CSPI04G23110 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G23110
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Rab protein
Location	Chr4 : 21293647 .. 21295851 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCCAAGTCCTAAGTCCGTTACTAAGCCCAGAAGCAGTGGAAGGAAGGTTGAAGATGAACCAACCCACTTCACCATAACAACGTTGCCAAGTGATCGTCTTCAACAATTTCAAAACCTTTTGAGCTCCATTTTTTAAGACCCTTCGAATTTCAGTCATCGGATTCGACCTCAATAAGTATGGCAGCGTATAGAACTGACGACGATTACGATTATCTCTTTAAAGTTGTTCTCATCGGTGACTCGGGTGTGGGTAAATCCAATCTTCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCTAAATCCACAATCGGTGTTGAATTCGCCACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGACAAGAAAGGTTTGTCAATGAGTTGTTTTTTACTTCCATGATTCTGATGGACTCTGGCATTGTCTTGGTGTGGATCTTGATCACTTTTTTTTGTGTTTCTTTATTGAGATCTAATGTTATAATTTAAGATTTTTATGCTTTAACTTAATTGTTGGGAAAGTGGGGAGGGATTTATAGGGATTTTGGGTGTGTTCTTATGTTGTTGGGGATCTGAAATTAAGTAGCTTTCAGATATTGATTATCACGGATTGCTTGCTTGCTTCTTGCGACGATTATCGCGTTATTGTAACTTGGGTTTCTGGGATTATGTTTTTACTTTTTTAGATACCTTCACTCTCAAGAAATTTGATATGAATTTTGGAGTTGTGAATTTTGATCGATAATGGGATGTCACTATCGATTTTCACGTGGGACCTCATTTCCTAGAGTAGTCTGAATTCTCTCTTTAAAATAATAATCTGGATCTGATTAGAGAATAATGCTTGTTTGTGCCCAGACAAAATCTGAATTGTATTGTTATAGAAATTTTAAAAGTAGTGTTGGAAATTTCGGTTGAGTTTCTTCATGGATGTCATGCCAGCATTTTCTGTTAAATGGAATTGTTCTTCTTTCCTTTGGATTGTAGTGTGATTTTGGCTCTGTGCGTTTCCATCCTCGGTCAGCCTGTATTGATTTGTTTGTTTCCTCATCTTTTAGCAAGGTGGTTATATTTCCTATTACCATCATGCATCATGTTATTTTCGTATATACTTCCTGGATCATATTGAAATTAAAAAGAGCCTCGTTACATGTTTAACGCCATCATCTGAGGCTTGTTACCAAAATGTAGTATGCAAGGCTTGCCTTTTCTTTTAGTATGTGTGTGTAAATTGGCAATGTTGAAGCCTGGATGAGTAATACTGAAGACTTTAGAGTGTTGTAGAGATTTCATGATCCCTTAGTGAAATAGTTAGATCTCTTATACGCTTCTTTTTGCCAGATACCGTGCAATCACGAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACACGACACGTGACATTTGAAAATGTGGAGAGATGGCTGAAAGAGCTTAGGGATCATACTGATTCAAATATTGTGATAATGCTAGTTGGCAACAAGGCAGATTTGCGACATTTGCGTGCTGTATCAACTGAGGATGCCCAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACACAAATCTATCGTGTAGTTTGCAGAAAAGCACTTGAAATTGGAGAGGATCCTGCTGCGTTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAATGAAGAAAGTTGGTTGCTGCTCTTCATGATATCATCATTTTGAATATTAGGTACATCATCAAAAAGGAGTAAAAGGATGAGTTCATTATGATATGTCTTGAATTTCCACTCCTGGATTTGCTCAACAAACATTTACTTTATGGTCATTTTTTATGGTGATGGAGAGCTTCTCGGAGGGTTGGATTCATATTTGGAGTCTTTTGAAATTGACACCTCTTCTTATTGTCAAATTCCTTGTACTTTCTTGTCCAGGCTCACTCTCTTTTATTGTTTTAATTTTTGTAATGCCCCATAGTTTTAATTGTATCAGATTGTTCTAGATATAGAGAGATCTGTTAAACTGAAGTTGTATGTAGGTAAATGTTCAGTTGTTCAATGGGAGCAGATTTTTTTTAGTTTCTTCAATTTTGCATATTATGAGGTATTATGTT

