CSPI04G19330 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G19330
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transcription factor ORG2-like protein
Location	Chr4 : 17022503 .. 17024625 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACACAAAACAATTTCAAGTCTCCAATATTTTCCAAAACCCTTTTACTTTCCTAATCCATTTTCATTTTTTTTTTTTATCATGTTGGCAGTATCCTCTCCTTTGTTTTCCCCTCATCAATGGCAATTCGAAGATCCCATCTCTCTCCATCACCAACACAACTCTCTCTTCTCTCCCTTTGAACCTTCAGATCATTCATTTTACCTCCAATTCCCTCCGCCCCCGTTGGACCCTTCGCACGGTGACCACGACCACTATCCTTCCTCTGCTGCACCCTCCCCAGAGGGTGTCTCCAACGTCTCCAAGATGGCCAAGAAACTTAGCCATAATGCTAGTGAGCGCGATCGTCGAAAGAAGATCAACTCTCTTTACTCCTCTCTACGAGCCCTCCTTCCCTCCTCAGATCAAATGGTAAGATTTATCATCTCTATCTGAAAAGTTAAGCAATATTCAAATCTTTAAATTTAGTCCTTAATATGTGATTAATTTTATGCACAAACCATACATGATCCAAATATACAAACATATTTCAACGTGAATTTAACTTAATACTAATCAGAATAACTTTGCATATCCTACAAGTCGATAAACATGTAGGTTAACCGTGCTTAATATCTTTTTTCTCTAGCCAAAATAGCATTGCGATTGTGAAATGGAGATTCAAATCTATTGATTTTTATTTACTTTGTTAAATTATCCTCATGTTAACTCCATTGTACTAGACTTTTAATCTCCACGGAGTTCCTTTGACCACCGTGGATAATTGAAAACGTTCGTCCATTAATGATAAATTTAGTAATAGAGAGTCGTGGTCTTTTTTTCTCACAGAAGAAACTGAGTAATCCGGCGACGATCTCGAGAATATTAAGCTACATACCAGAGCTACAACAACAAGTGGAAGAGCAGATGAGGAAGAAAGAAGAGCTCATGGCAGCGATGGTTGGACAGGAAGTTAAGAATGATGAAGAAAAGAAAATGAAATCCGCAGTTTCAAGCTCCTCATCGATCATTTCCGCAAGTCGACTTAGTCGACATGAAATGGCGATTCAGATATCCACCGATATCAACGGAGGCCAGCGAAATTATTTGTCGGAGATATTGATTTGCTTGGAAGAAGAAGGTCTCCTTCTGTTGAATGCTTCTTCATTTGAGTCTTTTGATGGGAAGATTTTCCATAATTTGCATCTTCAGGTATTTTTTTTTTATTATTATTATTATTATATTTTAATTTAGGTAATTTTTTTGTTTGCAAAACCATTCGTTATTTAATTTCAATTATGTTTATTTATTTTTACATTTTTAAGTGATGAATGACGTTTGAGAAAGGCTTATTTTGATCCTTTGTTAAAAAACTACTTTTTTTCTTTTTAATCAATTTTATTCCTAGATATTGTTTCATTGCAACTGATAATCAAATTATGATTGGAGGAAGAAATGAATAATGGGCTTTGGTGGAAAGATGCTGAATACAAAATGATTATATAACTAAGCTTAATGGGATGTTTAAATTGACAGTATAAGTAAGTACATAATTAATATTTAAATAATTAACTAATCAAATTTTCATTATTATCCCTAGTGGTATAATGAAAACAAATTTGAGTATTTAACTTTTCAATCTTTTAAGTAAAAAAACAACCATTTCTTAAAGTTATATCCTAAACTACATGAAGAAAAATCCCAAACCATCATTTTGAACATAACTTATTGGTTAAACATCATTTGCATCTCAAAAGTTGATAATTAGATGATTATTAAATTCTAATTAAAGAAGATAAACTAAAAAAATAGCATATGCATATGCTTCAAATTTCTTGGGAAAGGTTATATTTAAACATGTATGAATAGCAATTATTATGTAACTTGATCTCTTTTTCTTTGTTAATATTATTTGTTTAGAAGCAACAAAGAAAGTTCATAGTATTTTTAAGGTAAAATGTAGAAATTAAAGTTTGATATATGAAACTTAATTATGTTGTTAATTTTGAATGATAAACACAGATGGGAAGCAATTGCAGAATGGAGCCTAAAATGCTGAGTAATATGCTCTTGGAGATGTTCCCATGACATAGGAAGACAGAGTGGATTAATATGCACCACAAGATTAATTAATTAGTAACAG

