CSPI05G00560 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTACTCTCTCCTTCCATTTCCCCCTTCTCTTCAACTCCTCTCTTTACTCTTTCTAATTTCCACTCTGCCTTTTCCTTTTCTCTCAAAATTTCTACCAAAATCGATCATCTCCTCTCTTCCTCTTCCATAATATTCCATTTCCACCGACACAGACCATGGAGGGTTCTAGTGCCAATGCAGTGATCCAGTTGAGAGATTCCATCCACAAATCTGGCTTCTCTACACAAGTAAACTAAACCCTTAATATTTGACTTCTTCTAATTATCTAGCTAGGGTCTCGTTTGCCAACTATTATGTTTTTGTTTTTATTTTTTTAAGTTTCTCAAAAGTTAAGTCTATTTCTTCCATTTTTCTTGACTACCATTGTTTGCGTCCTTTTTTTTTTTAGTAAAGAAGTTGAATTATTAGCAAGTTATCTTCTTGGGTTTTGAAACTTGGGTTTGGTGTTTTGAAGAAGAGTAAAAAAAAGTAGATAAGAATAAGAGTAGAGTAGGTGAAGTGGTGGGGTTGTAAACTTAATTATTCTAAGTAAAAAAATATATAAAGAGTAGCCTTAGCTTAATTGTGTGGCAGTGTGTTCTCTTAAAATTTTGTTTGTATTTACAGGATTACTCGGATGCAACGATGATGAGGTTTTTGATTGCGAGATCGATGGAAGTTCCGAAAGCAGCGAAGATGTTTGTGCAATGGAAGAAGTGGAGAGATGCAACGGTTCCGAAAGGATTGATCGCGGAATCGGAGGTTGAAGATGAGTTGAAAGCTAAGAAAATTTTCTTACAAGGAATGTCCACCAAACAACTCCCAGTCATGATAGTTATGGCCAATCGCCATTTTCATTCCAAGGATCAAGTCCAGTTTAAGAGTTAGTTTCTCCCCTCTCTCTCTTCAAACGTTTGGTTTCGCATTTAATGAGCTTTAAACTTTTGGAAATTTATTATTTTCTTAGAAAAATGTTTTTGGGACGTTTATGGACTTTTCTTACCTTTCTTTCTTTGGTGTATATATTTTTTTAAATGGGAAGAAGAAATAATTTAATTGTTTTTTGAATAGTAAAATAAATTAAAATATTTAGATTTTATACCTAAACTATTATTACTATCTATCCATACTACTATAAAAATATATCAGTGTTTGTGAGTGATAGAATCTAAATTTTATGTTGTAAATATTTTTGTTAAATTTGTTATTTTTGACCGCTTTCTTATAATTATTTTATTTTATAATTTGTAGTTATTAAGTTTCATACTACTATTACGTCACTGACACTATTCTTGTGATGATATTTTAGCTTTTTCAATTTTAATATTTGTACTTTCAATCAATCTAAAATATTTAATTTCAATCATGTAATGTTGAATATTTCAAAAAAGAAAAACTTTTCTTATGAATTTTAAAAATGTGGTTTTATCATTCCAAAAGTACATAATAAAAATGTGATTGACTTATTATATTTTGCACAAAAATTATTGGACTAAAATTAGATATTTGAAGGTAATGTGTAATTAAAATTATTTTTTTTTTATAAATAGTAAATCATTAATATGAGTTTACATATCATAGTCTTTGAAAATCAGATATGAATTTACACAGTACTATACATTTGTAAATACTCTAAATGTAAGAGTTATATTTAGAATGATTTATAGTTTAGAAATAATACTAATCATTAAAAAAACTCATAAGAATAACAACTTAAATTCATGCTTCAAAGAAAAGAAAATGGAAGCAACATAGTTGCTATCTATAAAATTAATGGCTGGATTATTTACTTTAAATGATGATTAAACTGAAAAAATTAATCTTAGTTGTTTCATAGTGTAAAACATATTTTTATTAAAAAAAAAGGATAAAAACAAAAAAGTAAAAAAAGATAGTTTAAGTTAATAAATAAACCTATTATAATAAGTAAACATGTCTAATCTTTTTTAGTGTATTTTTATATCTTTATAAAACAAATATCGATTCACTTCTGTTCCTTGAATTTGAACTCACCATGGATAAAAATTTAAAATTATGATTATAATAATTTGGAGGGTAAATTATCAAAATCTTATATGAAAATTAATGTAACGCCTCACGTCCAAGATTTGAACTAACATTCAGAATTCGGATCCCTAACATTTTCTTGCATATATCCAGCGACCTCACATATCATTACATGCCCTAGAGGCTTATTAGAGTGAAAATTCTTCCCATAAACCAATATGAATTCTTCCATCATATTTTGTCCACGTTCAAATGCATCTTAGAATTTTCAATAATATAATATAAATTATTAAATATTCTTCCTCGGAACATTTAATTAATCACAAGTTACACACAACAAACAATTCTCACAAACAAAAAAATATAATTAATAACAAGATAAATAAATATGACACCCAACTAAATCCAAGATAATTAAATAACCAAAATTTCAATAATATAATTAATTAATAAAATTAAAATTTTGGGATGTTACAATTAAGGATATGATGCATGTCATTTTAATTACTATCCTAACATTTTGTATCTTGATGTTTGTCCAAATTTTAAAGAAATTATACTGTAATAATGGTAGGTGTGAAACACACATTGTGAATGGTGATGAGTTGTTTGAGTAAATTATGAGCTAACAACACAAATCATGTAATTTTGTTTATTATTATTGTTGTTGAAACTCTGTCTGTTGTATGCAGAGTTTATAGTTCATCTCTTGGACAAGGTGATTGCAAGGTGAGAGACCACACCATTTTAATTACAATGAAAAGAATTCAGAATCATTATTAGTTAGTAATAGGTTTTGTGTTTACTTAATACTTTTTTAAAGTATGTTTTATTATTCTGGACACTTTATATATATCATATGGACAGTGGTTGCAAAGGCAAAGAAATCGGGAATGAAAAGTGGATTGCCATTGTTGATCTTCAACAAATCTCATACAAGAATGTTGACCCACGTGGACTCATCACAGCCTTTCAATTTTTACAGGTATATATATCCTATAACGAAGCTGACAATGTCAAGTTCTTTTCAGGTTTTATGTTATTTCTACCTCTGACACTTTGGTTCCTTACATTAGAACATTTATTTATTGAGTGGTGCTTCCAAAATAATGACAAAATATTAAAGTATAGGTTATGGAAGTTTTAGGTTATCATTGTGTATAAAAGTAAAAATGTTGCAGAATTACTATCCAGAACGCTTGGCGAAGTGCTTCATTCTAAACATGCCATGGTTTTTCGTTAGCATTTGGAGAATGATTTCTCGTTTTGTTGACACTGCAACGCTAAAAAATGTAAGCATTCCTTTTTATCTAATCAATAAAAAGATGTCAACTTAATTGAGGTGTTTTGGGTGTATAGTACTCTCCCTCCTCTATCTCTCATATCTTGTTAGAAAAAGTAAAAGGATGCATGTATTATAATAGTTAGTATTTTGTGCTCACAATTTGATTATATGCATAAAACAATACTTTTCAGATTTTAATTGTGAGCAGTGAAGAAGAAAAAAGGATTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAATTGAGTACGGTGGAAAGGCAAAGTTTATTGTTCTTCAAGATGTGGTTCTTCCTCACTTACATGGTTGAATATAATGTTGTGGATTTTTGTTCAATGATTACTTGTAATATGTTAAATTATTAAACCTTAAACTATCATTTTCTTCTTCTTATGATGAAATTTGTTTAATTTTAATTTTTATCAATTTTAGTTTTTATATCTTTTCAGT ATGGAGGGTTCTAGTGCCAATGCAGTGATCCAGTTGAGAGATTCCATCCACAAATCTGGCTTCTCTACACAAGATTACTCGGATGCAACGATGATGAGGTTTTTGATTGCGAGATCGATGGAAGTTCCGAAAGCAGCGAAGATGTTTGTGCAATGGAAGAAGTGGAGAGATGCAACGGTTCCGAAAGGATTGATCGCGGAATCGGAGGTTGAAGATGAGTTGAAAGCTAAGAAAATTTTCTTACAAGGAATGTCCACCAAACAACTCCCAGTCATGATAGTTATGGCCAATCGCCATTTTCATTCCAAGGATCAAGTCCAGTTTAAGAAGTTTATAGTTCATCTCTTGGACAAGGTGATTGCAAGTGGTTGCAAAGGCAAAGAAATCGGGAATGAAAAGTGGATTGCCATTGTTGATCTTCAACAAATCTCATACAAGAATGTTGACCCACGTGGACTCATCACAGCCTTTCAATTTTTACAGAATTACTATCCAGAACGCTTGGCGAAGTGCTTCATTCTAAACATGCCATGGTTTTTCGTTAGCATTTGGAGAATGATTTCTCGTTTTGTTGACACTGCAACGCTAAAAAATATTTTAATTGTGAGCAGTGAAGAAGAAAAAAGGATTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAATTGAGTACGGTGGAAAGGCAAAGTTTATTGTTCTTCAAGATGTGGTTCTTCCTCACTTACATGGTTGA