CSPI05G03300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G03300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 3592202 .. 3592408 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAAGCTGACATTATGAAGATAGCGACATTGGCAGATAAATGGGCAATAAGAAGAGACAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGATGAAGACGGCAGAGAAACCTCTAACACAACGCCACCAAGAAATAGCATTACATTTTACCCAAGTAATGATAGCATCTTATCAGACATTGAG

mRNA sequence

ATGCAACAAGCTGACATTATGAAGATAGCGACATTGGCAGATAAATGGGCAATAAGAAGAGACAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGATGAAGACGGCAGAGAAACCTCTAACACAACGCCACCAAGAAATAGCATTACATTTTACCCAAGTAATGATAGCATCTTATCAGACATTGAG

Coding sequence (CDS)

ATGCAACAAGCTGACATTATGAAGATAGCGACATTGGCAGATAAATGGGCAATAAGAAGAGACAGTAATGCATGTATGTCAGCTCAGATGGAGCTTTTTGATGTCAAACAATCAGATGAAGACGGCAGAGAAACCTCTAACACAACGCCACCAAGAAATAGCATTACATTTTACCCAAGTAATGATAGCATCTTATCAGACATTGAG
Homology
[Close]
BLAST of CSPI05G03300 vs. TrEMBL
Match: A0A0A0KN96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139550 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.6e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS 60
          MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS
Sbjct: 1  MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS 60

Query: 61 NDSILSDIE 70
          NDSILSDIE
Sbjct: 61 NDSILSDIE 69

[Close]
BLAST of CSPI05G03300 vs. NCBI nr
Match: gi|700194700|gb|KGN49877.1| (hypothetical protein Csa_5G139550 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 5.2e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 1  MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS 60
          MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS
Sbjct: 1  MQQADIMKIATLADKWAIRRDSNACMSAQMELFDVKQSDEDGRETSNTTPPRNSITFYPS 60

Query: 61 NDSILSDIE 70
          NDSILSDIE
Sbjct: 61 NDSILSDIE 69

The following BLAST results are available for this feature:
BLAST of CSPI05G03300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G03300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN96_CUCSA3.6e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139550 PE=4 SV=1[more]
BLAST of CSPI05G03300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G03300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194700|gb|KGN49877.1|5.2e-30100.00hypothetical protein Csa_5G139550 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G03300.1CSPI05G03300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G03300Csa5G139550Cucumber (Chinese Long) v2cpicuB240
CSPI05G03300MELO3C034016.2Melon (DHL92) v3.6.1cpimedB338
CSPI05G03300CsaV3_5G000630Cucumber (Chinese Long) v3cpicucB285
CSPI05G03300Bhi12G000547Wax gourdcpiwgoB456
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G03300Silver-seed gourdcarcpiB0333
CSPI05G03300Silver-seed gourdcarcpiB0543
CSPI05G03300Silver-seed gourdcarcpiB0576
CSPI05G03300Silver-seed gourdcarcpiB1029
CSPI05G03300Cucumber (Chinese Long) v3cpicucB263
CSPI05G03300Watermelon (97103) v2cpiwmbB349
CSPI05G03300Watermelon (97103) v2cpiwmbB399
CSPI05G03300Watermelon (97103) v2cpiwmbB403
CSPI05G03300Wax gourdcpiwgoB484
CSPI05G03300Wild cucumber (PI 183967)cpicpiB110
CSPI05G03300Cucumber (Gy14) v1cgycpiB322
CSPI05G03300Cucumber (Gy14) v1cgycpiB387
CSPI05G03300Cucurbita maxima (Rimu)cmacpiB298
CSPI05G03300Cucurbita maxima (Rimu)cmacpiB346
CSPI05G03300Cucurbita maxima (Rimu)cmacpiB425
CSPI05G03300Cucurbita maxima (Rimu)cmacpiB618
CSPI05G03300Cucurbita moschata (Rifu)cmocpiB257
CSPI05G03300Cucurbita moschata (Rifu)cmocpiB288
CSPI05G03300Cucurbita moschata (Rifu)cmocpiB337
CSPI05G03300Cucurbita moschata (Rifu)cmocpiB414
CSPI05G03300Cucurbita moschata (Rifu)cmocpiB611
CSPI05G03300Cucumber (Chinese Long) v2cpicuB221
CSPI05G03300Melon (DHL92) v3.5.1cpimeB348
CSPI05G03300Melon (DHL92) v3.5.1cpimeB399
CSPI05G03300Melon (DHL92) v3.5.1cpimeB404
CSPI05G03300Watermelon (Charleston Gray)cpiwcgB379
CSPI05G03300Watermelon (Charleston Gray)cpiwcgB410
CSPI05G03300Watermelon (Charleston Gray)cpiwcgB413
CSPI05G03300Watermelon (97103) v1cpiwmB406
CSPI05G03300Watermelon (97103) v1cpiwmB416
CSPI05G03300Watermelon (97103) v1cpiwmB411
CSPI05G03300Cucurbita pepo (Zucchini)cpecpiB038
CSPI05G03300Cucurbita pepo (Zucchini)cpecpiB189
CSPI05G03300Cucurbita pepo (Zucchini)cpecpiB227
CSPI05G03300Cucurbita pepo (Zucchini)cpecpiB624
CSPI05G03300Cucurbita pepo (Zucchini)cpecpiB733
CSPI05G03300Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G03300Bottle gourd (USVL1VR-Ls)cpilsiB381
CSPI05G03300Bottle gourd (USVL1VR-Ls)cpilsiB382
CSPI05G03300Melon (DHL92) v3.6.1cpimedB394
CSPI05G03300Melon (DHL92) v3.6.1cpimedB400
CSPI05G03300Melon (DHL92) v3.6.1cpimedB401
CSPI05G03300Cucumber (Gy14) v2cgybcpiB126
CSPI05G03300Cucumber (Gy14) v2cgybcpiB226