CSPI04G20390 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G20390
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	17 kDa phloem lectin
Location	Chr4 : 18507123 .. 18507775 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGCCAAAGCACACATTATTTGGCATTTCCAAGAGCTTCCACAATAACATGGGGTGATGACACTCGATACTGGAGTTGGGCCACCGTGGATTTTTGCAGGTATAATCTTCAACTCAAATTTTATTTGTTCATTTATTCATATCTCATGCATTTTCATCTATTTCTTTCGTTTTCATTCATAATAATGTAAACGAGTTATTAGATTCTACTTTTTTAATATAGATTATGTTCCAATTATATGTTATTTATTATTGTTCTCTCTCACCATGGTATTTAAAACCTTGCAGCTACGCAATTGAAGAAGCCCGACTTTTACAAGTATCTTGGCTCGATTGTCGTTGGAGCATGGATGCATCTGATTTCAAACAAGATATTTGGTACAATGCAAGCGTTGAAGTAATGTTGACAAGCAACGCCTCTGGATGGAATGTTCCACTACACCTTGAAATCGAGTTGCCAGATGGGAGTAAGCAAGAGTCTCAAATAGTACTGGCAGGCAGACAACCAAATGTGTGGTTCAAGATTCCAAACGGTAAATTCATACTAAGGGGTTCTCTGACTAGCGGAACAATCCGATTCGGCTTCTACAACCATGAAGGGAATTGGAAAAGAGGCTTGAACATAAGAGCCCTTGCCATTCAAGCATAA

mRNA sequence

ATGGCAGGCCAAAGCACACATTATTTGGCATTTCCAAGAGCTTCCACAATAACATGGGGTGATGACACTCGATACTGGAGTTGGGCCACCGTGGATTTTTGCAGCTACGCAATTGAAGAAGCCCGACTTTTACAAGTATCTTGGCTCGATTGTCGTTGGAGCATGGATGCATCTGATTTCAAACAAGATATTTGGTACAATGCAAGCGTTGAAGTAATGTTGACAAGCAACGCCTCTGGATGGAATGTTCCACTACACCTTGAAATCGAGTTGCCAGATGGGAGTAAGCAAGAGTCTCAAATAGTACTGGCAGGCAGACAACCAAATGTGTGGTTCAAGATTCCAAACGGTAAATTCATACTAAGGGGTTCTCTGACTAGCGGAACAATCCGATTCGGCTTCTACAACCATGAAGGGAATTGGAAAAGAGGCTTGAACATAAGAGCCCTTGCCATTCAAGCATAA

Coding sequence (CDS)

ATGGCAGGCCAAAGCACACATTATTTGGCATTTCCAAGAGCTTCCACAATAACATGGGGTGATGACACTCGATACTGGAGTTGGGCCACCGTGGATTTTTGCAGCTACGCAATTGAAGAAGCCCGACTTTTACAAGTATCTTGGCTCGATTGTCGTTGGAGCATGGATGCATCTGATTTCAAACAAGATATTTGGTACAATGCAAGCGTTGAAGTAATGTTGACAAGCAACGCCTCTGGATGGAATGTTCCACTACACCTTGAAATCGAGTTGCCAGATGGGAGTAAGCAAGAGTCTCAAATAGTACTGGCAGGCAGACAACCAAATGTGTGGTTCAAGATTCCAAACGGTAAATTCATACTAAGGGGTTCTCTGACTAGCGGAACAATCCGATTCGGCTTCTACAACCATGAAGGGAATTGGAAAAGAGGCTTGAACATAAGAGCCCTTGCCATTCAAGCATAA

Homology

[Close]

BLAST of CSPI04G20390 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25
Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 1


Query: 4   QSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDFKQD 63
           +S  ++ + R   ITW  D RYW W         +E A L+ V WL+   +++ S     
Sbjct: 58  ESNCFMLYARDLLITWSQDKRYWRWNPFQEHGNTLEVAELIDVCWLNIVGNIETSVLSPG 117

Query: 64  IWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFILRG 123
           I Y A+ EVMLT++ASGW +P+ +++++PDGS+QESQ+ L  +   VWF I  G F +  
Sbjct: 118 ISYEAAFEVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDKPRGVWFFISVGHFKISV 177

Query: 124 SLTSGTIRFGFYNHEGNWKRGLNIRALAIQ 154
             T G I F    H+   KRGL ++ L IQ
Sbjct: 178 GETIGNIEFSIVQHQ-EAKRGLLVKGLVIQ 206

