CSPI05G03120 (gene) Wild cucumber (PI 183967)

NameCSPI05G03120
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAlpha/beta fold hydrolase
LocationChr5 : 3481563 .. 3482381 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTATTTGTTTACAACGACCAGGCACGATGTTATTGCTCAGATGTATTATGCTAGAAGACTTGCCGAAAAGCTGTATCCTGTTGCTAGAATGGTAGATCTCCATGGAGGTCATCTAGTCAGTCGAGAGAGAACCGAAGAGGTGTATTATTTTCACCACAATCGATCTAAATATCGTTTTTCACTATGTCTAGTTGACAACAGAAACTGATGAGATAAGTTTGTTTTCTATGAAAATTTAGGTAAATCAAGCTCTTCTTGACTTAATCAGAGCCTCAGAAACAAAGATGAGTCCACATGATTGGACAAACTTGCCAAAGAAAAGCTCATGTGAGTGTTTTTCTTTTAGTATTCCTCTGTTTCTCTTTGGTTCTTGGGAAATGCTGAAAAATACTTTCTTCCTAACAGGGTGGATGGAGGAGAGAATGGCTTTTGTAACAATGAAGACTGAAGGAGGAAGCAGTATCTCCTCCAAACCTTTCTTGTTAGAGAAACTCCATCTTTTCTTCTTGTATTTCTTTGGTCTGATTCTTTTGATTTTCGGGTATCTCCGGAACACCATCAAAAGTTTGAAACCCACCCGAGTTGGAGCCACCCTTACGTGAATAAACATTCCAAAGACCCTAAATTTTTACAGGTGAGTTATCTGAATATCCTCTACTTTCATTGAACTCAAACTAAAAGAGAGAAGTGTATAAGTTGGTTTTTGCTTCAACTTTGTTGCAGAGTCTTTCATTTTTGCTATGTGATGGGCAATGCTCCAACCGTCAAAGTGAAGTTGGGGAATGAGTTCTCTTCTAATATTGAGAACTTTTAA

mRNA sequence

ATGACTTATTTGTTTACAACGACCAGGCACGATGTTATTGCTCAGATGTATTATGCTAGAAGACTTGCCGAAAAGCTGTATCCTGTTGCTAGAATGGTAGATCTCCATGGAGGTCATCTAGTCAGTCGAGAGAGAACCGAAGAGGTAAATCAAGCTCTTCTTGACTTAATCAGAGCCTCAGAAACAAAGATGAGTCCACATGATTGGACAAACTTGCCAAAGAAAAGCTCATGGTGGATGGAGGAGAGAATGGCTTTTGTAACAATGAAGACTGAAGGAGGAAGCAGTATCTCCTCCAAACCTTTCTTGTTAGAGAAACTCCATCTTTTCTTCTTGTATTTCTTTGGTCTGATTCTTTTGATTTTCGGAGTCTTTCATTTTTGCTATGTGATGGGCAATGCTCCAACCGTCAAAGTGAAGTTGGGGAATGAGTTCTCTTCTAATATTGAGAACTTTTAA

Coding sequence (CDS)

ATGACTTATTTGTTTACAACGACCAGGCACGATGTTATTGCTCAGATGTATTATGCTAGAAGACTTGCCGAAAAGCTGTATCCTGTTGCTAGAATGGTAGATCTCCATGGAGGTCATCTAGTCAGTCGAGAGAGAACCGAAGAGGTAAATCAAGCTCTTCTTGACTTAATCAGAGCCTCAGAAACAAAGATGAGTCCACATGATTGGACAAACTTGCCAAAGAAAAGCTCATGGTGGATGGAGGAGAGAATGGCTTTTGTAACAATGAAGACTGAAGGAGGAAGCAGTATCTCCTCCAAACCTTTCTTGTTAGAGAAACTCCATCTTTTCTTCTTGTATTTCTTTGGTCTGATTCTTTTGATTTTCGGAGTCTTTCATTTTTGCTATGTGATGGGCAATGCTCCAACCGTCAAAGTGAAGTTGGGGAATGAGTTCTCTTCTAATATTGAGAACTTTTAA
BLAST of CSPI05G03120 vs. TrEMBL
Match: A0A0A0KLW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139370 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLI+ASETKMSPHD
Sbjct: 269 RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIKASETKMSPHD 328

