CSPI04G23760 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCATCTACTTCAAAGCTGCTTGGTACCCTAAATTATTCTATGTTCAATCAACCAAGAACCGTGATTTCTCATCTCTATTTTCTTCGGCTTCAAAGTTGCATCCCTCCACTACAACAAATGGTTGAGGCAATACCCAAAACCGTTGTGGTTTCTCCTTGCTCGTCTTTCTCCCCGATCACGACGGTTTGCCTTCTTTGATACAAAGAGCATGCTCTGAACTTGAATTCATCGACCTCCATATTCCACCACGGTGGGTGGACGTCAACGACTTTAGATTTTCCAAGTTCAAATTCTCAGGGACTATTGTAGTATCGAAGATGCTTCATAAAGCTGTGGTTATCATGGACGAAGGCGTCGACGGTGATGAAGCTTAA ATGCCATCTACTTCAAAGCTGCTTGGCAATACCCAAAACCGTTGTGGTTTCTCCTTGCTCGTCTTTCTCCCCGATCACGACGGTTTGCCTTCTTTGATACAAAGAGCATGCTCTGAACTTGAATTCATCGACCTCCATATTCCACCACGGTGGGTGGACGTCAACGACTTTAGATTTTCCAAGTTCAAATTCTCAGGGACTATTGTAGTATCGAAGATGCTTCATAAAGCTGTGGTTATCATGGACGAAGGCGTCGACGGTGATGAAGCTTAA ATGCCATCTACTTCAAAGCTGCTTGGCAATACCCAAAACCGTTGTGGTTTCTCCTTGCTCGTCTTTCTCCCCGATCACGACGGTTTGCCTTCTTTGATACAAAGAGCATGCTCTGAACTTGAATTCATCGACCTCCATATTCCACCACGGTGGGTGGACGTCAACGACTTTAGATTTTCCAAGTTCAAATTCTCAGGGACTATTGTAGTATCGAAGATGCTTCATAAAGCTGTGGTTATCATGGACGAAGGCGTCGACGGTGATGAAGCTTAA
BLAST of CSPI04G23760 vs. Swiss-Prot
Match: SPZ1_ARATH (Serpin-Z1 OS=Arabidopsis thaliana GN=At1g64030 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 6.9e-06 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of CSPI04G23760 vs. Swiss-Prot
Match: SPZX_ARATH (Serpin-ZX OS=Arabidopsis thaliana GN=At1g47710 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 8.9e-06 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1
BLAST of CSPI04G23760 vs. TrEMBL
Match: A0A0A0L4S5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638460 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-45 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 1
BLAST of CSPI04G23760 vs. TrEMBL
Match: A0A166JBT6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004656 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-08 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CSPI04G23760 vs. TrEMBL
Match: A0A166JBL7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004652 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-08 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CSPI04G23760 vs. TrEMBL
Match: M5WL96_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025025mg PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.9e-08 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1
BLAST of CSPI04G23760 vs. TrEMBL
Match: A0A166JC06_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004662 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.7e-08 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CSPI04G23760 vs. TAIR10
Match: AT1G64030.1 (AT1G64030.1 serpin 3) HSP 1 Score: 51.2 bits (121), Expect = 3.9e-07 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of CSPI04G23760 vs. TAIR10
Match: AT1G47710.1 (AT1G47710.1 Serine protease inhibitor (SERPIN) family protein) HSP 1 Score: 50.8 bits (120), Expect = 5.0e-07 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1
BLAST of CSPI04G23760 vs. TAIR10
Match: AT3G45220.1 (AT3G45220.1 Serine protease inhibitor (SERPIN) family protein) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 23/59 (38.98%), Postives = 36/59 (61.02%), Query Frame = 1
BLAST of CSPI04G23760 vs. TAIR10
Match: AT1G64010.1 (AT1G64010.1 Serine protease inhibitor (SERPIN) family protein) HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06 Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 1
BLAST of CSPI04G23760 vs. TAIR10
Match: AT1G62160.1 (AT1G62160.1 Serine protease inhibitor (SERPIN) family protein) HSP 1 Score: 47.8 bits (112), Expect = 4.3e-06 Identity = 31/93 (33.33%), Postives = 44/93 (47.31%), Query Frame = 1
BLAST of CSPI04G23760 vs. NCBI nr
Match: gi|700199998|gb|KGN55156.1| (hypothetical protein Csa_4G638460 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 2.6e-45 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 1
BLAST of CSPI04G23760 vs. NCBI nr
Match: gi|659103135|ref|XP_008452492.1| (PREDICTED: serpin-ZX-like [Cucumis melo]) HSP 1 Score: 80.5 bits (197), Expect = 1.7e-12 Identity = 50/124 (40.32%), Postives = 64/124 (51.61%), Query Frame = 1
BLAST of CSPI04G23760 vs. NCBI nr
Match: gi|449446961|ref|XP_004141238.1| (PREDICTED: serpin-ZX-like [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 5.4e-11 Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 1
BLAST of CSPI04G23760 vs. NCBI nr
Match: gi|1021054222|gb|KZN12000.1| (hypothetical protein DCAR_004656 [Daucus carota subsp. sativus]) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-08 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CSPI04G23760 vs. NCBI nr
Match: gi|1021054218|gb|KZN11996.1| (hypothetical protein DCAR_004652 [Daucus carota subsp. sativus]) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-08 Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |