CSPI04G19720 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G19720
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 17513562 .. 17515974 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAATAATTAAATTTGCCTTTAACATGTGGTATCAGAGCCCATTAAACCCAAACGAGTATTCGGTCTTCGGTCCAAGATAGGTGAAACCAAAGAGGCACCATCATCTTGAGGGGGCATGTTGGAGAAGTTGAGAGATATTTGATTGTTTTTCTAATCTTCTTCACCCCTTCCCAAGTCAATAACTAGAATGAAAAAAATGGGAATACCAACGCATCCATCCGGGAATAAACGATTGATCTCGATTAATAGACCCGCTAAAGCCCCGAACCATATAGTACTTACTACCGGTGCCACGGAGAGATATGTTTTTAGATCTCGCAGTGAAAACCCTCCTACTTTATAGTAATTTGTAATAAATAATGATAGTAATTTGTAATAAATAATGATAGGTAATTCACATTGGAAAAACCAAGGGGACTCATACTCCATATAATGTAGATGGGCTACTCCTCTCATTGCCAATTGGTTTTGAGATGGAACCCCACACTACCAAATTTAACCCAACAGAAATCCCCTCAAGGATTTAAAAAAATATCACAAAGGAATAAACTTATTTTCAACATATTTCTTTTGACAAAATTACCCAACATGTTTGTTCCTCACATACTAAGCCTGATATGGCTTCTTGTTTTAAAATGTTATGTCATATTTTGTCAGCCACAATGCTTTATACAACAAATACGTGATAGAGATATGACAATAAACAATGTCCTTTCAGATGGAAGTCTAACCCCGCAAATGAAGGTATGTGATTTTGGTTCCTCTAAGGTCTTTGATTGAGGGAATTTTATTAATTTTCTCATTTTAAATAAACATGTCCTTATGCTTGTGCTCTCGATCTCATTGTCAATTTGTTCCGAGTAATTGCATTCAAAACCAAAAAGAAAAATAAGTATCATATCTATGGCTTCTTGTTTACACCATACTTTGTCTGACACAATGCTACTTTATGCAGCGAATATATCGTACATGTTTGATGCTAAACAAGAACCTTTCAGATAAAACCCTAGCTGAGAAGCTGAAGACATTTGATTTTGGCTTCTCCAAGGTCTTTGATTAAGAGAATTTCATTATTTAATATGCCGATTTTAAATGCAAGTTTCCGTATAATATTGTGTGCTCTTCTATTGTCAATTTGTGGTAAGTAATTGCATTAACAATTTAATATACAAATTTGATATTGTGAGATTCTAAGCCTCTTGATAAGGCGTCTTGTTTAAATATGTTCTCTACCATCCATTCTTTCTCTGACACGATGCTTTTACACAGCAAACATGTACTAAATATATGTCGATGCTGAACATTATCCTTTCAGATGGAAGTACAAGTACAACGTCGAAATTATTAAAGGTAACTTAGTATGTGATTTTGGGCTCTATCTTTGATTAAGGGAATTTTGTTAATTTGCTCATTTTAGATAAACATGTCCTTGTACTTACACTCTTCTATTGTACTTCCATTGAAAACAAAAATCAAATGTTTGTTTTGAAAAATACTATATGTATATTATGGCTTCTTGTTTAAAAATGTGTTATGCACCCTATTATTCATAGTTATAGATGCAGGGGTAAAAAGGGGATTGATCAAGTGACAGCATAGCCACTGGGAGACATGGGAGGAATATCTGTTGGGGGACCCACTCCCGAGAGAATTGGAGTACTTAAGGAATGTTTTGAGATTGTTGAAGATTAGGTCACTTTTGGGAAAAGCTGTGGAATGCTTTTTGGTCGGAGAACCATCTTCTTGAAATTGCTGGGGGAGCTTTCTTATTTTCTTTCCTTTATTACTACTTGTTTTGCTTGCTGTTATCATTCTCCCTGGTTTAAGTAAGCATTGTGAAAACTACCCTCTTTTCTATTTTCAATATATATCATCACAGGGTACCTATCTTTGTTTTCTCTAGTATTGTTGGGATTTTCTAAGTGGTAGGTAATGAAGTCCTAACATATTAGTTATTAGAGCCGCCAAAAATCCTTGAGAGGACACGAGGAATGGCATAGAAAGAATTGGAGGAAATGATGGAGATGAGCGAGAAAAAGATCATGGATTTGAAAGAGTTGATACACGTGTGGAAAAACTATCGGATGAAGTGACGGAAAGAGTTATGATATATATATTTATATTTATGCCATATGTTCTTTATTGTAAGTCTACTCCCGACGACCTCCACCGCTTCCTTCATCACATGATTTGGGGTCGAGTGATGATCTTCCAATTGCTCTTCGTAAAGGTAAAAGCAAATGTACTTACCCCGTTTCTTTCTTTACTTCCTATCACCAGCTATCTCCATCCACATATGCTTTTATTACGTCTCTTAAGTCCACATCTATTCCTAATTCTATTCATGAAGCTTTATCTCATCCTGGCTGCCGAAATGCAATGATTGAGGAGATGACTGCTTTAGATGATAA