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG 124
           WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG
Sbjct: 329 WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG 383

BLAST of CSPI05G03120 vs. TrEMBL
Match: A0A151TYE6_CAJCA (Epoxide hydrolase 2 OS=Cajanus cajan GN=KK1_004674 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLAEKL+PVARMVDLHGGHLVS ER++EVNQAL DLI+ASE KMSPHD
Sbjct: 265 RHDIIAQLYYAKRLAEKLHPVARMVDLHGGHLVSHERSDEVNQALFDLIKASEMKMSPHD 324

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPK  SWW E+R+  +T   + GS++S K F+LEKLHL  LYFFG+I+L+F
Sbjct: 325 WTNLPKTESWWKEKRLLIIT-NIQAGSNVSFKCFMLEKLHLCLLYFFGIIVLVF 377

BLAST of CSPI05G03120 vs. TrEMBL
Match: A0A0S3RMY7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G184800 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-37
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLA++LYPVARMVDLHGGHLVS ER EEVNQAL DLI+ASE  M+PHD
Sbjct: 264 RHDIIAQIYYAKRLAQRLYPVARMVDLHGGHLVSHERPEEVNQALFDLIKASEVNMNPHD 323

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPKK SWW E+R+  +T   + G + S K  +LEKLH+F LYFFGL++L F
Sbjct: 324 WTNLPKKQSWWKEKRVLIIT-NNQAGRNDSLKCHVLEKLHIFLLYFFGLLMLAF 376

BLAST of CSPI05G03120 vs. TrEMBL
Match: A0A0B2PRT9_GLYSO (Putative aminoacrylate hydrolase RutD OS=Glycine soja GN=glysoja_044510 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-37
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLAEKL+PVARMVDLHGGHLVS ER+EEVNQAL DLI+AS+  MSPHD
Sbjct: 259 RHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHD 318

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPKK SWW E+R+  +    + GS++S    +LEKLHLF LY FGL++L F
Sbjct: 319 WTNLPKKESWWKEKRV-LIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAF 371

BLAST of CSPI05G03120 vs. TrEMBL
Match: I1MAK4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G162400 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-37
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLAEKL+PVARMVDLHGGHLVS ER+EEVNQAL DLI+AS+  MSPHD
Sbjct: 261 RHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHD 320

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPKK SWW E+R+  +    + GS++S    +LEKLHLF LY FGL++L F
Sbjct: 321 WTNLPKKESWWKEKRV-LIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAF 373

BLAST of CSPI05G03120 vs. TAIR10
Match: AT5G53050.2 (AT5G53050.2 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-31
Identity = 67/114 (58.77%), Postives = 84/114 (73.68%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHDVIAQ+ YARRLA++LYPVARMVDLHGGHLVS ERTEEVN+ALL+LI+ASE K    D
Sbjct: 263 RHDVIAQICYARRLAQRLYPVARMVDLHGGHLVSHERTEEVNKALLELIKASEMKKISTD 322

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNL  ++  + + R+  +   TEG +  S   F+ EK H F L+ FGL++L F
Sbjct: 323 WTNLTMETPGYFKRRLTLIRSSTEGKNVASPAHFIAEKFHGFLLFLFGLLVLAF 376

BLAST of CSPI05G03120 vs. NCBI nr
Match: gi|449456391|ref|XP_004145933.1| (PREDICTED: uncharacterized protein LOC101203096 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 2.9e-57
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLI+ASETKMSPHD
Sbjct: 269 RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIKASETKMSPHD 328

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG 124
           WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG
Sbjct: 329 WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG 383

BLAST of CSPI05G03120 vs. NCBI nr
Match: gi|659074446|ref|XP_008437608.1| (PREDICTED: uncharacterized protein LOC103482970 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 4.9e-57
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD
Sbjct: 269 RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 328

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIFG 124
           WTNLPKKSSWWMEERMAFVTMKTEGGSSISS+PFLLEKLHLFFLYFFGLILL+FG
Sbjct: 329 WTNLPKKSSWWMEERMAFVTMKTEGGSSISSQPFLLEKLHLFFLYFFGLILLVFG 383

