CSPI04G20960 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G20960
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Gag protease polyprotein
Location	Chr4 : 19383552 .. 19384852 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAATATGGTCATTCGTCACTTGCCAGGTACGTTTTATGATATAAGTTTTTGATTCTGTATATATGACATTGCCTGAATTAAACTAGATAAGTAAGTATGTTATGATTGAATTTGTTGTAAAGAACTTTTGGTGGTGGAATTTAGGAAACATGTCACTATGCAGAAGTGTGTTCGTAGAGGTGGTAGGAGAGGCAGAGAAGTTATACGTAACCAGCCTAAAGGACAACATGCTATACAAGTTGTCGACCCTACTGCATATGTTACGCAAGCAGACCTTGCTGCCATGGAGCAAAGGTACATAGACTTGTTGTTCGAAGCATTGGCACAACAACAGCCTGTCCAGCAGACCCAGATAGCTCTTGTTCAAACACCAGCTACAGATGTTCAGATCCCAGCTGCAAGAGTTCAGGCCCCAATTGTAACCCAGAACCTACCTGATATGCTTTCAGCAGAAGCCAAACACCTGAAGGATTTCAGAAAGTATAACCCTCGAACTTTTGATGGATCCTTGGCAGACCCCAGCAAGGCACATATGTGGTTGAGTTCGGTGGAGACTATCTTTTGCTACATGAAGTGCTCCAACGACCAGAAAGTTCAGTGCGTCATTTGCTTACTGACAGATAGGGGCAGAGGCTGGTGGAAGTCCGCAGAGAGGATGTTGGGTGGAGATATGAGTCAAATCACCTGGGAGCAATTTAAGGAGAATTTTTCTGCCAAATTCTTCTCCGCCACAGTGAGAGATGCCAAGTGCCAGGAGTTTCTAAAGCTGGAGCAAGACAATATGATCGTTGAGGAGTACGATTAGGAATTCGACGCGTTATCCTGATTTGCACCTAAGCTAGTAAGAACTGAGGCTGAGAGAGTCGACAAGTTTGTCAGTTAAGTTAGAGATCCAAGATTTCGTTCGAGTCCTTAGACCAGCTACAAAGGCTGATGCACTACGCATGACAATGAATTTGAGTTTGCATGAGAGGTCGGAGTTGGCCAATGCTACAGAGAAGGGATCAACTACAGGACAAAAGAGGAAGGCTGAGCAGCATCCTGCTAACATTACCTTTAGAGATTCAAGTTCAAGTGGCACCTTCCGTCATCACCAACAGGAGGTCATTAAAACAGAAGGGTACCACGGGGGGGTTGCCTACTTGTAGTACCATTGGAAAACATCATTCAGGTCGTTGCATGTCAAATAAGAGGGTTTGTTTTAAATGCAGCCAAGAAGGGCACTTAGCTAACCATTTCCCTCAAGGTGTTGTTGCCACTAATCGGCAGGGGGGCGAGAAGCCTGCACATAAATGA