mRNA sequence

ATGGGCTACTCCTCTCATTGCCAATTGGTTTTGAGATGGAACCCCACACTACCAAATTTAACCCAACAGAAATCCCCTCAAGGATTTAAAAAAATATCACAAAGGAATAAACTTATTTTCAACATATTTCTTTTGACAAAATTACCCAACATGTTTGTTCCTCACATACTAAGCCTGATATGGCTTCTTGTTTTAAAATGTTATGTCATATTTTGTCAGCCACAATGCTTTATACAACAAATACGTGATAGAGATATGACAATAAACAATGTCCTTTCAGATGGAAGTCTAACCCCGCAAATGAAGCGAATATATCGTACATGTTTGATGCTAAACAAGAACCTTTCAGATAAAACCCTAGCTGAGAAGCTGAAGACATTTGATTTTGGCTTCTCCAAGCAAACATGTACTAAATATATGTCGATGCTGAACATTATCCTTTCAGATGGAAGTACAAGTACAACGTCGAAATTATTAAAGATGCAGGGGTAA

Coding sequence (CDS)

ATGGGCTACTCCTCTCATTGCCAATTGGTTTTGAGATGGAACCCCACACTACCAAATTTAACCCAACAGAAATCCCCTCAAGGATTTAAAAAAATATCACAAAGGAATAAACTTATTTTCAACATATTTCTTTTGACAAAATTACCCAACATGTTTGTTCCTCACATACTAAGCCTGATATGGCTTCTTGTTTTAAAATGTTATGTCATATTTTGTCAGCCACAATGCTTTATACAACAAATACGTGATAGAGATATGACAATAAACAATGTCCTTTCAGATGGAAGTCTAACCCCGCAAATGAAGCGAATATATCGTACATGTTTGATGCTAAACAAGAACCTTTCAGATAAAACCCTAGCTGAGAAGCTGAAGACATTTGATTTTGGCTTCTCCAAGCAAACATGTACTAAATATATGTCGATGCTGAACATTATCCTTTCAGATGGAAGTACAAGTACAACGTCGAAATTATTAAAGATGCAGGGGTAA
Homology
[Close]
BLAST of CSPI04G19720 vs. TrEMBL
Match: A0A0A0L3P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G454150 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 86  MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI 145
           MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI
Sbjct: 1   MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI 60

Query: 146 ILSDGSTSTTSKLLK 161
           ILSDGSTSTTSKLLK
Sbjct: 61  ILSDGSTSTTSKLLK 75

[Close]
BLAST of CSPI04G19720 vs. NCBI nr
Match: gi|778694842|ref|XP_011653877.1| (PREDICTED: serine/threonine-protein kinase SRK2G-like isoform X1 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 73  QPQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS 132
           +PQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS
Sbjct: 227 KPQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS 286