mRNA sequence

ATGGCAGCGTATAGAACTGACGACGATTACGATTATCTCTTTAAAGTTGTTCTCATCGGTGACTCGGGTGTGGGTAAATCCAATCTTCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCTAAATCCACAATCGGTGTTGAATTCGCCACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGACAAGAAAGATACCGTGCAATCACGAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACACGACACGTGACATTTGAAAATGTGGAGAGATGGCTGAAAGAGCTTAGGGATCATACTGATTCAAATATTGTGATAATGCTAGTTGGCAACAAGGCAGATTTGCGACATTTGCGTGCTGTATCAACTGAGGATGCCCAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACACAAATCTATCGTGTAGTTTGCAGAAAAGCACTTGAAATTGGAGAGGATCCTGCTGCGTTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAATGAAGAAAGTTGGTTGCTGCTCTTCATGA

Coding sequence (CDS)

ATGGCAGCGTATAGAACTGACGACGATTACGATTATCTCTTTAAAGTTGTTCTCATCGGTGACTCGGGTGTGGGTAAATCCAATCTTCTCTCCAGGTTTACGCGTAATGAGTTCAGTCTTGAGTCTAAATCCACAATCGGTGTTGAATTCGCCACTCGGAGTATTCGGGTTGATGACAAGATCGTCAAGGCTCAGATTTGGGACACCGCTGGACAAGAAAGATACCGTGCAATCACGAGTGCATACTATCGAGGAGCTGTTGGTGCATTGCTTGTCTATGATGTCACACGACACGTGACATTTGAAAATGTGGAGAGATGGCTGAAAGAGCTTAGGGATCATACTGATTCAAATATTGTGATAATGCTAGTTGGCAACAAGGCAGATTTGCGACATTTGCGTGCTGTATCAACTGAGGATGCCCAGGCCTTTGCAGAGAAGGAGAACACATTCTTCATGGAGACATCTGCCCTTGAGTCTCTGAATGTCGAGAATGCTTTTACCGAAGTGCTAACACAAATCTATCGTGTAGTTTGCAGAAAAGCACTTGAAATTGGAGAGGATCCTGCTGCGTTGCCTAAAGGACAAACCATTAACGTTGGAAACAAGGATGATGTTTCTGCAATGAAGAAAGTTGGTTGCTGCTCTTCATGA

Homology

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BLAST of CSPI04G23110 vs. Swiss-Prot
Match: RAA1F_ARATH (Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 5.8e-112
Identity = 202/217 (93.09%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSA+KKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

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BLAST of CSPI04G23110 vs. Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 5.5e-110
Identity = 198/214 (92.52%), Postives = 211/214 (98.60%), Query Frame = 1


Query: 4   YRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVK 63
           YR +DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIRVDDKIVK
Sbjct: 5   YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVK 64

Query: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
           AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELRDHTD NIVIML
Sbjct: 65  AQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIML 124

Query: 124 VGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKAL 183
           VGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALESLNVENAFTEVLT+IY+VVCRKAL
Sbjct: 125 VGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKAL 184

Query: 184 EIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           E+G+DPAALPKGQTINVG KDDVSA+KKVGCCSS
Sbjct: 185 EVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217

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BLAST of CSPI04G23110 vs. Swiss-Prot
Match: RAA1G_ARATH (Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 1.5e-107
Identity = 194/217 (89.40%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS +KKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

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BLAST of CSPI04G23110 vs. Swiss-Prot
Match: RAA1I_ARATH (Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.2e-103
Identity = 186/218 (85.32%), Postives = 206/218 (94.50%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+A+AFAE+ENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SA+KK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

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BLAST of CSPI04G23110 vs. Swiss-Prot
Match: RAA1H_ARATH (Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.6e-101
Identity = 182/218 (83.49%), Postives = 203/218 (93.12%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ + FAE+ENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSA+KK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