[Close]

BLAST of CSPI04G20390 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 1


Query: 5   STHYLAFPRASTITWGDDTRYWSWAT-VDFCSYAIEEARLLQVSWLDCRWSMDASDFKQD 64
           S  ++ F +  +ITW DD  YW+W T  +  +  +E   L  V WLD     D  +    
Sbjct: 92  SNCFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPG 151

Query: 65  IWYNASVEVMLTSNASGWNVPLHLEIELPDGSK--QESQIVLAGRQPNVWFKIPNGKFIL 124
           I Y    +V L   A GW+ P++L++ LP+G +  QE ++ L       W  +  G+F+ 
Sbjct: 152 IVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVP 211

Query: 125 RGSLTSGTIRFGFYNH-EGNWKRGLNIRALAIQ 154
             S  +G I F  Y H  G WK+GL+++ +AI+
Sbjct: 212 EKS-AAGEITFSMYEHAAGVWKKGLSLKGVAIR 243

[Close]

BLAST of CSPI04G20390 vs. Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 49/152 (32.24%), Postives = 74/152 (48.68%), Query Frame = 1


Query: 8   YLAFPRASTITWGDDTRYWSWATV--DFCSYAIEEARLLQ-VSWLDCRWSMDASDFKQDI 67
           ++ + R  +I W D   YWSW  +  D  S  + +A +L+ V WLD     D  +   + 
Sbjct: 12  HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLET 71

Query: 68  WYNASVEVMLTSNASGWNVPLHLEIELPDGSK--QESQIVLAGRQPNVWFKIPNGKFILR 127
            Y     V L   ASGWN+P++L++ LPDG K  QE  + L       W  I  G+F+  
Sbjct: 72  TYEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTS 131

Query: 128 GSLTSGTIRFGFYNHEG-NWKRGLNIRALAIQ 154
               +G I F  Y  +   WKRGL ++ + I+
Sbjct: 132 PD-NAGEISFSMYETKSCCWKRGLFVKCVEIR 162

[Close]

BLAST of CSPI04G20390 vs. TrEMBL
Match: Q8LK69_CUCSA (17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-7 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 7.2e-87
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           LRGSLTSGTIRFGFYNHEGNWKRGLNIR LAIQA
Sbjct: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRTLAIQA 154

[Close]

BLAST of CSPI04G20390 vs. TrEMBL
Match: A0A0A0KYP0_CUCSA (Phloem lectin OS=Cucumis sativus GN=Csa_4G501830 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.6e-86
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LGGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 154

[Close]

BLAST of CSPI04G20390 vs. TrEMBL
Match: Q8LK70_CUCSA (17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-1 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-85
Identity = 150/154 (97.40%), Postives = 151/154 (98.05%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGS Q+SQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSTQKSQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LSGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 154

[Close]

BLAST of CSPI04G20390 vs. TrEMBL
Match: Q8L5A9_CUCSA (17 kDa phloem lectin OS=Cucumis sativus GN=Lec17 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-80
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMD SDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDVSDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           K+DIWYNASVEVMLTSNASGWNVPL+LEIELP GS+Q+SQIVL GRQPNVWFKI  GKFI
Sbjct: 61  KKDIWYNASVEVMLTSNASGWNVPLYLEIELP-GSEQQSQIVLEGRQPNVWFKISLGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LSGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 153

[Close]

BLAST of CSPI04G20390 vs. TrEMBL
Match: Q8LK96_CUCME (17 kDa phloem lectin Lec17-3 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.0e-72
Identity = 119/154 (77.27%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHY+A+PRA++ITW DDTRYWSWA  DFC Y IEEARLLQVSWLDCRWSMD+S F
Sbjct: 1   MAGQSTHYVAYPRAASITWSDDTRYWSWAPADFCGYPIEEARLLQVSWLDCRWSMDSSSF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQD+WYN S+EVM+ + ASGW++PL+LEI++PDGSKQESQIVLAG+QPNVWFKIP GKFI
Sbjct: 61  KQDLWYNVSIEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           + GS+TSG +RFGFYNH G+WKRGL +RAL+IQA
Sbjct: 121 ISGSVTSGILRFGFYNHGGHWKRGLTVRALSIQA 154

[Close]

BLAST of CSPI04G20390 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1)

HSP 1 Score: 90.5 bits (223), Expect = 9.8e-19
Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 1