mRNA sequence

ATGGTTAATATGGTCATTCGTCACTTGCCAGAACTTTTGGTGGTGGAATTTAGGAAACATGTCACTATGCAGAAGTGTGTTCGTAGAGGTGGTAGGAGAGGCAGAGAAGTTATACGTAACCAGCCTAAAGGACAACATGCTATACAAGTTGTCGACCCTACTGCATATGTTACGCAAGCAGACCTTGCTGCCATGGAGCAAAGGTACATAGACTTGTTGTTCGAAGCATTGGCACAACAACAGCCTGTCCAGCAGACCCAGATAGCTCTTGTTCAAACACCAGCTACAGATGTTCAGATCCCAGCTGCAAGAGTTCAGGCCCCAATTGTAACCCAGAACCTACCTGATATGCTTTCAGCAGAAGCCAAACACCTGAAGGATTTCAGAAAGTATAACCCTCGAACTTTTGATGGATCCTTGGCAGACCCCAGCAAGGCACATATGTGGTTGAGTTCGGTGGAGACTATCTTTTGCTACATGAAGTGCTCCAACGACCAGAAAGTTCAGTGCGTCATTTGCTTACTGACAGATAGGGGCAGAGGCTGGTGGAAGTCCGCAGAGAGGATGTTGGGTGGAGATATGAGTCAAATCACCTGGGAGCAATTTAAGGAGAATTTTTCTGCCAAATTCTTCTCCGCCACAGTGAGAGATGCCAAGTGCCAGGAGTTTCTAAAGCTGGAGCAAGACAATATGATCGTTGAGGAACCAGCTACAAAGGCTGATGCACTACGCATGACAATGAATTTGAGTTTGCATGAGAGGTCGGAGTTGGCCAATGCTACAGAGAAGGGATCAACTACAGGACAAAAGAGGAAGGCTGAGCAGCATCCTGCTAACATTACCTTTAGAGATTCAAGTTCAAGTGGCACCTTCCGTCATCACCAACAGGAGGTCATTAAAACAGAAGGCCAAGAAGGGCACTTAGCTAACCATTTCCCTCAAGGTGTTGTTGCCACTAATCGGCAGGGGGGCGAGAAGCCTGCACATAAATGA

Coding sequence (CDS)

ATGGTTAATATGGTCATTCGTCACTTGCCAGAACTTTTGGTGGTGGAATTTAGGAAACATGTCACTATGCAGAAGTGTGTTCGTAGAGGTGGTAGGAGAGGCAGAGAAGTTATACGTAACCAGCCTAAAGGACAACATGCTATACAAGTTGTCGACCCTACTGCATATGTTACGCAAGCAGACCTTGCTGCCATGGAGCAAAGGTACATAGACTTGTTGTTCGAAGCATTGGCACAACAACAGCCTGTCCAGCAGACCCAGATAGCTCTTGTTCAAACACCAGCTACAGATGTTCAGATCCCAGCTGCAAGAGTTCAGGCCCCAATTGTAACCCAGAACCTACCTGATATGCTTTCAGCAGAAGCCAAACACCTGAAGGATTTCAGAAAGTATAACCCTCGAACTTTTGATGGATCCTTGGCAGACCCCAGCAAGGCACATATGTGGTTGAGTTCGGTGGAGACTATCTTTTGCTACATGAAGTGCTCCAACGACCAGAAAGTTCAGTGCGTCATTTGCTTACTGACAGATAGGGGCAGAGGCTGGTGGAAGTCCGCAGAGAGGATGTTGGGTGGAGATATGAGTCAAATCACCTGGGAGCAATTTAAGGAGAATTTTTCTGCCAAATTCTTCTCCGCCACAGTGAGAGATGCCAAGTGCCAGGAGTTTCTAAAGCTGGAGCAAGACAATATGATCGTTGAGGAACCAGCTACAAAGGCTGATGCACTACGCATGACAATGAATTTGAGTTTGCATGAGAGGTCGGAGTTGGCCAATGCTACAGAGAAGGGATCAACTACAGGACAAAAGAGGAAGGCTGAGCAGCATCCTGCTAACATTACCTTTAGAGATTCAAGTTCAAGTGGCACCTTCCGTCATCACCAACAGGAGGTCATTAAAACAGAAGGCCAAGAAGGGCACTTAGCTAACCATTTCCCTCAAGGTGTTGTTGCCACTAATCGGCAGGGGGGCGAGAAGCCTGCACATAAATGA

Homology

[Close]

BLAST of CSPI04G20960 vs. TrEMBL
Match: E5GBB7_CUCME (Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-61
Identity = 135/238 (56.72%), Postives = 165/238 (69.33%), Query Frame = 1


