CSPI04G27750 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G27750
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionBeta-galactosidase
LocationChr4 : 24409860 .. 24410105 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGAGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGGTTTGTAA

mRNA sequence

ATGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGAGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGGTTTGTAA

Coding sequence (CDS)

ATGCCTTATGATTATGATGAACTACTCGATGAATATGGGAACTCAAATCAACCCAAATTGAGGCATCTCAAACAACTCTATGCATCCATCAAATTGGAAGATAAGATCCTCACAAATGGCACTCGCTCGAACCAAGATTATGGTAGTTCTGTCACTTTAATGAAGTTCTCCAACCCATCAACAGGGGAGAGGTTTTGCTTCTTAAGCAACACAGATGGTAGCAATGATGCAACCATAGGTTTGTAA
Homology
[Close]
BLAST of CSPI04G27750 vs. Swiss-Prot
Match: BGAL_BRAOL (Beta-galactosidase OS=Brassica oleracea PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.3e-11
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN NQPK  HLKQL+  +K  +K LT G  S  D G+SVT   +S  +  
Sbjct: 312 YDYDAPLDEYGNLNQPKWGHLKQLHTLLKSMEKPLTYGNISTIDLGNSVTATVYS--TNE 371

Query: 63  ERFCFLSNTDGSNDATI 80
           +  CF+ N + + DA +
Sbjct: 372 KSSCFIGNVNATADALV 386

[Close]
BLAST of CSPI04G27750 vs. Swiss-Prot
Match: BGA13_ORYSJ (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-10
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN  QPK  HLK L++ IK  +KIL +G   + +Y  +VT+ K++  ST 
Sbjct: 319 YDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDANYSDNVTVTKYTLGSTS 378

Query: 63  ERFCFLSNTDGSNDATIGL 82
              CF++N + + D  + L
Sbjct: 379 A--CFINNRNDNKDLNVTL 395

[Close]
BLAST of CSPI04G27750 vs. Swiss-Prot
Match: BGA10_ORYSJ (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-10
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN  QPK  HLK L++ IK  +KIL +G   + +Y   VT+ K++  ST 
Sbjct: 300 YDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDTNYSDKVTVTKYTLDSTS 359

Query: 63  ERFCFLSNTDGSNDATIGL 82
              CF++N + + D  + L
Sbjct: 360 A--CFINNRNDNMDVNVTL 376

[Close]
BLAST of CSPI04G27750 vs. Swiss-Prot
Match: BGAL1_ORYSJ (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 9.2e-10
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN  QPK  HLK+L++ +K  +K L +G   + +YG ++T+ K++  S+ 
Sbjct: 319 YDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSS 378

Query: 63  ERFCFLSNTDGSNDATIGL 82
              CF++N     D  + L
Sbjct: 379 A--CFINNRFDDKDVNVTL 395

[Close]
BLAST of CSPI04G27750 vs. Swiss-Prot
Match: BGA14_ORYSJ (Beta-galactosidase 14 OS=Oryza sativa subsp. japonica GN=Os10g0340600 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09
Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN  QPK  HLK+L++ +   +KIL +G   + +YG +VT+ K++  +T 
Sbjct: 319 YDYDAPLDEYGNLRQPKYGHLKELHSVLMSMEKILLHGDYIDTNYGDNVTVTKYTLNATS 378

Query: 63  ERFCFLSNTDGSNDATIGL 82
              CF++N     D  + L
Sbjct: 379 A--CFINNRFDDRDVNVTL 395

[Close]
BLAST of CSPI04G27750 vs. TrEMBL
Match: A0A0A0M006_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-27
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTN TRSNQ++GSSVTL KFSNP+TG
Sbjct: 308 YDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNSTRSNQNFGSSVTLTKFSNPTTG 367

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG NDATI L
Sbjct: 368 ERFCFLSNTDGKNDATIDL 386