BLAST of CSPI05G03120 vs. NCBI nr
Match: gi|1012360910|gb|KYP72093.1| (Epoxide hydrolase 2 [Cajanus cajan])

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-39
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLAEKL+PVARMVDLHGGHLVS ER++EVNQAL DLI+ASE KMSPHD
Sbjct: 265 RHDIIAQLYYAKRLAEKLHPVARMVDLHGGHLVSHERSDEVNQALFDLIKASEMKMSPHD 324

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPK  SWW E+R+  +T   + GS++S K F+LEKLHL  LYFFG+I+L+F
Sbjct: 325 WTNLPKTESWWKEKRLLIIT-NIQAGSNVSFKCFMLEKLHLCLLYFFGIIVLVF 377

BLAST of CSPI05G03120 vs. NCBI nr
Match: gi|965666443|dbj|BAT81931.1| (hypothetical protein VIGAN_03184800 [Vigna angularis var. angularis])

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLA++LYPVARMVDLHGGHLVS ER EEVNQAL DLI+ASE  M+PHD
Sbjct: 264 RHDIIAQIYYAKRLAQRLYPVARMVDLHGGHLVSHERPEEVNQALFDLIKASEVNMNPHD 323

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPKK SWW E+R+  +T   + G + S K  +LEKLH+F LYFFGL++L F
Sbjct: 324 WTNLPKKQSWWKEKRVLIIT-NNQAGRNDSLKCHVLEKLHIFLLYFFGLLMLAF 376

BLAST of CSPI05G03120 vs. NCBI nr
Match: gi|734344311|gb|KHN10404.1| (Putative aminoacrylate hydrolase RutD [Glycine soja])

HSP 1 Score: 161.8 bits (408), Expect = 9.7e-37
Identity = 78/114 (68.42%), Postives = 94/114 (82.46%), Query Frame = 1

Query: 9   RHDVIAQMYYARRLAEKLYPVARMVDLHGGHLVSRERTEEVNQALLDLIRASETKMSPHD 68
           RHD+IAQ+YYA+RLAEKL+PVARMVDLHGGHLVS ER+EEVNQAL DLI+AS+  MSPHD
Sbjct: 259 RHDIIAQIYYAKRLAEKLHPVARMVDLHGGHLVSHERSEEVNQALFDLIKASKVNMSPHD 318

Query: 69  WTNLPKKSSWWMEERMAFVTMKTEGGSSISSKPFLLEKLHLFFLYFFGLILLIF 123
           WTNLPKK SWW E+R+  +    + GS++S    +LEKLHLF LY FGL++L F
Sbjct: 319 WTNLPKKESWWKEKRV-LIRTNIQAGSNVSLNCCMLEKLHLFLLYLFGLLVLAF 371

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLW7_CUCSA2.0e-5799.13Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139370 PE=4 SV=1[more]
A0A151TYE6_CAJCA1.9e-3971.05Epoxide hydrolase 2 OS=Cajanus cajan GN=KK1_004674 PE=4 SV=1[more]
A0A0S3RMY7_PHAAN2.3e-3768.42Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G184800 PE=... [more]
A0A0B2PRT9_GLYSO6.7e-3768.42Putative aminoacrylate hydrolase RutD OS=Glycine soja GN=glysoja_044510 PE=4 SV=... [more]
I1MAK4_SOYBN6.7e-3768.42Uncharacterized protein OS=Glycine max GN=GLYMA_14G162400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G53050.23.8e-3158.77 alpha/beta-Hydrolases superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449456391|ref|XP_004145933.1|2.9e-5799.13PREDICTED: uncharacterized protein LOC101203096 [Cucumis sativus][more]
gi|659074446|ref|XP_008437608.1|4.9e-5798.26PREDICTED: uncharacterized protein LOC103482970 [Cucumis melo][more]
gi|1012360910|gb|KYP72093.1|2.7e-3971.05Epoxide hydrolase 2 [Cajanus cajan][more]
gi|965666443|dbj|BAT81931.1|3.3e-3768.42hypothetical protein VIGAN_03184800 [Vigna angularis var. angularis][more]
gi|734344311|gb|KHN10404.1|9.7e-3768.42Putative aminoacrylate hydrolase RutD [Glycine soja][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G03120.1CSPI05G03120.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10992ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEINcoord: 4..59
score: 2.1
NoneNo IPR availablePANTHERPTHR10992:SF699SUBFAMILY NOT NAMEDcoord: 4..59
score: 2.1