Query: 9   LPELLVVEFRKHVTMQKCVRRGGR--RGREVIRNQPKGQHAIQVVDPTAYVTQADLAAME 68
           +PE LVV   + +  ++  RRGGR  RGR   R QP+ Q   Q  DP A VT ADLAAME
Sbjct: 221 VPESLVVV--REMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAME 280

Query: 69  QRYIDLLFEALAQQQPVQQTQIALVQTPATDVQIPA-ARVQAPIVTQNLPDMLSAEAKHL 128
           QR+ D++ +   QQ+P   T       PA    +PA A    P+  Q +PD LSAEAKHL
Sbjct: 281 QRFRDMIMQMREQQKPASPTP---APAPAP---VPAPAPAPVPVAPQFVPDQLSAEAKHL 340

Query: 129 KDFRKYNPRTFDGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKS 188
           +DFRKYNP TFDGSL DP++A MWLSS+ETIF YMKC  DQKVQC + +LTDRG  WW++
Sbjct: 341 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 400

Query: 189 AERMLGGDMSQITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
            ERMLGGD+SQITW+QFKE+F AKFFSA++RDAK QEFL LEQ +M VE+   + D L
Sbjct: 401 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDML 450

[Close]

BLAST of CSPI04G20960 vs. TrEMBL
Match: Q84KB1_CUCME (Gag-protease polyprotein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.7e-51
Identity = 105/179 (58.66%), Postives = 128/179 (71.51%), Query Frame = 1


Query: 65  MEQRYIDLLFEALAQQQPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKH 124
           MEQR+ D++ +   QQ+P   T           V  PA     P+  Q +PD LSAEAKH
Sbjct: 1   MEQRFRDMIMQMPEQQKPASPTPAPAPAPAPAPVPAPAP-APVPVAPQFVPDQLSAEAKH 60

Query: 125 LKDFRKYNPRTFDGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWK 184
           L+DFRKYNP TFDGSL DP++A MWLSS+ETIF YMKC  DQKVQC + +LTDRG  WW+
Sbjct: 61  LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 120

Query: 185 SAERMLGGDMSQITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
           + ERMLGGD+SQITW+QFKE+F AKFFSA++RDAK QEFL LEQ +M VE+   + D L
Sbjct: 121 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDML 178

[Close]

BLAST of CSPI04G20960 vs. TrEMBL
Match: E5GB72_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 110/225 (48.89%), Postives = 144/225 (64.00%), Query Frame = 1


Query: 21  VTMQKCVRRGGRRGREVIRNQPKGQHAIQVVDPTAYVTQADLAAMEQRYIDLLFEALAQQ 80
           +T ++  RRG + GR V  NQP    A QV +P A +T ADL  +EQR+ D + E LA+ 
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQP----AEQVANPVAPITHADLTQLEQRFNDTVTEVLARH 60

Query: 81  QPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKHLKDFRKYNPRTFDGSL 140
           Q  Q                 AA  Q     Q+LPD LS EAKHL+DFR Y+P+TF+GSL
Sbjct: 61  QLAQ-----------------AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSL 120

Query: 141 ADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKSAERMLGGDMSQITWE 200
            DP    +WLSSVETIF +M+C +DQKVQC + LL +R   WW+S ERMLGG+++QITW+
Sbjct: 121 EDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWD 180

Query: 201 QFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADALRM 246
           QFKE+F AKF  +++RDAK QEF+ L+Q  M VEE   + D L +
Sbjct: 181 QFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSL 204

[Close]

BLAST of CSPI04G20960 vs. TrEMBL
Match: E5GCE2_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 81/185 (43.78%), Postives = 106/185 (57.30%), Query Frame = 1


Query: 145 KAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKSAERMLGGDMSQITWEQFKE 204
           + HM  S +  ++    C  DQKVQC I +LTDRG  WW++ ERMLGGD+ QITWEQFKE
Sbjct: 104 EGHMDASGL--LYASANCPEDQKVQCAIFMLTDRGTAWWETTERMLGGDVGQITWEQFKE 163

