CSPI04G22270 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G22270
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 20636393 .. 20636578 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCT

mRNA sequence

ATGAAAGGCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCT

Coding sequence (CDS)

ATGAAAGGCCATCGTGTAGAAGCACTCTGTTTTGTTATGGGCAAAACCAAAATCAGTAGCGGTGAGCGGGACACAAATGGTGCGACGACGGACCAGACAAAGCTTGCGAAATCGGTATCTGACAAATCTTCCATTTCATATCCATTGATGACGATGATTCCACCTCCTCCTCTATCCCATTTCTCT
Homology
[Close]
BLAST of CSPI04G22270 vs. TrEMBL
Match: A0A0A0L360_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621190 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 1 

Query: 1  MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKSVSD 42
          MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKS+ D
Sbjct: 1  MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKSLID 41

[Close]
BLAST of CSPI04G22270 vs. NCBI nr
Match: gi|700199849|gb|KGN55007.1| (hypothetical protein Csa_4G621190 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 1 

Query: 1  MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKSVSD 42
          MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKS+ D
Sbjct: 1  MKGHRVEALCFVMGKTKISSGERDTNGATTDQTKLAKSLID 41

The following BLAST results are available for this feature:
BLAST of CSPI04G22270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G22270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L360_CUCSA1.0e-1295.12Uncharacterized protein OS=Cucumis sativus GN=Csa_4G621190 PE=4 SV=1[more]
BLAST of CSPI04G22270 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G22270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199849|gb|KGN55007.1|1.5e-1295.12hypothetical protein Csa_4G621190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G22270.1CSPI04G22270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G22270CsaV3_4G032630Cucumber (Chinese Long) v3cpicucB212
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G22270Watermelon (97103) v2cpiwmbB286
CSPI04G22270Wax gourdcpiwgoB421
CSPI04G22270Cucumber (Gy14) v1cgycpiB043
CSPI04G22270Cucurbita maxima (Rimu)cmacpiB024
CSPI04G22270Cucurbita maxima (Rimu)cmacpiB477
CSPI04G22270Cucurbita moschata (Rifu)cmocpiB015
CSPI04G22270Cucurbita moschata (Rifu)cmocpiB466
CSPI04G22270Cucumber (Chinese Long) v2cpicuB181
CSPI04G22270Melon (DHL92) v3.5.1cpimeB316
CSPI04G22270Watermelon (Charleston Gray)cpiwcgB289
CSPI04G22270Watermelon (97103) v1cpiwmB356
CSPI04G22270Cucurbita pepo (Zucchini)cpecpiB567
CSPI04G22270Cucurbita pepo (Zucchini)cpecpiB788
CSPI04G22270Bottle gourd (USVL1VR-Ls)cpilsiB283
CSPI04G22270Bottle gourd (USVL1VR-Ls)cpilsiB290
CSPI04G22270Melon (DHL92) v3.6.1cpimedB308
CSPI04G22270Cucumber (Gy14) v2cgybcpiB169
CSPI04G22270Silver-seed gourdcarcpiB0345
CSPI04G22270Silver-seed gourdcarcpiB0667
CSPI04G22270Cucumber (Chinese Long) v3cpicucB217