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G03120Wax gourdcpiwgoB456
CSPI05G03120Wax gourdcpiwgoB484
CSPI05G03120Wild cucumber (PI 183967)cpicpiB110
CSPI05G03120Wild cucumber (PI 183967)cpicpiB114
CSPI05G03120Cucumber (Gy14) v1cgycpiB004
CSPI05G03120Cucumber (Gy14) v1cgycpiB322
CSPI05G03120Cucumber (Gy14) v1cgycpiB387
CSPI05G03120Cucurbita maxima (Rimu)cmacpiB298
CSPI05G03120Cucurbita maxima (Rimu)cmacpiB346
CSPI05G03120Cucurbita maxima (Rimu)cmacpiB425
CSPI05G03120Cucurbita maxima (Rimu)cmacpiB618
CSPI05G03120Cucurbita moschata (Rifu)cmocpiB257
CSPI05G03120Cucurbita moschata (Rifu)cmocpiB288
CSPI05G03120Cucurbita moschata (Rifu)cmocpiB337
CSPI05G03120Cucurbita moschata (Rifu)cmocpiB414
CSPI05G03120Cucurbita moschata (Rifu)cmocpiB611
CSPI05G03120Cucumber (Chinese Long) v2cpicuB221
CSPI05G03120Cucumber (Chinese Long) v2cpicuB224
CSPI05G03120Cucumber (Chinese Long) v2cpicuB240
CSPI05G03120Melon (DHL92) v3.5.1cpimeB348
CSPI05G03120Melon (DHL92) v3.5.1cpimeB399
CSPI05G03120Melon (DHL92) v3.5.1cpimeB404
CSPI05G03120Watermelon (Charleston Gray)cpiwcgB379
CSPI05G03120Watermelon (Charleston Gray)cpiwcgB410
CSPI05G03120Watermelon (Charleston Gray)cpiwcgB413
CSPI05G03120Watermelon (97103) v1cpiwmB406
CSPI05G03120Watermelon (97103) v1cpiwmB416
CSPI05G03120Watermelon (97103) v1cpiwmB411
CSPI05G03120Cucurbita pepo (Zucchini)cpecpiB038
CSPI05G03120Cucurbita pepo (Zucchini)cpecpiB189
CSPI05G03120Cucurbita pepo (Zucchini)cpecpiB227
CSPI05G03120Cucurbita pepo (Zucchini)cpecpiB624
CSPI05G03120Cucurbita pepo (Zucchini)cpecpiB733
CSPI05G03120Bottle gourd (USVL1VR-Ls)cpilsiB322
CSPI05G03120Bottle gourd (USVL1VR-Ls)cpilsiB381
CSPI05G03120Bottle gourd (USVL1VR-Ls)cpilsiB382
CSPI05G03120Melon (DHL92) v3.6.1cpimedB338
CSPI05G03120Melon (DHL92) v3.6.1cpimedB394
CSPI05G03120Melon (DHL92) v3.6.1cpimedB401
CSPI05G03120Cucumber (Gy14) v2cgybcpiB126
CSPI05G03120Cucumber (Gy14) v2cgybcpiB226
CSPI05G03120Silver-seed gourdcarcpiB0305
CSPI05G03120Silver-seed gourdcarcpiB0543
CSPI05G03120Silver-seed gourdcarcpiB0576
CSPI05G03120Silver-seed gourdcarcpiB1029
CSPI05G03120Cucumber (Chinese Long) v3cpicucB263
CSPI05G03120Cucumber (Chinese Long) v3cpicucB266
CSPI05G03120Cucumber (Chinese Long) v3cpicucB285
CSPI05G03120Watermelon (97103) v2cpiwmbB349
CSPI05G03120Watermelon (97103) v2cpiwmbB399
CSPI05G03120Watermelon (97103) v2cpiwmbB403