Query: 205 NFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL-RMTMNL---------SLHER 264
           +F AKFFSA++RDAK QEFL LEQD+  VE+   + D L R  + +         +L ER
Sbjct: 164 SFYAKFFSASLRDAKWQEFLNLEQDDRTVEQYDVEFDILSRFALEMIAIEAARADNLQER 223

Query: 265 SELANATEKGSTTGQKRKAEQHP--ANITFRDSSSSGTFRHHQQEVIKTEGQEGHLANHF 318
           +  +    +GST+GQKRKAEQ P        +    G    HQ +V  T   E   A+  
Sbjct: 224 ANSSKVAGRGSTSGQKRKAEQQPILRQGKLPEGIRCGAGAPHQGKVFATNKTEAERASTV 283

[Close]

BLAST of CSPI04G20960 vs. TrEMBL
Match: A0A151RCI2_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_038364 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 1


Query: 125 LKDFRKYNPRTFDGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWK 184
           L +FR+  P  FDG   +P KA +W+  +E IF  M C +DQKV   + +L      WW 
Sbjct: 2   LVEFRRNKPSHFDGGY-NPEKAELWIKEIEKIFRAMNCPDDQKVNYAVFILVGEAEYWWD 61

Query: 185 SAERMLGGDMSQITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
           S  R+L G    ITWE F+  F  K+F   V+ AK  EF++L+Q NMIV E A+K + L
Sbjct: 62  STRRLLEGGGIIITWEVFRAKFFEKYFPNDVKRAKEIEFMQLKQGNMIVGEYASKFEKL 119

[Close]

BLAST of CSPI04G20960 vs. NCBI nr
Match: gi|307135903|gb|ADN33767.1| (gag protease polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 244.2 bits (622), Expect = 3.2e-61
Identity = 135/238 (56.72%), Postives = 165/238 (69.33%), Query Frame = 1


Query: 9   LPELLVVEFRKHVTMQKCVRRGGR--RGREVIRNQPKGQHAIQVVDPTAYVTQADLAAME 68
           +PE LVV   + +  ++  RRGGR  RGR   R QP+ Q   Q  DP A VT ADLAAME
Sbjct: 221 VPESLVVV--REMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAME 280

Query: 69  QRYIDLLFEALAQQQPVQQTQIALVQTPATDVQIPA-ARVQAPIVTQNLPDMLSAEAKHL 128
           QR+ D++ +   QQ+P   T       PA    +PA A    P+  Q +PD LSAEAKHL
Sbjct: 281 QRFRDMIMQMREQQKPASPTP---APAPAP---VPAPAPAPVPVAPQFVPDQLSAEAKHL 340

Query: 129 KDFRKYNPRTFDGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKS 188
           +DFRKYNP TFDGSL DP++A MWLSS+ETIF YMKC  DQKVQC + +LTDRG  WW++
Sbjct: 341 RDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWET 400

Query: 189 AERMLGGDMSQITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
            ERMLGGD+SQITW+QFKE+F AKFFSA++RDAK QEFL LEQ +M VE+   + D L
Sbjct: 401 TERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDML 450

[Close]

BLAST of CSPI04G20960 vs. NCBI nr
Match: gi|778708157|ref|XP_011656132.1| (PREDICTED: uncharacterized protein LOC105435631 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 8.2e-57
Identity = 118/167 (70.66%), Postives = 131/167 (78.44%), Query Frame = 1


Query: 77  LAQQQPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKHLKDFRKYNPRTF 136
           +AQ+Q   QTQIA VQ P   VQIPA  VQ P+V Q+L DM SAEA HL+DFRKYNPRTF
Sbjct: 1   MAQRQLAPQTQIAYVQAPTAGVQIPAIGVQTPVVAQHLLDMHSAEANHLRDFRKYNPRTF 60