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BLAST of CSPI04G23110 vs. TrEMBL
Match: A0A0A0L041_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628900 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.2e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

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BLAST of CSPI04G23110 vs. TrEMBL
Match: E5GBG0_CUCME (GTP-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.2e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

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BLAST of CSPI04G23110 vs. TrEMBL
Match: A0A068V7L3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016799001 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.1e-112
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVLTQIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE+GEDPAALPKGQTINVG KDDVSA+KKVGCCS+
Sbjct: 181 KALEVGEDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217

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BLAST of CSPI04G23110 vs. TrEMBL
Match: A0A061F8H8_THECC (RAB GTPase A1F OS=Theobroma cacao GN=TCM_031673 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.3e-112
Identity = 206/217 (94.93%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE+G+DPAALPKGQTINVG+KDDVSA+KKVGCCS+
Sbjct: 181 KALEVGDDPAALPKGQTINVGSKDDVSAIKKVGCCSA 217

[Close]

BLAST of CSPI04G23110 vs. TrEMBL
Match: W9S741_9ROSA (Ras-related protein RABA1f OS=Morus notabilis GN=L484_015029 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-111
Identity = 204/217 (94.01%), Postives = 214/217 (98.62%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+VDDK
Sbjct: 1   MGAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIKVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA++FAEKENTFFMETSALES+NVEN+FTEVLTQIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKSFAEKENTFFMETSALESMNVENSFTEVLTQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IGEDPAALPKGQTINVG KDDVSA+KKVGCCS+
Sbjct: 181 KALDIGEDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217

[Close]

BLAST of CSPI04G23110 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 404.8 bits (1039), Expect = 3.3e-113
Identity = 202/217 (93.09%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDK
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IM VGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSA+KKVGCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CSPI04G23110 vs. TAIR10
Match: AT3G15060.1 (AT3G15060.1 RAB GTPase homolog A1G)

HSP 1 Score: 390.2 bits (1001), Expect = 8.4e-109
Identity = 194/217 (89.40%), Postives = 209/217 (96.31%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD+K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALE+LNVENAFTEVL+QIYRV  +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IG+D   LPKGQ+INVG+KDDVS +KKVGCCSS
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of CSPI04G23110 vs. TAIR10
Match: AT1G28550.1 (AT1G28550.1 RAB GTPase homolog A1I)

HSP 1 Score: 376.3 bits (965), Expect = 1.3e-104
Identity = 186/218 (85.32%), Postives = 206/218 (94.50%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+ DDK
Sbjct: 1   MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRA+STE+A+AFAE+ENTFFMETSALE++NV+NAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE G+DP  ALPKGQ INVG +DD+SA+KK GCCS+
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCSA 218

[Close]

BLAST of CSPI04G23110 vs. TAIR10
Match: AT2G33870.1 (AT2G33870.1 RAB GTPase homolog A1H)

HSP 1 Score: 369.0 bits (946), Expect = 2.0e-102
Identity = 182/218 (83.49%), Postives = 203/218 (93.12%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M  Y+ +DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+VDDK
Sbjct: 1   MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADL HLRA+STE+ + FAE+ENTFFMETSALE++NVENAFTEVLTQIYRVV +
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180

Query: 181 KALEIGEDP-AALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+ G+DP  ALPKGQ INVG++DDVSA+KK GCC++
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218

[Close]

BLAST of CSPI04G23110 vs. TAIR10
Match: AT4G18430.1 (AT4G18430.1 RAB GTPase homolog A1E)

HSP 1 Score: 367.9 bits (943), Expect = 4.5e-102
Identity = 177/216 (81.94%), Postives = 201/216 (93.06%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR DDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ VD+K
Sbjct: 1   MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELRDHTD+N+V
Sbjct: 61  IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAV TE+A++F+E+EN FFMETSAL++ NVE AFT VLTQIYRV+ R
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCS 217
           KAL+   DP +LPKGQTI++GNKDDV+A+K  GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216

[Close]