[Close]
BLAST of CSPI04G27750 vs. TrEMBL
Match: A0A0A0KPJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168840 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-25
Identity = 59/79 (74.68%), Postives = 66/79 (83.54%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTN TRS+Q++G SVTLMKF NP+T 
Sbjct: 64  YDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNSTRSDQNFGGSVTLMKFFNPTTS 123

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG ND TI L
Sbjct: 124 ERFCFLSNTDGKNDVTIDL 142

[Close]
BLAST of CSPI04G27750 vs. TrEMBL
Match: A0A0A0LXX7_CUCSA (Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.4e-25
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL++SIKL +KILTNGT SN+ +GS VTL KFSNP+T 
Sbjct: 290 YDYNAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTHSNKTFGSFVTLTKFSNPTTK 349

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG+NDATI L
Sbjct: 350 ERFCFLSNTDGTNDATIDL 368

[Close]
BLAST of CSPI04G27750 vs. TrEMBL
Match: A0A0A0LYH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569550 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-23
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL+ASIK+ +KILTN TRS+Q   S VTL KFSNP++G
Sbjct: 64  YDYNAPLDEYGNLNQPKWGHLKQLHASIKMGEKILTNSTRSDQKISSFVTLTKFSNPTSG 123

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTD  NDATI L
Sbjct: 124 ERFCFLSNTDNKNDATIDL 142

[Close]
BLAST of CSPI04G27750 vs. TrEMBL
Match: I1MM62_SOYBN (Beta-galactosidase OS=Glycine max GN=GLYMA_16G083700 PE=3 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 5.8e-19
Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           Y+YD  LDEYGN NQPK  HLKQL+A+IKL +KI+TNGTR+++D+G+ VTL  +++ + G
Sbjct: 313 YEYDAPLDEYGNLNQPKWGHLKQLHAAIKLGEKIITNGTRTDKDFGNEVTLTTYTH-TNG 372

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNT+ S DA + L
Sbjct: 373 ERFCFLSNTNDSKDANVDL 390

[Close]
BLAST of CSPI04G27750 vs. TAIR10
Match: AT1G31740.1 (AT1G31740.1 beta-galactosidase 15)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-10
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDE+GN NQPK  HLKQL+  +   +K LT G  S  D+G+ VT   +      
Sbjct: 330 YDYDAPLDEFGNLNQPKYGHLKQLHDVLHAMEKTLTYGNISTVDFGNLVTATVYQTEEGS 389

Query: 63  ERFCFLSNTDGSNDATI 80
              CF+ N + ++DA I
Sbjct: 390 S--CFIGNVNETSDAKI 404

[Close]
BLAST of CSPI04G27750 vs. TAIR10
Match: AT5G20710.1 (AT5G20710.1 beta-galactosidase 7)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 31/77 (40.26%), Postives = 43/77 (55.84%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY   LDE+GN NQPK  HLKQL+  +K  +K LT G  S  D G+S+    ++     
Sbjct: 313 YDYHAPLDEFGNLNQPKWGHLKQLHTVLKSMEKSLTYGNISRIDLGNSIKATIYTTKEGS 372

Query: 63  ERFCFLSNTDGSNDATI 80
              CF+ N + + DA +
Sbjct: 373 S--CFIGNVNATADALV 387

[Close]
BLAST of CSPI04G27750 vs. TAIR10
Match: AT2G04060.1 (AT2G04060.1 glycosyl hydrolase family 35 protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-08
Identity = 29/70 (41.43%), Postives = 37/70 (52.86%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDE+GN NQPK  HLKQL+      +K LT G  S  D+G+ V    +      
Sbjct: 43  YDYDAPLDEFGNLNQPKYGHLKQLHDVFHAMEKTLTYGNISTADFGNLVMTTVYQTEEGS 102

Query: 63  ERFCFLSNTD 73
              CF+ N +
Sbjct: 103 S--CFIGNVN 110

[Close]
BLAST of CSPI04G27750 vs. TAIR10
Match: AT2G28470.1 (AT2G28470.1 beta-galactosidase 8)

