CSPI05G03540 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA ATGGCTCAACTTGGAGATTTGAGGAAGAATTTTGTGTTACTGAAACATATTAATGACAACCAAGAAACAAGCCTTCGTTACTGTGAAACCAAACTTCAAAACATTGTTCTTGGTTACCTTTCTTGGGGACGCCTCTTCTTCTTTGGCTTTTCTTTCTCCTTCAAGTGTAAGGATTGGTGGGTCGTTTTGTCTTTAACTCTGCTCTCTACCTTCCTCTACCTTTTGCTTTTCATGGATGCTGTCGTTATGTTATCTCGAACACACGATCAACTCGGCATAATTCGGAAGGAACTTACTGAAATTTGCCAACAAATTTTGGTAGCTCAAAACCAGGACACTGTGGATCTATCTATGGAGGGTGGAGAATGTTGTGATGGATTTGAATTGAGTTTCCACGAGAGGATGTTTATGCTCGATGAGTTTAGCGTTGTTGAGAATGGGAGGAAAGGGTATATTTATTTCATTGTCTGTGCCTTGCTTGTGATTACTGCTATTGAGTTATATGCTTGCAAGCGGTTATTGTGCAACTAA
BLAST of CSPI05G03540 vs. TrEMBL
Match: A0A0A0KJZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139810 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.1e-94 Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of CSPI05G03540 vs. TrEMBL
Match: A0A0A0KND2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139800 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 6.2e-34 Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = 1
BLAST of CSPI05G03540 vs. TrEMBL
Match: E5GBE1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.6e-20 Identity = 70/181 (38.67%), Postives = 98/181 (54.14%), Query Frame = 1
BLAST of CSPI05G03540 vs. TrEMBL
Match: A0A0A0KM15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18 Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = 1
BLAST of CSPI05G03540 vs. TrEMBL
Match: A0A0A0KUT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G562290 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15 Identity = 64/183 (34.97%), Postives = 92/183 (50.27%), Query Frame = 1
BLAST of CSPI05G03540 vs. NCBI nr
Match: gi|700194726|gb|KGN49903.1| (hypothetical protein Csa_5G139810 [Cucumis sativus]) HSP 1 Score: 354.0 bits (907), Expect = 1.5e-94 Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of CSPI05G03540 vs. NCBI nr
Match: gi|700194725|gb|KGN49902.1| (hypothetical protein Csa_5G139800 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 8.9e-34 Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = 1
BLAST of CSPI05G03540 vs. NCBI nr
Match: gi|307135919|gb|ADN33782.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 105.5 bits (262), Expect = 9.5e-20 Identity = 70/181 (38.67%), Postives = 98/181 (54.14%), Query Frame = 1
BLAST of CSPI05G03540 vs. NCBI nr
Match: gi|778698988|ref|XP_011654634.1| (PREDICTED: uncharacterized protein LOC105435426 isoform X1 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 4.7e-19 Identity = 73/177 (41.24%), Postives = 93/177 (52.54%), Query Frame = 1
BLAST of CSPI05G03540 vs. NCBI nr
Match: gi|700194727|gb|KGN49904.1| (hypothetical protein Csa_5G139820 [Cucumis sativus]) HSP 1 Score: 100.5 bits (249), Expect = 3.1e-18 Identity = 71/183 (38.80%), Postives = 96/183 (52.46%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |