CSPI05G02650 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G02650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 3239091 .. 3239810 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACTTGCAACTTCAACCTTCAAATGAAGTTCCAAGAAACTTCCTTTCTTTCTCTTTAAAAAACAAATGTGTCATAGTGTAAAATCAAAAAAGGCTGTACAAGGCAGCTCTTGAAAACTTCTTCACCATTACTCTCTTTTTCCTCTATGGAAAATGGTATGCAAATTAGAAGAGAGGAAGGAAATCATGAAACTATCAAACCAAATTGCAATGGCCAAGCTCCCAACATCTTTCACTCTTCCAACAATAATCTTAAAATCAATATTGTTTTTGTCTTTGAACAGTCTTACAATCCTCTTGTTATTTGCAGGCAGTGCAGTGGGGACTGTAATTTTTCACGGTTTTCCTTCCTCTGCCATTGATGCCTTTATTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTCCTCAAAGGCACAAATTAGCAAGATTTTGTGCCTTGTATTCTCTGGCTTCCCTGGCTTCCGCTCTGCTTCTGCTGATTTGGGGCCTGTATCATACACTCATTCTTGGCAAAGCTCAGAGTGCTTTATGACCTTAGAATATGTTTGGTTCTGGTTTTTGTTAAACCCCTTTTGAGCTTTGAATCTAAATATTCTCCCAAGTGTTTTCAGTAATGTTTGCAAATAGTTAAGAATATGAAGAAGATCTGTTAATTCACCTGTACGTCGTACTTTTAAGCCATCTTTTTTAGTTGAATCCCTTC

mRNA sequence

ATGGTATGCAAATTAGAAGAGAGGAAGGAAATCATGAAACTATCAAACCAAATTGCAATGGCCAAGCTCCCAACATCTTTCACTCTTCCAACAATAATCTTAAAATCAATATTGTTTTTGTCTTTGAACAGTCTTACAATCCTCTTGTTATTTGCAGGCAGTGCAGTGGGGACTGTAATTTTTCACGGTTTTCCTTCCTCTGCCATTGATGCCTTTATTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTCCTCAAAGGCACAAATTAGCAAGATTTTGTGCCTTGTATTCTCTGGCTTCCCTGGCTTCCGCTCTGCTTCTGCTGATTTGGGGCCTGTATCATACACTCATTCTTGGCAAAGCTCAGAGTGCTTTATGA

Coding sequence (CDS)

ATGGTATGCAAATTAGAAGAGAGGAAGGAAATCATGAAACTATCAAACCAAATTGCAATGGCCAAGCTCCCAACATCTTTCACTCTTCCAACAATAATCTTAAAATCAATATTGTTTTTGTCTTTGAACAGTCTTACAATCCTCTTGTTATTTGCAGGCAGTGCAGTGGGGACTGTAATTTTTCACGGTTTTCCTTCCTCTGCCATTGATGCCTTTATTATTTCAATTGTCTTTGCTTTTTCAGGTGCTTTGAGTGCTCTTTTGGTTCCTCAAAGGCACAAATTAGCAAGATTTTGTGCCTTGTATTCTCTGGCTTCCCTGGCTTCCGCTCTGCTTCTGCTGATTTGGGGCCTGTATCATACACTCATTCTTGGCAAAGCTCAGAGTGCTTTATGA
Homology
[Close]
BLAST of CSPI05G02650 vs. TrEMBL
Match: A0A0A0KLQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137420 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-58
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 1 

Query: 1   MVCKLEERKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI 60
           MVCKLE+RKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI
Sbjct: 1   MVCKLEKRKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI 60

Query: 61  FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH 120
           FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH
Sbjct: 61  FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH 120

Query: 121 TLILGKAQSAL 132
           TLILGKAQSAL
Sbjct: 121 TLILGKAQSAL 131

[Close]
BLAST of CSPI05G02650 vs. TrEMBL
Match: A0A0A0KN11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137400 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.9e-10
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 1 

Query: 1   MVCKLEERKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAV---G 60
           M CKLE+ K     SNQI+           T +L SILF+S N+LTIL+  +  +     
Sbjct: 1   MRCKLEKMK-----SNQISS----------TTLLNSILFVSFNTLTILMFLSARSKDLRS 60

Query: 61  TVIFHG--FPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLI 120
            VIF+   +PS A DAF++SI F+FS AL ALL+P +  LA + A YS+A +A AL LLI
Sbjct: 61  LVIFNALSYPSFAFDAFVLSITFSFSTALGALLIPNKPILAIYYAFYSVAFMAFALFLLI 110

