), Query Frame = 1


Query: 3   SPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEI 62
           S  LC  I+ I L +SS   ++S+ CVY LYVKTGS+ K GTDS IS+TL D  G+SV +
Sbjct: 7   SGQLCLFILVIVLSYSSPGNSNSDNCVYALYVKTGSVPKAGTDSNISITLSDPGGKSVRV 66

Query: 63  SDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTS 122
           SDLESWGLM   H+Y+ER N+D+FSGRG C+ +P+CRLNLTSDGSG HHGW+CDYVEVT+
Sbjct: 67  SDLESWGLMGSNHNYYERGNMDVFSGRGPCIGAPICRLNLTSDGSGEHHGWYCDYVEVTA 126

Query: 123 AGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKKS 182
            GPHR C QT FYVDQWLA+DAPP+QLT ++DGC   L   AA     SG+L++ +S  S
Sbjct: 127 TGPHRPCGQTIFYVDQWLASDAPPYQLTAVVDGCR--LENIAAK----SGRLVLRNSLGS 182

Query: 183 VA 185
            +
Sbjct: 187 AS 182

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BLAST of CSPI05G03890 vs. TrEMBL
Match: B9R9V6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500900 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-56
Identity = 100/155 (64.52%), Postives = 125/155 (80.65%), Query Frame = 1


Query: 5   SLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISD 64
           SL  +++ +   FS+   +  ++CVYTLYVKTGSI+K GTDSKIS+TLGDS+G+SV ++D
Sbjct: 3   SLPIAVLLLLALFSAAREDHDDECVYTLYVKTGSIIKAGTDSKISLTLGDSQGRSVWVTD 62

Query: 65  LESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAG 124
           LESWGLM   HDY+ER N+DIFSGRG C+ +P+CRLNLTSDGSG HHGW+CDY+EVTS G
Sbjct: 63  LESWGLMGPKHDYYERGNLDIFSGRGRCIGTPICRLNLTSDGSGPHHGWYCDYIEVTSTG 122

Query: 125 PHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDW 160
            H+ CSQT FYVDQWLATD  P++LT  +DGC  W
Sbjct: 123 LHKECSQTIFYVDQWLATDVAPYKLTAEIDGCGLW 157

[Close]

BLAST of CSPI05G03890 vs. TAIR10
Match: AT4G39730.1 (AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 164.5 bits (415), Expect = 6.4e-41
Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1


Query: 12  FIALFFSSMAVNSSEK---CVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISDLESW 71
           F+ L  +  AV  +E    CVYT Y++TGSI K GTDS IS  + D  G  + I +L++W
Sbjct: 10  FLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDYIGIKNLQAW 69

Query: 72  -GLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAGPHR 131
            GLM   ++YFER N+DIFSGR  CL SP+C LNLTSDGSG HHGW+ +YVE+T+AG H 
Sbjct: 70  AGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYVEITTAGVHA 129

Query: 132 ACSQTAFYVDQWLATDAPPFQLTTILDGC 157
            CS   F ++QWLATD  P++LT + + C
Sbjct: 130 QCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of CSPI05G03890 vs. TAIR10
Match: AT2G22170.1 (AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 77/153 (50.33%), Postives = 106/153 (69.28%), Query Frame = 1


Query: 6   LCFSIIFIALFFSSMAVNSSEK-CVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISD 65
           L  S++ +    S++A+   E  CVYT +++TGS  K GTDS IS  + D  G  + I +
Sbjct: 8   LFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRN 67

Query: 66  LESWG-LMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSA 125
           LE+WG LM  G++Y+ER N+DIFSG+  CL SPVC LNLTSDGSG HHGW+ +YVEVT+A
Sbjct: 68  LEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNYVEVTTA 127

Query: 126 GPHRACSQTAFYVDQWLATDAPPFQLTTILDGC 157
           G H  CS  +F V+QWLA+D  P++L+ + + C
Sbjct: 128 GVHAKCSYQSFDVEQWLASDTSPYELSAVRNNC 160

[Close]

BLAST of CSPI05G03890 vs. TAIR10
Match: AT5G65158.1 (AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 137.5 bits (345), Expect = 8.4e-33
Identity = 66/104 (63.46%), Postives = 76/104 (73.08%), Query Frame = 1


Query: 48  ISVTLGDSRGQSVEISDLESWG-LMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDG 107
           +S+ L DS GQ   ISDL SWG LM   HDYFER N+DIFSG G CL  PVC +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGSHHGWFCDYVEVT-SAGPHRACSQTAFYVDQWLATDAPPFQL 150
           SG HHGW+C+YVEVT S    R+CSQ  F V+QWLA DA P++L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of CSPI05G03890 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 39/130 (30.00%), Postives = 58/130 (44.62%), Query Frame = 1


Query: 1   MASPSLCFSIIFIALFFSSMAVNSS------EKCVYTLYVKTGSILKGGTDSKISVTLGD 60
           M  PSL  S +F A  F + A + S        C YT+ V T  +    T  +IS+  GD
Sbjct: 1   MTFPSLSVSFLFFAFIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGD 60

Query: 61  SRGQSVEISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWF 120
           + G  V    L   G + +G     + + + F  RG CL  P+C L +  +G     GW 
Sbjct: 61  ADGNKVYAPKL---GGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGP---DGWV 120

Query: 121 CDYVEVTSAG 125
            + +E+ S G
Sbjct: 121 PESIEIYSEG 124

[Close]

BLAST of CSPI05G03890 vs. NCBI nr
Match: gi|778699086|ref|XP_004145970.2| (PREDICTED: uncharacterized protein LOC101212967 [Cucumis sativus])

HSP 1 Score: 381.3 bits (978), Expect = 9.5e-103
Identity = 185/186 (99.46%), Postives = 185/186 (99.46%), Query Frame = 1


Query: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60
           MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120
           EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSK 180
           TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGH ASRHMHSGKLMVSSSK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

Query: 181 KSVASE 187
           KSVASE
Sbjct: 181 KSVASE 186

[Close]

BLAST of CSPI05G03890 vs. NCBI nr
Match: gi|659074257|ref|XP_008437507.1| (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 354.8 bits (909), Expect = 9.5e-95
Identity = 171/186 (91.94%), Postives = 177/186 (95.16%), Query Frame = 1


Query: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60
           MAS SLCFSIIFIALFFS+MA  SSEKCVYTLYVKTGSILKGGTDSKISV LGDSRGQSV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120
           EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGW+CDYVEV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSK 180
           TSAGPHRACSQTAFYVDQWLATDAPPFQLTT LDGCDDWLSGH  SRHM+ G+L+VS S+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGRLVVSGSR 180

Query: 181 KSVASE 187
           KSVASE
Sbjct: 181 KSVASE 186

[Close]

BLAST of CSPI05G03890 vs. NCBI nr
Match: gi|590671459|ref|XP_007038337.1| (Lipase/lipooxygenase [Theobroma cacao])

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-61
Identity = 117/174 (67.24%), Postives = 138/174 (79.31%), Query Frame = 1


Query: 9   SIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVEISDLESW 68
           S+I + L  S  A +SS  CVYTLYVKTGS++K GTDSKISVTLGDS G+SV +SDL+SW
Sbjct: 7   SLILLVLLLSMAAGDSSNDCVYTLYVKTGSVIKAGTDSKISVTLGDSLGRSVRVSDLKSW 66

Query: 69  GLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVTSAGPHRA 128
           GLM   HDY+ER N+DIFSGRG C+ S +CRLNLTSDGSGSHHGW+CDYVEVTS GPH+A
Sbjct: 67  GLMTPSHDYYERGNLDIFSGRGRCIGSSICRLNLTSDGSGSHHGWYCDYVEVTSTGPHKA 126