mRNA sequence

ATGTTGGCAGTATCCTCTCCTTTGTTTTCCCCTCATCAATGGCAATTCGAAGATCCCATCTCTCTCCATCACCAACACAACTCTCTCTTCTCTCCCTTTGAACCTTCAGATCATTCATTTTACCTCCAATTCCCTCCGCCCCCGTTGGACCCTTCGCACGGTGACCACGACCACTATCCTTCCTCTGCTGCACCCTCCCCAGAGGGTGTCTCCAACGTCTCCAAGATGGCCAAGAAACTTAGCCATAATGCTAGTGAGCGCGATCGTCGAAAGAAGATCAACTCTCTTTACTCCTCTCTACGAGCCCTCCTTCCCTCCTCAGATCAAATGAAGAAACTGAGTAATCCGGCGACGATCTCGAGAATATTAAGCTACATACCAGAGCTACAACAACAAGTGGAAGAGCAGATGAGGAAGAAAGAAGAGCTCATGGCAGCGATGGTTGGACAGGAAGTTAAGAATGATGAAGAAAAGAAAATGAAATCCGCAGTTTCAAGCTCCTCATCGATCATTTCCGCAAGTCGACTTAGTCGACATGAAATGGCGATTCAGATATCCACCGATATCAACGGAGGCCAGCGAAATTATTTGTCGGAGATATTGATTTGCTTGGAAGAAGAAGGTCTCCTTCTGTTGAATGCTTCTTCATTTGAGTCTTTTGATGGGAAGATTTTCCATAATTTGCATCTTCAGATGGGAAGCAATTGCAGAATGGAGCCTAAAATGCTGAGTAATATGCTCTTGGAGATGTTCCCATGA

Coding sequence (CDS)

ATGTTGGCAGTATCCTCTCCTTTGTTTTCCCCTCATCAATGGCAATTCGAAGATCCCATCTCTCTCCATCACCAACACAACTCTCTCTTCTCTCCCTTTGAACCTTCAGATCATTCATTTTACCTCCAATTCCCTCCGCCCCCGTTGGACCCTTCGCACGGTGACCACGACCACTATCCTTCCTCTGCTGCACCCTCCCCAGAGGGTGTCTCCAACGTCTCCAAGATGGCCAAGAAACTTAGCCATAATGCTAGTGAGCGCGATCGTCGAAAGAAGATCAACTCTCTTTACTCCTCTCTACGAGCCCTCCTTCCCTCCTCAGATCAAATGAAGAAACTGAGTAATCCGGCGACGATCTCGAGAATATTAAGCTACATACCAGAGCTACAACAACAAGTGGAAGAGCAGATGAGGAAGAAAGAAGAGCTCATGGCAGCGATGGTTGGACAGGAAGTTAAGAATGATGAAGAAAAGAAAATGAAATCCGCAGTTTCAAGCTCCTCATCGATCATTTCCGCAAGTCGACTTAGTCGACATGAAATGGCGATTCAGATATCCACCGATATCAACGGAGGCCAGCGAAATTATTTGTCGGAGATATTGATTTGCTTGGAAGAAGAAGGTCTCCTTCTGTTGAATGCTTCTTCATTTGAGTCTTTTGATGGGAAGATTTTCCATAATTTGCATCTTCAGATGGGAAGCAATTGCAGAATGGAGCCTAAAATGCTGAGTAATATGCTCTTGGAGATGTTCCCATGA

