CSPI04G21990 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G21990
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 20458977 .. 20459207 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACGCGATCGGCTGGGCAAGGGAAAGCGGCTCGGGCGGAAGAGGCGTACGGCTGGCTTAGATGGAAGGGGCTCGACTCACAGCTAGGGGAGCTGAAGGCGCGACTCAAGGTCGGCGGAAGGGCGTGCGGCTCACGGCTCGGATGGAAGGGCGTGGCTCACATCTCAAGCCCAAGGGGCACGCGGCTCGCAAGCGGCAGAAGGACGTGCGGTTTACGGCTCGATTGA

mRNA sequence

ATGAAGACGCGATCGGCTGGGCAAGGGAAAGCGGCTCGGGCGGAAGAGGCGTACGGCTGGCTTAGATGGAAGGGGCTCGACTCACAGCTAGGGGAGCTGAAGGCGCGACTCAAGGTCGGCGGAAGGGCGTGCGGCTCACGGCTCGGATGGAAGGGCGTGGCTCACATCTCAAGCCCAAGGGGCACGCGGCTCGCAAGCGGCAGAAGGACGTGCGGTTTACGGCTCGATTGA

Coding sequence (CDS)

ATGAAGACGCGATCGGCTGGGCAAGGGAAAGCGGCTCGGGCGGAAGAGGCGTACGGCTGGCTTAGATGGAAGGGGCTCGACTCACAGCTAGGGGAGCTGAAGGCGCGACTCAAGGTCGGCGGAAGGGCGTGCGGCTCACGGCTCGGATGGAAGGGCGTGGCTCACATCTCAAGCCCAAGGGGCACGCGGCTCGCAAGCGGCAGAAGGACGTGCGGTTTACGGCTCGATTGA
Homology
[Close]
BLAST of CSPI04G21990 vs. TrEMBL
Match: A0A0A0L1R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618440 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.0e-14
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 1 

Query: 24 KGLDSQLGELKARLKVGGRACGSRLGWKGVAHISSPRGTRLASGRRT 71
          +G    LGELKARLKVGGRACGSRLGWKGVAHISSPR TRLASGRRT
Sbjct: 2  EGARLMLGELKARLKVGGRACGSRLGWKGVAHISSPRDTRLASGRRT 48

[Close]
BLAST of CSPI04G21990 vs. NCBI nr
Match: gi|700199821|gb|KGN54979.1| (hypothetical protein Csa_4G618440 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 1 

Query: 24 KGLDSQLGELKARLKVGGRACGSRLGWKGVAHISSPRGTRLASGRRT 71
          +G    LGELKARLKVGGRACGSRLGWKGVAHISSPR TRLASGRRT
Sbjct: 2  EGARLMLGELKARLKVGGRACGSRLGWKGVAHISSPRDTRLASGRRT 48

The following BLAST results are available for this feature:
BLAST of CSPI04G21990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G21990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1R5_CUCSA9.0e-1487.23Uncharacterized protein OS=Cucumis sativus GN=Csa_4G618440 PE=4 SV=1[more]
BLAST of CSPI04G21990 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G21990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199821|gb|KGN54979.1|1.3e-1387.23hypothetical protein Csa_4G618440 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G21990.1CSPI04G21990.1mRNA