[Close]
BLAST of CSPI05G02650 vs. TrEMBL
Match: A0A061E956_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011399 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-09
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 16  NQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFPSSAID 75
           + ++ +++ +S  + T IL+SILF+S    TIL+L       GS V  ++F G P++   
Sbjct: 18  HHVSFSEMLSSIAVQTTILESILFISFTVATILILLPHEYVKGSPVPIIVFKGHPAT-FH 77

Query: 76  AFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGL 119
           AF I I+FAFSGA  AL+ P   ++A  C  YS+AS+ASA+ LLIW +
Sbjct: 78  AFTICIIFAFSGAFCALMTPNSPRIASLCGCYSIASMASAIGLLIWAV 124

[Close]
BLAST of CSPI05G02650 vs. TrEMBL
Match: A0A0A0KT20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G607970 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-08
Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1 

Query: 20  MAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFPSSAIDAFII 79
           + K  +S  + T +L SIL LS  ++T++LLF      G+ V  +IF G PS+   AF++
Sbjct: 31  LGKTCSSLDISTNLLYSILCLSFKTVTLILLFPYEQVNGNLVPAIIFKGLPST-FHAFLL 90

Query: 80  SIVFAFSGALSAL-LVPQRHKLARFCALYSLASLASALLLLIWGLYHTL 123
           SIV AFSGA +AL L   + K+A+FC+ YSL  + SA++L  W ++ T+
Sbjct: 91  SIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVLFFWAVFQTV 138

[Close]
BLAST of CSPI05G02650 vs. TrEMBL
Match: D7TA98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00800 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-06
Identity = 42/114 (36.84%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 11  IMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFP 70
           I ++      A+ P    +  + L  ILF+S +  T L++       G+ V T+IF G P
Sbjct: 23  IQQIRTTREFAESPPILPIQIVTLTVILFISFSIATSLMVVPSEQIDGNPVPTIIFKGHP 82

Query: 71  SSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLY 120
           S    AF+I + FAF+GAL+AL++  + K+ARFC+ +S+AS+ASA+ LL++ ++
Sbjct: 83  S-IFHAFVILVSFAFNGALTALMMENQSKIARFCSYFSIASMASAMSLLVFAIF 135

[Close]
BLAST of CSPI05G02650 vs. NCBI nr
Match: gi|700194632|gb|KGN49809.1| (hypothetical protein Csa_5G137420 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 8.6e-58
Identity = 130/131 (99.24%), Postives = 131/131 (100.00%), Query Frame = 1 

Query: 1   MVCKLEERKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI 60
           MVCKLE+RKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI
Sbjct: 1   MVCKLEKRKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAVGTVI 60

Query: 61  FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH 120
           FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH
Sbjct: 61  FHGFPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLYH 120

Query: 121 TLILGKAQSAL 132
           TLILGKAQSAL
Sbjct: 121 TLILGKAQSAL 131

[Close]
BLAST of CSPI05G02650 vs. NCBI nr
Match: gi|700194630|gb|KGN49807.1| (hypothetical protein Csa_5G137400 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 1 

Query: 1   MVCKLEERKEIMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFAGSAV---G 60
           M CKLE+ K     SNQI+           T +L SILF+S N+LTIL+  +  +     
Sbjct: 1   MRCKLEKMK-----SNQISS----------TTLLNSILFVSFNTLTILMFLSARSKDLRS 60

Query: 61  TVIFHG--FPSSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLI 120
            VIF+   +PS A DAF++SI F+FS AL ALL+P +  LA + A YS+A +A AL LLI
Sbjct: 61  LVIFNALSYPSFAFDAFVLSITFSFSTALGALLIPNKPILAIYYAFYSVAFMAFALFLLI 110

[Close]
BLAST of CSPI05G02650 vs. NCBI nr
Match: gi|590698395|ref|XP_007045703.1| (Uncharacterized protein TCM_011399 [Theobroma cacao])

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-09
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 16  NQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFPSSAID 75
           + ++ +++ +S  + T IL+SILF+S    TIL+L       GS V  ++F G P++   
Sbjct: 18  HHVSFSEMLSSIAVQTTILESILFISFTVATILILLPHEYVKGSPVPIIVFKGHPAT-FH 77

Query: 76  AFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGL 119
           AF I I+FAFSGA  AL+ P   ++A  C  YS+AS+ASA+ LLIW +
Sbjct: 78  AFTICIIFAFSGAFCALMTPNSPRIASLCGCYSIASMASAIGLLIWAV 124

[Close]
BLAST of CSPI05G02650 vs. NCBI nr
Match: gi|700196832|gb|KGN52009.1| (hypothetical protein Csa_5G607970 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 8.1e-08
Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1 