Homology

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BLAST of CSPI04G19330 vs. Swiss-Prot
Match: BH101_ARATH (Transcription factor bHLH101 OS=Arabidopsis thaliana GN=BHLH101 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 79/175 (45.14%), Postives = 119/175 (68.00%), Query Frame = 1


Query: 76  MAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEE 135
           + KKL+HNASERDRR+K+N+LYSSLRALLP SDQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 136 QMRKKEELMAAMVGQEVKNDEEKK--MKSAVSSSSSIISASRLSRHEMAIQISTDINGGQ 195
             R+KEEL+  +  +  +     K  M S  SSSS  I+A+ L+  E+A+QI+T     +
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 196 RNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEPKMLSNMLL 249
              +S++L+ LEE GL +++ SS  S   +IF+ LHLQM  +C++  + L N +L
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQMRGDCKVRLEELINGML 234

[Close]

BLAST of CSPI04G19330 vs. Swiss-Prot
Match: BH100_ARATH (Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.0e-27
Identity = 89/226 (39.38%), Postives = 141/226 (62.39%), Query Frame = 1


Query: 37  DHSFY---------LQFPPPPLDPSHGDHDHYPSSAAPSPEGVSNVSKMAKKLSHNASER 96
           DHSFY         L FP P L  +H       + ++ +   + +   + KKL+HNASER
Sbjct: 18  DHSFYETDDVSNTFLDFPLPDLTVTH------ENVSSENNRTLLDNPVVMKKLNHNASER 77

Query: 97  DRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEEQMRKKEELMAAM 156
           +RRKKIN+++SSLR+ LP ++Q KKLS  AT+S+ L YIPELQ+QV++ M+KKEEL   +
Sbjct: 78  ERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKKEELSFQI 137

Query: 157 VGQE--VKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQISTDINGGQRNYLSEILICLE 216
            GQ   V  D+  K +  V+S +S +S++RLS  E+ +QIS+     ++     +L  +E
Sbjct: 138 SGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKCSFGNVLSGVE 197

Query: 217 EEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEPKMLSNMLLEMF 252
           E+GL+L+ ASS  S   ++F+++HLQ+  N ++  + L + LL ++
Sbjct: 198 EDGLVLVGASSSRSHGERLFYSMHLQI-KNGQVNSEELGDRLLYLY 234

[Close]

BLAST of CSPI04G19330 vs. Swiss-Prot
Match: ORG3_ARATH (Transcription factor ORG3 OS=Arabidopsis thaliana GN=ORG3 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 95/261 (36.40%), Postives = 151/261 (57.85%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHG------ 60
           M A+  PLF    W          +++S +   +  ++  +L FP P  + ++G      
Sbjct: 1   MCALVPPLFPNFGWPSTG------EYDSYYLAGDILNNGGFLDFPVP--EETYGAVTAVT 60

Query: 61  -DHDHYPSSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKL 120
              + +  S +     + N   + KKL+HNASERDRR+KINSL+SSLR+ LP+S Q KKL
Sbjct: 61  QHQNSFGVSVSSEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKL 120

Query: 121 SNPATISRILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISA 180
           S PAT+SR L YIPELQ+QV++ ++KKEEL+  + GQ       K+   AV++  S +SA
Sbjct: 121 SIPATVSRSLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSA 180

Query: 181 SRLSRHEMAIQISTDINGGQRNY-LSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQM 240
           +RL  +E+ +QIS   +    N+ +S +L  LEE+  +L++ SS  S   ++F+ LHLQ+
Sbjct: 181 TRLGDNEVMVQIS---SSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 240

Query: 241 G--SNCRMEPKMLSNMLLEMF 252
               N ++  + LS  +L ++
Sbjct: 241 EKIENYKLNCEELSQRMLYLY 250

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BLAST of CSPI04G19330 vs. Swiss-Prot
Match: ORG2_ARATH (Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26
Identity = 82/210 (39.05%), Postives = 129/210 (61.43%), Query Frame = 1


Query: 24  HQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYPSSAAPSPEGVSNVSKMAKKLSHN 83
           +Q+ S +   +  ++  +L+   P         +    S +     + N   + KKL+HN
Sbjct: 18  NQYESYYGAGDNLNNGTFLELTVPQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHN 77

Query: 84  ASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEEQMRKKEEL 143
           ASERDRRKKIN+L+SSLR+ LP+SDQ KKLS P T+S+ L YIPELQQQV+  ++KKEE+
Sbjct: 78  ASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEI 137

Query: 144 MAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQISTDINGGQRNY-LSEILI 203
           +  + GQ      +K+   AV+S  S +SA+RL  +E+ +Q+S   +    N+ +S +L 
Sbjct: 138 LVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVS---SSKIHNFSISNVLG 197

Query: 204 CLEEEGLLLLNASSFESFDGKIFHNLHLQM 233
            +EE+G +L++ SS  S   ++F+ LHLQ+
Sbjct: 198 GIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

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BLAST of CSPI04G19330 vs. TrEMBL
Match: A0A0A0L0Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G434480 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 3.6e-120
Identity = 231/236 (97.88%), Postives = 234/236 (99.15%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHG+HDHYP
Sbjct: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGEHDHYP 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS
Sbjct: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE
Sbjct: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNC 237
           MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQ+  +C
Sbjct: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQILFHC 236

[Close]

BLAST of CSPI04G19330 vs. TrEMBL
Match: D7TIN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05300 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47
Identity = 126/250 (50.40%), Postives = 171/250 (68.40%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLA S PLFS   W +EDPIS  H+ N ++   E S+   +L    P  + ++      P
Sbjct: 1   MLAFSPPLFSTFGWPWEDPIS--HEQNYIYQETEASESFLHLPSSEPQAELNYST----P 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           S+A      VS    M KKL+HNASERDRRKKINSLYSSLR+LLP++DQ KKLS P+T+S
Sbjct: 61  SAA------VSGNPTMVKKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           R+L YIPELQ+QVE  ++KKEEL++ +  Q     +EK+ K+ ++SS S +SA+RLS  E
Sbjct: 121 RVLKYIPELQKQVERLIQKKEELLSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDRE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           + +QIST       + LSE+L+ LEE+GLL++NASSFESF G++F+NLHLQ+    RME 
Sbjct: 181 IVVQIST--FKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQVEGTHRMEC 236

Query: 241 KMLSNMLLEM 251
           ++LS  LL +
Sbjct: 241 EVLSEKLLSL 236

[Close]

BLAST of CSPI04G19330 vs. TrEMBL
Match: A5C6G0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031510 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-46
Identity = 125/250 (50.00%), Postives = 170/250 (68.00%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLA S PLFS   W +EDP S  H+ N ++   E S+   +L    P  + ++      P
Sbjct: 1   MLAFSPPLFSTFGWPWEDPXS--HEQNYIYQETEASESFLHLPSSEPQAELNYST----P 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           S+A      VS    M KKL+HNASERDRRKKINSLYSSLR+LLP++DQ KKLS P+T+S
Sbjct: 61  SAA------VSGNPTMVKKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           R+L YIPELQ+QVE  ++KKEEL++ +  Q     +EK+ K+ ++SS S +SA+RLS  E
Sbjct: 121 RVLKYIPELQKQVERLIQKKEELLSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDRE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           + +QIST       + LSE+L+ LEE+GLL++NASSFESF G++F+NLHLQ+    RME 
Sbjct: 181 IVVQIST--FKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQVEGTHRMEC 236

Query: 241 KMLSNMLLEM 251
           ++LS  LL +
Sbjct: 241 EVLSEKLLSL 236

[Close]

BLAST of CSPI04G19330 vs. TrEMBL
Match: A5C2W4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027441 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.0e-42
Identity = 120/250 (48.00%), Postives = 160/250 (64.00%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLA S PLF    W  EDPIS  H  N ++   E S+   +L    P ++ +       P
Sbjct: 1   MLAFSPPLFPTLGWPLEDPIS--HAQNYIYGETETSESFLHLSSSQPQVELNCST----P 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           S+A      VS    M KKL+HNASERDRRKKINSLYSS+R+LLPS+DQ KKLS P+T+S
Sbjct: 61  SAA------VSGNPTMVKKLNHNASERDRRKKINSLYSSMRSLLPSADQXKKLSIPSTVS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           R+L YIPELQ+QVE  ++KKEE ++ +  +      E +    + SS S +SA RLS  E
Sbjct: 121 RVLKYIPELQRQVERLIQKKEEFLSKICREGDPIHLENQRNGTLGSSLSAVSARRLSDRE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           + +QIST       + LSE+L+ LEE+GLL++NASSFESF G++F+NLHLQ+     ME 
Sbjct: 181 IVVQIST--FNVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQVEGTQGMEC 236

Query: 241 KMLSNMLLEM 251
           ++LS  LL +
Sbjct: 241 ELLSEKLLSL 236

[Close]

BLAST of CSPI04G19330 vs. TrEMBL
Match: B9H8U2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s03590g PE=4 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42
Identity = 122/244 (50.00%), Postives = 161/244 (65.98%), Query Frame = 1


Query: 8   LFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYPSSAAPSP 67
           LFS   W  E+PIS H Q+ S      P   + +     PP  P+  + DH  S  A S 
Sbjct: 9   LFSTFGWPLEEPIS-HEQNYSFRDCETPGSFTHF-----PPSQPNIRELDHSTSFTAYSG 68

Query: 68  EGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIP 127
            G  N   M KKL+HNASERDRRKKINSLYSSLR+LLP+SD MKKLS P+TISR+L YIP
Sbjct: 69  SGDPN---MVKKLNHNASERDRRKKINSLYSSLRSLLPASDGMKKLSIPSTISRVLKYIP 128

Query: 128 ELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQIST 187
           ELQQQVE ++++KEEL++ +  Q+    +E + K  + SS S +SASRL   E+ +QIST
Sbjct: 129 ELQQQVERRIQRKEELLSNLSRQDDLIHQENQRKDTMYSSLSSVSASRLGDREVVVQIST 188

Query: 188 DINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQ-MGSNCRMEPKMLSNM 247
                 ++ +SEIL+ LEE GL+L+N+SSFESF G +F++LHLQ M  NC +E + L+  
Sbjct: 189 --CKVLKSPISEILLNLEENGLVLINSSSFESFGGNVFYHLHLQVMEGNCTLECEALNEK 241

Query: 248 LLEM 251
           LL +
Sbjct: 249 LLSL 241

[Close]

BLAST of CSPI04G19330 vs. TAIR10
Match: AT5G04150.1 (AT5G04150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 79/175 (45.14%), Postives = 119/175 (68.00%), Query Frame = 1


Query: 76  MAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEE 135
           + KKL+HNASERDRR+K+N+LYSSLRALLP SDQ +KLS P T++R++ YIPE +Q+++ 
Sbjct: 64  LEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQR 123

Query: 136 QMRKKEELMAAMVGQEVKNDEEKK--MKSAVSSSSSIISASRLSRHEMAIQISTDINGGQ 195
             R+KEEL+  +  +  +     K  M S  SSSS  I+A+ L+  E+A+QI+T     +
Sbjct: 124 LSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIAT----SK 183