Query: 5   STHYLAFPRASTITWGDDTRYWSWAT-VDFCSYAIEEARLLQVSWLDCRWSMDASDFKQD 64
           S  ++ F +  +ITW DD  YW+W T  +  +  +E   L  V WLD     D  +    
Sbjct: 92  SNCFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPG 151

Query: 65  IWYNASVEVMLTSNASGWNVPLHLEIELPDGSK--QESQIVLAGRQPNVWFKIPNGKFIL 124
           I Y    +V L   A GW+ P++L++ LP+G +  QE ++ L       W  +  G+F+ 
Sbjct: 152 IVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVP 211

Query: 125 RGSLTSGTIRFGFYNH-EGNWKRGLNIRALAIQ 154
             S  +G I F  Y H  G WK+GL+++ +AI+
Sbjct: 212 EKS-AAGEITFSMYEHAAGVWKKGLSLKGVAIR 243

[Close]

BLAST of CSPI04G20390 vs. TAIR10
Match: AT1G33920.1 (AT1G33920.1 phloem protein 2-A4)

HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18
Identity = 49/152 (32.24%), Postives = 74/152 (48.68%), Query Frame = 1


Query: 8   YLAFPRASTITWGDDTRYWSWATV--DFCSYAIEEARLLQ-VSWLDCRWSMDASDFKQDI 67
           ++ + R  +I W D   YWSW  +  D  S  + +A +L+ V WLD     D  +   + 
Sbjct: 12  HMIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLET 71

Query: 68  WYNASVEVMLTSNASGWNVPLHLEIELPDGSK--QESQIVLAGRQPNVWFKIPNGKFILR 127
            Y     V L   ASGWN+P++L++ LPDG K  QE  + L       W  I  G+F+  
Sbjct: 72  TYEVVYVVKLEDTASGWNIPVNLKLTLPDGKKRPQERSMCLKEHIGKRWIDISAGEFVTS 131

Query: 128 GSLTSGTIRFGFYNHEG-NWKRGLNIRALAIQ 154
               +G I F  Y  +   WKRGL ++ + I+
Sbjct: 132 PD-NAGEISFSMYETKSCCWKRGLFVKCVEIR 162

[Close]

BLAST of CSPI04G20390 vs. NCBI nr
Match: gi|21745319|gb|AAM77344.1|AF520580_1 (17 kDa phloem lectin [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.0e-86
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           LRGSLTSGTIRFGFYNHEGNWKRGLNIR LAIQA
Sbjct: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRTLAIQA 154

[Close]

BLAST of CSPI04G20390 vs. NCBI nr
Match: gi|778694948|ref|XP_011653899.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 2.3e-86
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LGGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 154

[Close]

BLAST of CSPI04G20390 vs. NCBI nr
Match: gi|21745315|gb|AAM77342.1|AF520578_1 (17 kDa phloem lectin [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.5e-85
Identity = 150/154 (97.40%), Postives = 151/154 (98.05%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGS Q+SQIVLAGRQPNVWFKIP GKFI
Sbjct: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSTQKSQIVLAGRQPNVWFKIPIGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LSGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 154

[Close]

BLAST of CSPI04G20390 vs. NCBI nr
Match: gi|21686472|gb|AAM74922.1|AF517155_1 (17 kDa phloem lectin [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-80
Identity = 144/154 (93.51%), Postives = 148/154 (96.10%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMD SDF
Sbjct: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDVSDF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           K+DIWYNASVEVMLTSNASGWNVPL+LEIELP GS+Q+SQIVL GRQPNVWFKI  GKFI
Sbjct: 61  KKDIWYNASVEVMLTSNASGWNVPLYLEIELP-GSEQQSQIVLEGRQPNVWFKISLGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           L GSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA
Sbjct: 121 LSGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 153

[Close]

BLAST of CSPI04G20390 vs. NCBI nr
Match: gi|659121464|ref|XP_008460673.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 121/154 (78.57%), Postives = 141/154 (91.56%), Query Frame = 1


Query: 1   MAGQSTHYLAFPRASTITWGDDTRYWSWATVDFCSYAIEEARLLQVSWLDCRWSMDASDF 60
           MAGQSTHY+A+PRA++ITW DDTRYWSWA VDFC Y IEEARLLQVSWLDCRW+MD+S F
Sbjct: 1   MAGQSTHYVAYPRAASITWSDDTRYWSWAPVDFCGYPIEEARLLQVSWLDCRWTMDSSSF 60