Query: 20  MAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFPSSAIDAFII 79
           + K  +S  + T +L SIL LS  ++T++LLF      G+ V  +IF G PS+   AF++
Sbjct: 31  LGKTCSSLDISTNLLYSILCLSFKTVTLILLFPYEQVNGNLVPAIIFKGLPST-FHAFLL 90

Query: 80  SIVFAFSGALSAL-LVPQRHKLARFCALYSLASLASALLLLIWGLYHTL 123
           SIV AFSGA +AL L   + K+A+FC+ YSL  + SA++L  W ++ T+
Sbjct: 91  SIVMAFSGAFNALMLATNKPKIAKFCSYYSLGFMVSAVVLFFWAVFQTV 138

[Close]
BLAST of CSPI05G02650 vs. NCBI nr
Match: gi|297738219|emb|CBI27420.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-06
Identity = 42/114 (36.84%), Postives = 70/114 (61.40%), Query Frame = 1 

Query: 11  IMKLSNQIAMAKLPTSFTLPTIILKSILFLSLNSLTILLLFA-----GSAVGTVIFHGFP 70
           I ++      A+ P    +  + L  ILF+S +  T L++       G+ V T+IF G P
Sbjct: 23  IQQIRTTREFAESPPILPIQIVTLTVILFISFSIATSLMVVPSEQIDGNPVPTIIFKGHP 82

Query: 71  SSAIDAFIISIVFAFSGALSALLVPQRHKLARFCALYSLASLASALLLLIWGLY 120
           S    AF+I + FAF+GAL+AL++  + K+ARFC+ +S+AS+ASA+ LL++ ++
Sbjct: 83  S-IFHAFVILVSFAFNGALTALMMENQSKIARFCSYFSIASMASAMSLLVFAIF 135

The following BLAST results are available for this feature:
BLAST of CSPI05G02650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G02650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLQ9_CUCSA6.0e-5899.24Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137420 PE=4 SV=1[more]
A0A0A0KN11_CUCSA7.9e-1045.60Uncharacterized protein OS=Cucumis sativus GN=Csa_5G137400 PE=4 SV=1[more]
A0A061E956_THECC3.9e-0941.67Uncharacterized protein OS=Theobroma cacao GN=TCM_011399 PE=4 SV=1[more]
A0A0A0KT20_CUCSA5.7e-0841.28Uncharacterized protein OS=Cucumis sativus GN=Csa_5G607970 PE=4 SV=1[more]
D7TA98_VITVI1.1e-0636.84Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g00800 PE=4 SV=... [more]
BLAST of CSPI05G02650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI05G02650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194632|gb|KGN49809.1|8.6e-5899.24hypothetical protein Csa_5G137420 [Cucumis sativus][more]
gi|700194630|gb|KGN49807.1|1.1e-0945.60hypothetical protein Csa_5G137400 [Cucumis sativus][more]
gi|590698395|ref|XP_007045703.1|5.6e-0941.67Uncharacterized protein TCM_011399 [Theobroma cacao][more]
gi|700196832|gb|KGN52009.1|8.1e-0841.28hypothetical protein Csa_5G607970 [Cucumis sativus][more]
gi|297738219|emb|CBI27420.3|1.5e-0636.84unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G02650.1CSPI05G02650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI05G02650Cla97C01G007750Watermelon (97103) v2cpiwmbB350
CSPI05G02650CsGy5G012720Cucumber (Gy14) v2cgybcpiB227
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI05G02650Cucumber (Chinese Long) v3cpicucB287
CSPI05G02650Wax gourdcpiwgoB441
CSPI05G02650Cucumber (Gy14) v1cgycpiB552
CSPI05G02650Cucurbita maxima (Rimu)cmacpiB307
CSPI05G02650Cucurbita maxima (Rimu)cmacpiB734
CSPI05G02650Cucurbita moschata (Rifu)cmocpiB299
CSPI05G02650Cucurbita moschata (Rifu)cmocpiB727
CSPI05G02650Cucumber (Chinese Long) v2cpicuB240
CSPI05G02650Melon (DHL92) v3.5.1cpimeB352
CSPI05G02650Watermelon (Charleston Gray)cpiwcgB380
CSPI05G02650Watermelon (97103) v1cpiwmB417
CSPI05G02650Cucurbita pepo (Zucchini)cpecpiB180
CSPI05G02650Cucurbita pepo (Zucchini)cpecpiB418
CSPI05G02650Bottle gourd (USVL1VR-Ls)cpilsiB323
CSPI05G02650Melon (DHL92) v3.6.1cpimedB342
CSPI05G02650Silver-seed gourdcarcpiB0516
CSPI05G02650Silver-seed gourdcarcpiB0862