Query: 133 KQTCTKYMSMLNIILSDGSTSTTSKLLK 161
           KQTCTKYMSMLNIILSDGSTSTTSKLLK
Sbjct: 287 KQTCTKYMSMLNIILSDGSTSTTSKLLK 314

[Close]
BLAST of CSPI04G19720 vs. NCBI nr
Match: gi|778694846|ref|XP_011653878.1| (PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like isoform X2 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 73  QPQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS 132
           +PQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS
Sbjct: 118 KPQCFIQQIRDRDMTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFS 177

Query: 133 KQTCTKYMSMLNIILSDGSTSTTSKLLK 161
           KQTCTKYMSMLNIILSDGSTSTTSKLLK
Sbjct: 178 KQTCTKYMSMLNIILSDGSTSTTSKLLK 205

[Close]
BLAST of CSPI04G19720 vs. NCBI nr
Match: gi|700199598|gb|KGN54756.1| (hypothetical protein Csa_4G454150 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-32
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1 

Query: 86  MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI 145
           MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI
Sbjct: 1   MTINNVLSDGSLTPQMKRIYRTCLMLNKNLSDKTLAEKLKTFDFGFSKQTCTKYMSMLNI 60

Query: 146 ILSDGSTSTTSKLLK 161
           ILSDGSTSTTSKLLK
Sbjct: 61  ILSDGSTSTTSKLLK 75

The following BLAST results are available for this feature:
BLAST of CSPI04G19720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G19720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3P0_CUCSA8.2e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G454150 PE=4 SV=1[more]
BLAST of CSPI04G19720 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G19720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694842|ref|XP_011653877.1|1.2e-4098.86PREDICTED: serine/threonine-protein kinase SRK2G-like isoform X1 [Cucumis sativu... [more]
gi|778694846|ref|XP_011653878.1|1.2e-4098.86PREDICTED: CBL-interacting serine/threonine-protein kinase 17-like isoform X2 [C... [more]
gi|700199598|gb|KGN54756.1|1.2e-32100.00hypothetical protein Csa_4G454150 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G19720.3CSPI04G19720.3mRNA
CSPI04G19720.2CSPI04G19720.2mRNA
CSPI04G19720.1CSPI04G19720.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G19720CsaV3_4G030060Cucumber (Chinese Long) v3cpicucB214
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G19720Cucumber (Chinese Long) v2cpicuB181
CSPI04G19720Melon (DHL92) v3.5.1cpimeB324
CSPI04G19720Watermelon (Charleston Gray)cpiwcgB309
CSPI04G19720Watermelon (Charleston Gray)cpiwcgB322
CSPI04G19720Watermelon (97103) v1cpiwmB348
CSPI04G19720Cucurbita pepo (Zucchini)cpecpiB067
CSPI04G19720Bottle gourd (USVL1VR-Ls)cpilsiB249
CSPI04G19720Bottle gourd (USVL1VR-Ls)cpilsiB250
CSPI04G19720Melon (DHL92) v3.6.1cpimedB316
CSPI04G19720Cucumber (Gy14) v2cgybcpiB170
CSPI04G19720Cucumber (Gy14) v2cgybcpiB176
CSPI04G19720Silver-seed gourdcarcpiB0552
CSPI04G19720Cucumber (Chinese Long) v3cpicucB212
CSPI04G19720Cucumber (Chinese Long) v3cpicucB222
CSPI04G19720Watermelon (97103) v2cpiwmbB300
CSPI04G19720Watermelon (97103) v2cpiwmbB312
CSPI04G19720Wax gourdcpiwgoB396
CSPI04G19720Wax gourdcpiwgoB403
CSPI04G19720Cucumber (Gy14) v1cgycpiB267
CSPI04G19720Cucurbita maxima (Rimu)cmacpiB673