Query: 61  KQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGSKQESQIVLAGRQPNVWFKIPNGKFI 120
           KQD+WYNASV+VM+T+ ASGWN+PL++EI++PDGSKQESQIVLAG+QPNVWFKIP GKFI
Sbjct: 61  KQDVWYNASVDVMMTNTASGWNIPLNIEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFI 120

Query: 121 LRGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQA 155
           +  S+TSG IRFGFYNH G+WKRGL +RAL IQA
Sbjct: 121 ISSSVTSGIIRFGFYNHGGHWKRGLIVRALLIQA 154

The following BLAST results are available for this feature:

BLAST of CSPI04G20390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEC_LUFAC	2.3e-25	38.00	Lectin OS=Luffa acutangula PE=1 SV=1	[more]
P2A01_ARATH	1.7e-17	32.03	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1	[more]
P2A04_ARATH	1.1e-16	32.24	Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A...	[more]

BLAST of CSPI04G20390 vs. TrEMBL


Match Name	E-value	Identity	Description
Q8LK69_CUCSA	7.2e-87	98.70	17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-7 PE=4 SV=1	[more]
A0A0A0KYP0_CUCSA	1.6e-86	98.70	Phloem lectin OS=Cucumis sativus GN=Csa_4G501830 PE=4 SV=1	[more]
Q8LK70_CUCSA	1.8e-85	97.40	17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-1 PE=4 SV=1	[more]
Q8L5A9_CUCSA	1.3e-80	93.51	17 kDa phloem lectin OS=Cucumis sativus GN=Lec17 PE=2 SV=1	[more]
Q8LK96_CUCME	5.0e-72	77.27	17 kDa phloem lectin Lec17-3 OS=Cucumis melo PE=2 SV=1	[more]

BLAST of CSPI04G20390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19840.1	9.8e-19	32.03	phloem protein 2-A1	[more]
AT1G33920.1	6.3e-18	32.24	phloem protein 2-A4	[more]

BLAST of CSPI04G20390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|21745319\|gb\|AAM77344.1\|AF520580_1	1.0e-86	98.70	17 kDa phloem lectin [Cucumis sativus]	[more]
gi\|778694948\|ref\|XP_011653899.1\|	2.3e-86	98.70	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Cucumis sativus]	[more]
gi\|21745315\|gb\|AAM77342.1\|AF520578_1	2.5e-85	97.40	17 kDa phloem lectin [Cucumis sativus]	[more]
gi\|21686472\|gb\|AAM74922.1\|AF517155_1	1.9e-80	93.51	17 kDa phloem lectin [Cucumis sativus]	[more]
gi\|659121464\|ref\|XP_008460673.1\|	3.2e-72	78.57	PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0030246	carbohydrate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G20390.1	CSPI04G20390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 12..153 score: 6.5
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 8..153 score: 3.9
None	No IPR available	PANTHER	PTHR32278:SF3	SUBFAMILY NOT NAMED	coord: 8..153 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G20390	Cucumber (Gy14) v1	cgycpiB527
CSPI04G20390	Cucurbita maxima (Rimu)	cmacpiB673
CSPI04G20390	Cucurbita moschata (Rifu)	cmocpiB667
CSPI04G20390	Cucurbita moschata (Rifu)	cmocpiB858
CSPI04G20390	Cucurbita moschata (Rifu)	cmocpiB868
CSPI04G20390	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G20390	Cucumber (Chinese Long) v2	cpicuB187
CSPI04G20390	Melon (DHL92) v3.5.1	cpimeB334
CSPI04G20390	Watermelon (Charleston Gray)	cpiwcgB321
CSPI04G20390	Watermelon (97103) v1	cpiwmB348
CSPI04G20390	Cucurbita pepo (Zucchini)	cpecpiB067
CSPI04G20390	Cucurbita pepo (Zucchini)	cpecpiB493
CSPI04G20390	Bottle gourd (USVL1VR-Ls)	cpilsiB263
CSPI04G20390	Melon (DHL92) v3.6.1	cpimedB325
CSPI04G20390	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G20390	Silver-seed gourd	carcpiB0319
CSPI04G20390	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G20390	Cucumber (Chinese Long) v3	cpicucB214
CSPI04G20390	Watermelon (97103) v2	cpiwmbB308
CSPI04G20390	Watermelon (97103) v2	cpiwmbB314
CSPI04G20390	Wax gourd	cpiwgoB396