BLAST of CSPI04G23110 vs. NCBI nr
Match: gi|449456603|ref|XP_004146038.1| (PREDICTED: ras-related protein RABA1f [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 6.0e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217

[Close]

BLAST of CSPI04G23110 vs. NCBI nr
Match: gi|729326138|ref|XP_010535057.1| (PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana])

HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-112
Identity = 207/217 (95.39%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IG+DPAALPKGQTINVG+KDDVSA+KKVGCCSS
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAIKKVGCCSS 217

[Close]

BLAST of CSPI04G23110 vs. NCBI nr
Match: gi|661880362|emb|CDP15893.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-112
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           M AYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           +VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVLTQIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE+GEDPAALPKGQTINVG KDDVSA+KKVGCCS+
Sbjct: 181 KALEVGEDPAALPKGQTINVGTKDDVSAVKKVGCCSA 217

[Close]

BLAST of CSPI04G23110 vs. NCBI nr
Match: gi|590609749|ref|XP_007021623.1| (RAB GTPase A1F [Theobroma cacao])

HSP 1 Score: 411.8 bits (1057), Expect = 7.6e-112
Identity = 206/217 (94.93%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVENAFTEVL+QIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KALE+G+DPAALPKGQTINVG+KDDVSA+KKVGCCS+
Sbjct: 181 KALEVGDDPAALPKGQTINVGSKDDVSAIKKVGCCSA 217

[Close]

BLAST of CSPI04G23110 vs. NCBI nr
Match: gi|729347557|ref|XP_010542304.1| (PREDICTED: ras-related protein RABA1f-like [Tarenaya hassleriana])

HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111
Identity = 206/217 (94.93%), Postives = 215/217 (99.08%), Query Frame = 1


Query: 1   MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
           MAAYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK
Sbjct: 1   MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60

Query: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
           IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
           IMLVGNKADLRHLRAVSTEDA+AFAE+ENTFFMETSALES+NVEN+FTEVL+QIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENSFTEVLSQIYRVVSR 180

Query: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 218
           KAL+IGEDPAALPKGQTINVG+KDDVSA+KKVGCCSS
Sbjct: 181 KALDIGEDPAALPKGQTINVGSKDDVSAVKKVGCCSS 217

The following BLAST results are available for this feature:

BLAST of CSPI04G23110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA1F_ARATH	5.8e-112	93.09	Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2 SV=1	[more]
RB11B_TOBAC	5.5e-110	92.52	Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1	[more]
RAA1G_ARATH	1.5e-107	89.40	Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2 SV=1	[more]
RAA1I_ARATH	2.2e-103	85.32	Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2 SV=1	[more]
RAA1H_ARATH	3.6e-101	83.49	Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2 SV=1	[more]

BLAST of CSPI04G23110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L041_CUCSA	4.2e-117	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G628900 PE=4 SV=1	[more]
E5GBG0_CUCME	4.2e-117	100.00	GTP-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A068V7L3_COFCA	4.1e-112	94.93	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016799001 PE=4 SV=1	[more]
A0A061F8H8_THECC	5.3e-112	94.93	RAB GTPase A1F OS=Theobroma cacao GN=TCM_031673 PE=4 SV=1	[more]
W9S741_9ROSA	2.0e-111	94.01	Ras-related protein RABA1f OS=Morus notabilis GN=L484_015029 PE=4 SV=1	[more]

BLAST of CSPI04G23110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60860.1	3.3e-113	93.09	RAB GTPase homolog A1F	[more]
AT3G15060.1	8.4e-109	89.40	RAB GTPase homolog A1G	[more]
AT1G28550.1	1.3e-104	85.32	RAB GTPase homolog A1I	[more]
AT2G33870.1	2.0e-102	83.49	RAB GTPase homolog A1H	[more]
AT4G18430.1	4.5e-102	81.94	RAB GTPase homolog A1E	[more]