Query: 129 CSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKKS 183
           CSQT FYVDQWLA DAPPFQLT ILDGC   +    A R + +G L+V + ++S
Sbjct: 127 CSQTVFYVDQWLAGDAPPFQLTAILDGCS--MRDGPAKRGI-NGPLVVGNPQRS 177

[Close]

BLAST of CSPI05G03890 vs. NCBI nr
Match: gi|743847386|ref|XP_011027964.1| (PREDICTED: uncharacterized protein LOC105128136 [Populus euphratica])

HSP 1 Score: 240.4 bits (612), Expect = 2.6e-60
Identity = 117/184 (63.59%), Postives = 139/184 (75.54%), Query Frame = 1


Query: 5   SLCFSIIFIALFFSSMA---VNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVE 64
           +LC SIIFIALFFS+ A         CVY LYVKTGSI+K GTDSKIS+TLGD++G+SV 
Sbjct: 4   TLCLSIIFIALFFSADANGFYGGGGDCVYALYVKTGSIMKAGTDSKISLTLGDAQGRSVW 63

Query: 65  ISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVT 124
           + DL+SWGLMK  HDY+ER N+DIFSGRG C+ +P+CRLNLTSDG GSHHGW+CDYVEVT
Sbjct: 64  VPDLQSWGLMKPKHDYYERANLDIFSGRGQCIGAPICRLNLTSDGQGSHHGWYCDYVEVT 123

Query: 125 SAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKK 184
           S GPH+ CSQT FYVDQWLA D PPF+LT +LDGC     G  A +   +GK  V + + 
Sbjct: 124 STGPHKECSQTIFYVDQWLAADVPPFKLTALLDGC---RIGDDALKKGKNGKFAVENVRG 183

Query: 185 SVAS 186
           S  S
Sbjct: 184 SAFS 184

[Close]

BLAST of CSPI05G03890 vs. NCBI nr
Match: gi|566162014|ref|XP_002303488.2| (hypothetical protein POPTR_0003s10630g [Populus trichocarpa])

HSP 1 Score: 239.2 bits (609), Expect = 5.8e-60
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 1


Query: 5   SLCFSIIFIALFFSSMA---VNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSVE 64
           +LC SIIFIALFFS+ A         C+Y LYVKTGSI+K GTDSKIS+TLGD++G+SV 
Sbjct: 4   TLCLSIIFIALFFSADANGFYGGGGDCIYALYVKTGSIMKAGTDSKISLTLGDAQGRSVW 63

Query: 65  ISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEVT 124
           + DL+SWGLM+  HDY+ER N+DIFSGRG C+ +P+CRLNLTSDG GSHHGW+CDYVEVT
Sbjct: 64  VPDLQSWGLMEPKHDYYERANLDIFSGRGPCISAPICRLNLTSDGQGSHHGWYCDYVEVT 123

Query: 125 SAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHAASRHMHSGKLMVSSSKK 184
           S GPH+ CSQT FYVDQWLA D PPF+LT +LDGC     G  A +   +GK  V + + 
Sbjct: 124 STGPHKECSQTIFYVDQWLAADVPPFKLTALLDGC---RIGDDALKKGKNGKFAVENVRG 183

Query: 185 SVAS 186
           S  S
Sbjct: 184 SAFS 184

The following BLAST results are available for this feature:

BLAST of CSPI05G03890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LOXH1_MOUSE	2.2e-06	28.23	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus GN=Loxhd1 PE=2...	[more]

BLAST of CSPI05G03890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNI5_CUCSA	6.6e-103	99.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G141160 PE=4 SV=1	[more]
A0A061G0C9_THECC	2.8e-61	67.24	Lipase/lipooxygenase OS=Theobroma cacao GN=TCM_014894 PE=4 SV=1	[more]
B9H066_POPTR	4.1e-60	62.50	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s10630g PE=4 SV=2	[more]
F6HMP7_VITVI	1.9e-57	59.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g01680 PE=4 SV=...	[more]
B9R9V6_RICCO	3.6e-56	64.52	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1500900 PE=4 SV=1	[more]