Query: 137 DGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKSAERMLGGDMSQ 196
            GSLADP+KA MWLS VETIF YMKC NDQKVQC + LL D GRG W+S ERMLGGD+S+
Sbjct: 61  YGSLADPTKAQMWLSLVETIFRYMKCPNDQKVQCTVYLLIDWGRGLWESIERMLGGDISK 120

Query: 197 ITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
           ITWEQFKE F AK FSATVR+AKC +FLKLEQ NM VEE   + DAL
Sbjct: 121 ITWEQFKEIFYAKIFSATVREAKCHDFLKLEQGNMTVEEYDQEFDAL 167

[Close]

BLAST of CSPI04G20960 vs. NCBI nr
Match: gi|28558780|gb|AAO45751.1| (gag-protease polyprotein [Cucumis melo subsp. melo])

HSP 1 Score: 209.9 bits (533), Expect = 6.7e-51
Identity = 105/179 (58.66%), Postives = 128/179 (71.51%), Query Frame = 1


Query: 65  MEQRYIDLLFEALAQQQPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKH 124
           MEQR+ D++ +   QQ+P   T           V  PA     P+  Q +PD LSAEAKH
Sbjct: 1   MEQRFRDMIMQMPEQQKPASPTPAPAPAPAPAPVPAPAP-APVPVAPQFVPDQLSAEAKH 60

Query: 125 LKDFRKYNPRTFDGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWK 184
           L+DFRKYNP TFDGSL DP++A MWLSS+ETIF YMKC  DQKVQC + +LTDRG  WW+
Sbjct: 61  LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 120

Query: 185 SAERMLGGDMSQITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADAL 244
           + ERMLGGD+SQITW+QFKE+F AKFFSA++RDAK QEFL LEQ +M VE+   + D L
Sbjct: 121 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDML 178

[Close]

BLAST of CSPI04G20960 vs. NCBI nr
Match: gi|659114199|ref|XP_008456947.1| (PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 110/225 (48.89%), Postives = 144/225 (64.00%), Query Frame = 1


Query: 21  VTMQKCVRRGGRRGREVIRNQPKGQHAIQVVDPTAYVTQADLAAMEQRYIDLLFEALAQQ 80
           +T ++  RRG + GR V  NQP    A QV +P A +T ADL  +EQR+ D + E LA+ 
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQP----AEQVANPVAPITHADLTQLEQRFNDTVTEVLARH 60

Query: 81  QPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKHLKDFRKYNPRTFDGSL 140
           Q  Q                 AA  Q     Q+LPD LS EAKHL+DFR Y+P+TF+GSL
Sbjct: 61  QLAQ-----------------AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSL 120

Query: 141 ADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKSAERMLGGDMSQITWE 200
            DP    +WLSSVETIF +M+C +DQKVQC + LL +R   WW+S ERMLGG+++QITW+
Sbjct: 121 EDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWD 180

Query: 201 QFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADALRM 246
           QFKE+F AKF  +++RDAK QEF+ L+Q  M VEE   + D L +
Sbjct: 181 QFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSL 204

[Close]

BLAST of CSPI04G20960 vs. NCBI nr
Match: gi|778701533|ref|XP_011655042.1| (PREDICTED: uncharacterized protein LOC101209878 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 8.5e-46
Identity = 110/229 (48.03%), Postives = 141/229 (61.57%), Query Frame = 1


Query: 21  VTMQKCVRRGGRRGREVIRNQPKGQHAIQVVDPTAYVTQADLAAM----EQRYIDLLFEA 80
           +T +K   RGG+ GRE   NQ   Q A QV +P A V+QADL AM    EQ + D + + 
Sbjct: 1   MTARKVASRGGQGGREAGHNQVDEQPAEQVTNPVAPVSQADLTAMSTRLEQMFKDTVTKV 60

Query: 81  LAQQQPVQQTQIALVQTPATDVQIPAARVQAPIVTQNLPDMLSAEAKHLKDFRKYNPRTF 140
           LAQ Q  Q                 AA  Q     Q+LP+ LSAEAKHL+DFR Y+P+TF
Sbjct: 61  LAQHQLAQ-----------------AAPSQGQAAPQDLPNQLSAEAKHLRDFRIYDPQTF 120