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-06
Identity = 29/77 (37.66%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  +DEYG   QPK  HL+ L+ +IKL +  L     +    GS++    +   S G
Sbjct: 317 YDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSNLEAAVYKTES-G 376

Query: 63  ERFCFLSNTDGSNDATI 80
               FL+N D  +DAT+
Sbjct: 377 SCAAFLANVDTKSDATV 392

[Close]
BLAST of CSPI04G27750 vs. TAIR10
Match: AT4G36360.1 (AT4G36360.1 beta-galactosidase 3)

HSP 1 Score: 47.0 bits (110), Expect = 6.6e-06
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  +DEYG   QPK  HLK+L+ +IK+ +K L +        G+      +S  S G
Sbjct: 318 YDYDAPIDEYGLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIGNKQQAHVYSAES-G 377

Query: 63  ERFCFLSNTDGSNDATI 80
           +   FL+N D  + A +
Sbjct: 378 DCSAFLANYDTESAARV 393

[Close]
BLAST of CSPI04G27750 vs. NCBI nr
Match: gi|659118476|ref|XP_008459141.1| (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 8.9e-29
Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYG+ NQPK  HLKQL+ASIKL +KILTNGTRSNQDYG SVTL KFSNPSTG
Sbjct: 311 YDYDAPLDEYGSLNQPKWGHLKQLHASIKLGEKILTNGTRSNQDYGGSVTLTKFSNPSTG 370

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNT+GSNDATI L
Sbjct: 371 ERFCFLSNTNGSNDATIDL 389

[Close]
BLAST of CSPI04G27750 vs. NCBI nr
Match: gi|659129875|ref|XP_008464891.1| (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-28
Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDYD  LDEYGN NQPK  HLKQL++SIKL +KILTNGT+SNQDYG+SVTL KFSNPSTG
Sbjct: 311 YDYDAPLDEYGNLNQPKWGHLKQLHSSIKLGEKILTNGTQSNQDYGASVTLTKFSNPSTG 370

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNT+GSNDATI L
Sbjct: 371 ERFCFLSNTNGSNDATIDL 389

[Close]
BLAST of CSPI04G27750 vs. NCBI nr
Match: gi|778665392|ref|XP_011648551.1| (PREDICTED: beta-galactosidase 15-like [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 2.8e-27
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTN TRSNQ++GSSVTL KFSNP+TG
Sbjct: 308 YDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNSTRSNQNFGSSVTLTKFSNPTTG 367

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG NDATI L
Sbjct: 368 ERFCFLSNTDGKNDATIDL 386

[Close]
BLAST of CSPI04G27750 vs. NCBI nr
Match: gi|659102456|ref|XP_008452141.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-27
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+ LLDEYGN NQPK  HLKQL+ASIKL +KILTNGTRS+Q++G+SVTL KF NP+TG
Sbjct: 308 YDYNALLDEYGNLNQPKWGHLKQLHASIKLGEKILTNGTRSDQNFGNSVTLTKFFNPTTG 367

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG NDATI L
Sbjct: 368 ERFCFLSNTDGKNDATIDL 386

[Close]
BLAST of CSPI04G27750 vs. NCBI nr
Match: gi|659074621|ref|XP_008437703.1| (PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 7.0e-26
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 1 

Query: 3   YDYDELLDEYGNSNQPKLRHLKQLYASIKLEDKILTNGTRSNQDYGSSVTLMKFSNPSTG 62
           YDY+  LDEYGN NQPK  HLKQL+ASIKL +KILTNGTRS+Q+ G SVTL KF NP+TG
Sbjct: 308 YDYNAPLDEYGNLNQPKWGHLKQLHASIKLGEKILTNGTRSDQNLGGSVTLTKFFNPTTG 367

Query: 63  ERFCFLSNTDGSNDATIGL 82
           ERFCFLSNTDG NDATI L
Sbjct: 368 ERFCFLSNTDGKNDATINL 386

The following BLAST results are available for this feature:
BLAST of CSPI04G27750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BGAL_BRAOL8.3e-1146.75Beta-galactosidase OS=Brassica oleracea PE=2 SV=1[more]
BGA13_ORYSJ1.9e-1043.04Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1[more]
BGA10_ORYSJ2.4e-1043.04Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 P... [more]
BGAL1_ORYSJ9.2e-1039.24Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1[more]
BGA14_ORYSJ1.2e-0940.51Beta-galactosidase 14 OS=Oryza sativa subsp. japonica GN=Os10g0340600 PE=2 SV=1[more]
BLAST of CSPI04G27750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M006_CUCSA2.0e-2779.75Beta-galactosidase OS=Cucumis sativus GN=Csa_1G650110 PE=3 SV=1[more]
A0A0A0KPJ0_CUCSA3.2e-2574.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G168840 PE=4 SV=1[more]
A0A0A0LXX7_CUCSA5.4e-2574.68Beta-galactosidase OS=Cucumis sativus GN=Csa_1G643050 PE=3 SV=1[more]
A0A0A0LYH4_CUCSA2.3e-2372.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569550 PE=4 SV=1[more]
I1MM62_SOYBN5.8e-1960.76Beta-galactosidase OS=Glycine max GN=GLYMA_16G083700 PE=3 SV=2[more]
BLAST of CSPI04G27750 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31740.11.5e-1042.86 beta-galactosidase 15[more]
AT5G20710.12.2e-0940.26 beta-galactosidase 7[more]
AT2G04060.13.1e-0841.43 glycosyl hydrolase family 35 protein[more]
AT2G28470.11.0e-0637.66 beta-galactosidase 8[more]
AT4G36360.16.6e-0636.36 beta-galactosidase 3[more]
BLAST of CSPI04G27750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118476|ref|XP_008459141.1|8.9e-2983.54PREDICTED: beta-galactosidase 15-like [Cucumis melo][more]
gi|659129875|ref|XP_008464891.1|1.2e-2882.28PREDICTED: beta-galactosidase-like [Cucumis melo][more]
gi|778665392|ref|XP_011648551.1|2.8e-2779.75PREDICTED: beta-galactosidase 15-like [Cucumis sativus][more]
gi|659102456|ref|XP_008452141.1|3.7e-2778.48PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo][more]
gi|659074621|ref|XP_008437703.1|7.0e-2677.22PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001944Glycoside_Hdrlase_35
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006012 galactose metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006027 glycosaminoglycan catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0009341 beta-galactosidase complex
molecular_function GO:0004565 beta-galactosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G27750.1CSPI04G27750.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 3..77
score: 4.7
NoneNo IPR availablePANTHERPTHR23421:SF80SUBFAMILY NOT NAMEDcoord: 3..77
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G27750CsaV3_5G013660Cucumber (Chinese Long) v3cpicucB235
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G27750Melon (DHL92) v3.6.1cpimedB261
CSPI04G27750Cucumber (Gy14) v2cgybcpiB223
CSPI04G27750Silver-seed gourdcarcpiB0204
CSPI04G27750Silver-seed gourdcarcpiB0701
CSPI04G27750Watermelon (97103) v2cpiwmbB335
CSPI04G27750Wax gourdcpiwgoB417
CSPI04G27750Cucumber (Gy14) v1cgycpiB347
CSPI04G27750Cucurbita maxima (Rimu)cmacpiB719
CSPI04G27750Cucurbita maxima (Rimu)cmacpiB720
CSPI04G27750Cucurbita pepo (Zucchini)cpecpiB404
CSPI04G27750Cucurbita moschata (Rifu)cmocpiB712
CSPI04G27750Cucurbita moschata (Rifu)cmocpiB713
CSPI04G27750Cucumber (Chinese Long) v2cpicuB180
CSPI04G27750Melon (DHL92) v3.5.1cpimeB265
CSPI04G27750Watermelon (Charleston Gray)cpiwcgB345
CSPI04G27750Cucurbita pepo (Zucchini)cpecpiB402
CSPI04G27750Bottle gourd (USVL1VR-Ls)cpilsiB294