ATGGAGGGTTCTAGTGCCAATGCAGTGATCCAGTTGAGAGATTCCATCCACAAATCTGGCTTCTCTACACAAGATTACTCGGATGCAACGATGATGAGGTTTTTGATTGCGAGATCGATGGAAGTTCCGAAAGCAGCGAAGATGTTTGTGCAATGGAAGAAGTGGAGAGATGCAACGGTTCCGAAAGGATTGATCGCGGAATCGGAGGTTGAAGATGAGTTGAAAGCTAAGAAAATTTTCTTACAAGGAATGTCCACCAAACAACTCCCAGTCATGATAGTTATGGCCAATCGCCATTTTCATTCCAAGGATCAAGTCCAGTTTAAGAAGTTTATAGTTCATCTCTTGGACAAGGTGATTGCAAGTGGTTGCAAAGGCAAAGAAATCGGGAATGAAAAGTGGATTGCCATTGTTGATCTTCAACAAATCTCATACAAGAATGTTGACCCACGTGGACTCATCACAGCCTTTCAATTTTTACAGAATTACTATCCAGAACGCTTGGCGAAGTGCTTCATTCTAAACATGCCATGGTTTTTCGTTAGCATTTGGAGAATGATTTCTCGTTTTGTTGACACTGCAACGCTAAAAAATATTTTAATTGTGAGCAGTGAAGAAGAAAAAAGGATTATGATAGAGGAAGTTGGAGAAGAAGTATTGCCAATTGAGTACGGTGGAAAGGCAAAGTTTATTGTTCTTCAAGATGTGGTTCTTCCTCACTTACATGGTTGA
BLAST of CSPI05G00560 vs. Swiss-Prot
Match: SEC14_SCHPO (Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.6e-12 Identity = 59/232 (25.43%), Postives = 110/232 (47.41%), Query Frame = 1
BLAST of CSPI05G00560 vs. Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-11 Identity = 54/221 (24.43%), Postives = 110/221 (49.77%), Query Frame = 1
BLAST of CSPI05G00560 vs. Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.5e-07 Identity = 57/256 (22.27%), Postives = 110/256 (42.97%), Query Frame = 1
BLAST of CSPI05G00560 vs. Swiss-Prot
Match: SFH7_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 OS=Arabidopsis thaliana GN=SFH7 PE=2 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 9.7e-07 Identity = 54/211 (25.59%), Postives = 96/211 (45.50%), Query Frame = 1
BLAST of CSPI05G00560 vs. Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 48/183 (26.23%), Postives = 83/183 (45.36%), Query Frame = 1
BLAST of CSPI05G00560 vs. TrEMBL
Match: A0A0A0KL83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G021320 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 4.0e-132 Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 1
BLAST of CSPI05G00560 vs. TrEMBL
Match: V7C784_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G016900g PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.5e-86 Identity = 154/241 (63.90%), Postives = 196/241 (81.33%), Query Frame = 1
BLAST of CSPI05G00560 vs. TrEMBL
Match: A0A0B2Q2A6_GLYSO (CRAL-TRIO domain-containing protein OS=Glycine soja GN=glysoja_036328 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 7.3e-86 Identity = 157/241 (65.15%), Postives = 193/241 (80.08%), Query Frame = 1
BLAST of CSPI05G00560 vs. TrEMBL
Match: I1JDI4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G086000 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 7.3e-86 Identity = 157/241 (65.15%), Postives = 193/241 (80.08%), Query Frame = 1
BLAST of CSPI05G00560 vs. TrEMBL
Match: A0A0S3T192_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G022300 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.1e-85 Identity = 150/234 (64.10%), Postives = 192/234 (82.05%), Query Frame = 1