Query: 141 DGSLADPSKAHMWLSSVETIFCYMKCSNDQKVQCVICLLTDRGRGWWKSAERMLGGDMSQ 200
           +G   DP    +WLSSVE IF YMKC ++QKVQC + LL +R   WW S ERMLGG+++Q
Sbjct: 121 NGLSEDPINVMLWLSSVERIFHYMKCPDNQKVQCAVFLLRERAAIWWLSVERMLGGNVNQ 180

Query: 201 ITWEQFKENFSAKFFSATVRDAKCQEFLKLEQDNMIVEEPATKADALRM 246
            TW+QFKE+F AKFF A++RD K QEF+ L+Q  M +EE   + D L +
Sbjct: 181 FTWDQFKESFYAKFFPASLRDDKRQEFIDLKQGQMTLEEYDYEFDILSL 212

The following BLAST results are available for this feature:

BLAST of CSPI04G20960 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G20960 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBB7_CUCME	2.2e-61	56.72	Gag protease polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
Q84KB1_CUCME	4.7e-51	58.66	Gag-protease polyprotein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GB72_CUCME	1.7e-48	48.89	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GCE2_CUCME	1.5e-28	43.78	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A151RCI2_CAJCA	3.4e-17	42.02	Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_038364 PE=4 SV=1	[more]

BLAST of CSPI04G20960 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI04G20960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307135903\|gb\|ADN33767.1\|	3.2e-61	56.72	gag protease polyprotein [Cucumis melo subsp. melo]	[more]
gi\|778708157\|ref\|XP_011656132.1\|	8.2e-57	70.66	PREDICTED: uncharacterized protein LOC105435631 [Cucumis sativus]	[more]
gi\|28558780\|gb\|AAO45751.1\|	6.7e-51	58.66	gag-protease polyprotein [Cucumis melo subsp. melo]	[more]
gi\|659114199\|ref\|XP_008456947.1\|	2.4e-48	48.89	PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo]	[more]
gi\|778701533\|ref\|XP_011655042.1\|	8.5e-46	48.03	PREDICTED: uncharacterized protein LOC101209878 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005162	Retrotrans_gag_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G20960.1	CSPI04G20960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 171..248 score: 1.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G20960	Watermelon (97103) v2	cpiwmbB308
CSPI04G20960	Wax gourd	cpiwgoB411
CSPI04G20960	Cucumber (Gy14) v1	cgycpiB529
CSPI04G20960	Cucurbita maxima (Rimu)	cmacpiB679
CSPI04G20960	Cucurbita maxima (Rimu)	cmacpiB878
CSPI04G20960	Cucurbita moschata (Rifu)	cmocpiB670
CSPI04G20960	Cucurbita moschata (Rifu)	cmocpiB858
CSPI04G20960	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G20960	Melon (DHL92) v3.5.1	cpimeB328
CSPI04G20960	Melon (DHL92) v3.5.1	cpimeB333
CSPI04G20960	Melon (DHL92) v3.5.1	cpimeB341
CSPI04G20960	Watermelon (Charleston Gray)	cpiwcgB319
CSPI04G20960	Watermelon (97103) v1	cpiwmB338
CSPI04G20960	Cucurbita pepo (Zucchini)	cpecpiB066
CSPI04G20960	Cucurbita pepo (Zucchini)	cpecpiB500
CSPI04G20960	Bottle gourd (USVL1VR-Ls)	cpilsiB258
CSPI04G20960	Melon (DHL92) v3.6.1	cpimedB319
CSPI04G20960	Cucumber (Gy14) v2	cgybcpiB169
CSPI04G20960	Silver-seed gourd	carcpiB0315
CSPI04G20960	Cucumber (Chinese Long) v3	cpicucB212