BLAST of CSPI04G23110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456603\|ref\|XP_004146038.1\|	6.0e-117	100.00	PREDICTED: ras-related protein RABA1f [Cucumis sativus]	[more]
gi\|729326138\|ref\|XP_010535057.1\|	5.9e-112	95.39	PREDICTED: ras-related protein RABA1f [Tarenaya hassleriana]	[more]
gi\|661880362\|emb\|CDP15893.1\|	5.9e-112	94.93	unnamed protein product [Coffea canephora]	[more]
gi\|590609749\|ref\|XP_007021623.1\|	7.6e-112	94.93	RAB GTPase A1F [Theobroma cacao]	[more]
gi\|729347557\|ref\|XP_010542304.1\|	1.3e-111	94.93	PREDICTED: ras-related protein RABA1f-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G23110.1	CSPI04G23110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 7.2
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 5.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..215 score: 1.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180 score: 1.02
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 14..35 score: 1.5E-42coord: 152..174 score: 1.5E-42coord: 55..77 score: 1.5E-42coord: 117..130 score: 1.5E-42coord: 37..53 score: 1.5
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..217 score: 1.5E
None	No IPR available	PANTHER	PTHR24073:SF553	RAS-RELATED PROTEIN RABA1G	coord: 4..217 score: 1.5E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 3.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..173 score: 1.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 3.9E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..216 score: 1.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..215 score: 36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G23110	Cla023349	Watermelon (97103) v1	cpiwmB356
CSPI04G23110	Csa4G628900	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G23110	MELO3C025622	Melon (DHL92) v3.5.1	cpimeB293
CSPI04G23110	ClCG11G017710	Watermelon (Charleston Gray)	cpiwcgB289
CSPI04G23110	Lsi04G020360	Bottle gourd (USVL1VR-Ls)	cpilsiB283
CSPI04G23110	MELO3C025622.2	Melon (DHL92) v3.6.1	cpimedB287
CSPI04G23110	CsaV3_4G033340	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G23110	Cla97C11G223740	Watermelon (97103) v2	cpiwmbB286
CSPI04G23110	Bhi09G002844	Wax gourd	cpiwgoB421
CSPI04G23110	Cucsa.122800	Cucumber (Gy14) v1	cgycpiB164
CSPI04G23110	CmaCh01G012320	Cucurbita maxima (Rimu)	cmacpiB477
CSPI04G23110	CmaCh09G008330	Cucurbita maxima (Rimu)	cmacpiB021
CSPI04G23110	CmoCh09G008270	Cucurbita moschata (Rifu)	cmocpiB012
CSPI04G23110	CmoCh01G012850	Cucurbita moschata (Rifu)	cmocpiB466
CSPI04G23110	Cp4.1LG06g06590	Cucurbita pepo (Zucchini)	cpecpiB785
CSPI04G23110	Cp4.1LG02g01930	Cucurbita pepo (Zucchini)	cpecpiB567
CSPI04G23110	CsGy4G021510	Cucumber (Gy14) v2	cgybcpiB169
CSPI04G23110	Carg14717	Silver-seed gourd	carcpiB0345
CSPI04G23110	Carg17070	Silver-seed gourd	carcpiB0194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G23110	Watermelon (97103) v2	cpiwmbB338
CSPI04G23110	Wild cucumber (PI 183967)	cpicpiB026
CSPI04G23110	Wild cucumber (PI 183967)	cpicpiB149
CSPI04G23110	Cucumber (Gy14) v1	cgycpiB412
CSPI04G23110	Cucurbita maxima (Rimu)	cmacpiB027
CSPI04G23110	Cucurbita maxima (Rimu)	cmacpiB345
CSPI04G23110	Cucumber (Chinese Long) v2	cpicuB171
CSPI04G23110	Cucumber (Chinese Long) v2	cpicuB186
CSPI04G23110	Watermelon (Charleston Gray)	cpiwcgB348
CSPI04G23110	Cucurbita pepo (Zucchini)	cpecpiB791
CSPI04G23110	Bottle gourd (USVL1VR-Ls)	cpilsiB307
CSPI04G23110	Cucumber (Gy14) v2	cgybcpiB174
CSPI04G23110	Silver-seed gourd	carcpiB0196
CSPI04G23110	Silver-seed gourd	carcpiB0688
CSPI04G23110	Cucumber (Chinese Long) v3	cpicucB220