BLAST of CSPI05G00560 vs. TAIR10
Match: AT1G14820.3 (AT1G14820.3 Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 272.3 bits (695), Expect = 2.9e-73 Identity = 133/240 (55.42%), Postives = 178/240 (74.17%), Query Frame = 1
BLAST of CSPI05G00560 vs. TAIR10
Match: AT1G01630.1 (AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 151.8 bits (382), Expect = 5.6e-37 Identity = 77/214 (35.98%), Postives = 128/214 (59.81%), Query Frame = 1
BLAST of CSPI05G00560 vs. TAIR10
Match: AT1G75170.1 (AT1G75170.1 Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 85.5 bits (210), Expect = 5.0e-17 Identity = 63/213 (29.58%), Postives = 103/213 (48.36%), Query Frame = 1
BLAST of CSPI05G00560 vs. TAIR10
Match: AT4G36640.1 (AT4G36640.1 Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 69/226 (30.53%), Postives = 109/226 (48.23%), Query Frame = 1
BLAST of CSPI05G00560 vs. TAIR10
Match: AT1G22180.2 (AT1G22180.2 Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 68.6 bits (166), Expect = 6.3e-12 Identity = 51/208 (24.52%), Postives = 97/208 (46.63%), Query Frame = 1
BLAST of CSPI05G00560 vs. NCBI nr
Match: gi|449449018|ref|XP_004142262.1| (PREDICTED: sec14 cytosolic factor-like [Cucumis sativus]) HSP 1 Score: 478.8 bits (1231), Expect = 5.7e-132 Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 1
BLAST of CSPI05G00560 vs. NCBI nr
Match: gi|659102990|ref|XP_008452419.1| (PREDICTED: SEC14 cytosolic factor-like [Cucumis melo]) HSP 1 Score: 445.7 bits (1145), Expect = 5.3e-122 Identity = 221/242 (91.32%), Postives = 231/242 (95.45%), Query Frame = 1
BLAST of CSPI05G00560 vs. NCBI nr
Match: gi|593705725|ref|XP_007153219.1| (hypothetical protein PHAVU_003G016900g [Phaseolus vulgaris]) HSP 1 Score: 327.4 bits (838), Expect = 2.1e-86 Identity = 154/241 (63.90%), Postives = 196/241 (81.33%), Query Frame = 1
BLAST of CSPI05G00560 vs. NCBI nr
Match: gi|356499583|ref|XP_003518618.1| (PREDICTED: phosphatidylinositol transfer protein CSR1 isoform X1 [Glycine max]) HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85 Identity = 157/241 (65.15%), Postives = 193/241 (80.08%), Query Frame = 1
BLAST of CSPI05G00560 vs. NCBI nr
Match: gi|920703032|gb|KOM46257.1| (hypothetical protein LR48_Vigan06g156300 [Vigna angularis]) HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84 Identity = 150/234 (64.10%), Postives = 192/234 (82.05%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |