CSPI05G01650 (gene) Wild cucumber (PI 183967)

NameCSPI05G01650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr5 : 2297727 .. 2297960 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGAGGAAGCTTTTAAGGAGGAAAGAGAAGATTCCAACCAAGACTACCTCATTGCTCTTTGAAGCTTCTGCCTTGCTAGTGACCTCAAATTTTCCCCCCAAAAACCCCATCAATTTTGGTTTCCTCCTCCCAATCTCTTTCTTCCTCGGCAAGATTTGGATCAAGATCAAGGCCCAAAAGACTTGTAAAAGCTCGAGTTTACCCTCACCTCTTCAAACCGTTTCCTAA

mRNA sequence

ATGGAGAAGAGGAAGCTTTTAAGGAGGAAAGAGAAGATTCCAACCAAGACTACCTCATTGCTCTTTGAAGCTTCTGCCTTGCTAGTGACCTCAAATTTTCCCCCCAAAAACCCCATCAATTTTGGTTTCCTCCTCCCAATCTCTTTCTTCCTCGGCAAGATTTGGATCAAGATCAAGGCCCAAAAGACTTGTAAAAGCTCGAGTTTACCCTCACCTCTTCAAACCGTTTCCTAA

Coding sequence (CDS)

ATGGAGAAGAGGAAGCTTTTAAGGAGGAAAGAGAAGATTCCAACCAAGACTACCTCATTGCTCTTTGAAGCTTCTGCCTTGCTAGTGACCTCAAATTTTCCCCCCAAAAACCCCATCAATTTTGGTTTCCTCCTCCCAATCTCTTTCTTCCTCGGCAAGATTTGGATCAAGATCAAGGCCCAAAAGACTTGTAAAAGCTCGAGTTTACCCTCACCTCTTCAAACCGTTTCCTAA
BLAST of CSPI05G01650 vs. TrEMBL
Match: A0A0A0KMR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077210 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1   MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA 60
           MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA
Sbjct: 375 MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA 434

Query: 61  QKTCKSSSLPSPLQTVS 78
           QKTCKSSSLPSPLQTVS
Sbjct: 435 QKTCKSSSLPSPLQTVS 451

BLAST of CSPI05G01650 vs. NCBI nr
Match: gi|700194525|gb|KGN49702.1| (hypothetical protein Csa_5G077210 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1

Query: 1   MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA 60
           MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA
Sbjct: 375 MEKRKLLRRKEKIPTKTTSLLFEASALLVTSNFPPKNPINFGFLLPISFFLGKIWIKIKA 434

Query: 61  QKTCKSSSLPSPLQTVS 78
           QKTCKSSSLPSPLQTVS
Sbjct: 435 QKTCKSSSLPSPLQTVS 451

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KMR3_CUCSA2.7e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077210 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700194525|gb|KGN49702.1|3.9e-34100.00hypothetical protein Csa_5G077210 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G01650.1CSPI05G01650.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None