BLAST of CSPI05G03890 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39730.1	6.4e-41	52.35	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	1.9e-40	50.33	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	8.4e-33	63.46	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G07190.1	1.2e-07	30.00	seed gene 3	[more]

BLAST of CSPI05G03890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699086\|ref\|XP_004145970.2\|	9.5e-103	99.46	PREDICTED: uncharacterized protein LOC101212967 [Cucumis sativus]	[more]
gi\|659074257\|ref\|XP_008437507.1\|	9.5e-95	91.94	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis melo]	[more]
gi\|590671459\|ref\|XP_007038337.1\|	4.0e-61	67.24	Lipase/lipooxygenase [Theobroma cacao]	[more]
gi\|743847386\|ref\|XP_011027964.1\|	2.6e-60	63.59	PREDICTED: uncharacterized protein LOC105128136 [Populus euphratica]	[more]
gi\|566162014\|ref\|XP_002303488.2\|	5.8e-60	62.50	hypothetical protein POPTR_0003s10630g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015947	methane metabolic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004096	catalase activity
molecular_function	GO:0020037	heme binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G03890.1	CSPI05G03890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	GENE3D	G3DSA:2.60.60.20		coord: 30..144 score: 5.8
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..144 score: 1.7
IPR001024	PLAT/LH2 domain	PROFILE	PS50095	PLAT	coord: 28..154 score: 21
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 24..144 score: 1.38
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 5..184 score: 9.5
None	No IPR available	PANTHER	PTHR31718:SF9	SUBFAMILY NOT NAMED	coord: 5..184 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G03890	Cla004959	Watermelon (97103) v1	cpiwmB416
CSPI05G03890	Csa5G141160	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G03890	MELO3C005822	Melon (DHL92) v3.5.1	cpimeB348
CSPI05G03890	ClCG01G001120	Watermelon (Charleston Gray)	cpiwcgB379
CSPI05G03890	Lsi09G000980	Bottle gourd (USVL1VR-Ls)	cpilsiB322
CSPI05G03890	MELO3C005822.2	Melon (DHL92) v3.6.1	cpimedB338
CSPI05G03890	CsaV3_5G001250	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G03890	Cla97C01G001160	Watermelon (97103) v2	cpiwmbB349
CSPI05G03890	Bhi12G000023	Wax gourd	cpiwgoB439
CSPI05G03890	Cucsa.193140	Cucumber (Gy14) v1	cgycpiB304
CSPI05G03890	CmaCh02G009730	Cucurbita maxima (Rimu)	cmacpiB617
CSPI05G03890	CmoCh02G009810	Cucurbita moschata (Rifu)	cmocpiB610
CSPI05G03890	Cp4.1LG05g07380	Cucurbita pepo (Zucchini)	cpecpiB732
CSPI05G03890	CsGy5G001120	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G03890	Carg08504	Silver-seed gourd	carcpiB0747

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G03890	Cucumber (Chinese Long) v3	cpicucB282
CSPI05G03890	Watermelon (97103) v2	cpiwmbB415
CSPI05G03890	Wax gourd	cpiwgoB483
CSPI05G03890	Wild cucumber (PI 183967)	cpicpiB158
CSPI05G03890	Cucumber (Gy14) v1	cgycpiB132
CSPI05G03890	Cucurbita maxima (Rimu)	cmacpiB303
CSPI05G03890	Cucurbita moschata (Rifu)	cmocpiB295
CSPI05G03890	Cucumber (Chinese Long) v2	cpicuB238
CSPI05G03890	Watermelon (Charleston Gray)	cpiwcgB423
CSPI05G03890	Cucurbita pepo (Zucchini)	cpecpiB014
CSPI05G03890	Melon (DHL92) v3.6.1	cpimedB403
CSPI05G03890	Cucumber (Gy14) v2	cgybcpiB186
CSPI05G03890	Silver-seed gourd	carcpiB1072