Query: 196 RNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEPKMLSNMLL 249
              +S++L+ LEE GL +++ SS  S   +IF+ LHLQM  +C++  + L N +L
Sbjct: 184 WTSVSDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQMRGDCKVRLEELINGML 234

[Close]

BLAST of CSPI04G19330 vs. TAIR10
Match: AT2G41240.1 (AT2G41240.1 basic helix-loop-helix protein 100)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 89/226 (39.38%), Postives = 141/226 (62.39%), Query Frame = 1


Query: 37  DHSFY---------LQFPPPPLDPSHGDHDHYPSSAAPSPEGVSNVSKMAKKLSHNASER 96
           DHSFY         L FP P L  +H       + ++ +   + +   + KKL+HNASER
Sbjct: 18  DHSFYETDDVSNTFLDFPLPDLTVTH------ENVSSENNRTLLDNPVVMKKLNHNASER 77

Query: 97  DRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEEQMRKKEELMAAM 156
           +RRKKIN+++SSLR+ LP ++Q KKLS  AT+S+ L YIPELQ+QV++ M+KKEEL   +
Sbjct: 78  ERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKKEELSFQI 137

Query: 157 VGQE--VKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQISTDINGGQRNYLSEILICLE 216
            GQ   V  D+  K +  V+S +S +S++RLS  E+ +QIS+     ++     +L  +E
Sbjct: 138 SGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS--LQTEKCSFGNVLSGVE 197

Query: 217 EEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEPKMLSNMLLEMF 252
           E+GL+L+ ASS  S   ++F+++HLQ+  N ++  + L + LL ++
Sbjct: 198 EDGLVLVGASSSRSHGERLFYSMHLQI-KNGQVNSEELGDRLLYLY 234

[Close]

BLAST of CSPI04G19330 vs. TAIR10
Match: AT3G56980.1 (AT3G56980.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 6.5e-28
Identity = 95/261 (36.40%), Postives = 151/261 (57.85%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHG------ 60
           M A+  PLF    W          +++S +   +  ++  +L FP P  + ++G      
Sbjct: 1   MCALVPPLFPNFGWPSTG------EYDSYYLAGDILNNGGFLDFPVP--EETYGAVTAVT 60

Query: 61  -DHDHYPSSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKL 120
              + +  S +     + N   + KKL+HNASERDRR+KINSL+SSLR+ LP+S Q KKL
Sbjct: 61  QHQNSFGVSVSSEGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKL 120

Query: 121 SNPATISRILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISA 180
           S PAT+SR L YIPELQ+QV++ ++KKEEL+  + GQ       K+   AV++  S +SA
Sbjct: 121 SIPATVSRSLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYISTVSA 180

Query: 181 SRLSRHEMAIQISTDINGGQRNY-LSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQM 240
           +RL  +E+ +QIS   +    N+ +S +L  LEE+  +L++ SS  S   ++F+ LHLQ+
Sbjct: 181 TRLGDNEVMVQIS---SSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQV 240

Query: 241 G--SNCRMEPKMLSNMLLEMF 252
               N ++  + LS  +L ++
Sbjct: 241 EKIENYKLNCEELSQRMLYLY 250

[Close]

BLAST of CSPI04G19330 vs. TAIR10
Match: AT3G56970.1 (AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 82/210 (39.05%), Postives = 129/210 (61.43%), Query Frame = 1


Query: 24  HQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYPSSAAPSPEGVSNVSKMAKKLSHN 83
           +Q+ S +   +  ++  +L+   P         +    S +     + N   + KKL+HN
Sbjct: 18  NQYESYYGAGDNLNNGTFLELTVPQTYEVTHHQNSLGVSVSSEGNEIDNNPVVVKKLNHN 77

Query: 84  ASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATISRILSYIPELQQQVEEQMRKKEEL 143
           ASERDRRKKIN+L+SSLR+ LP+SDQ KKLS P T+S+ L YIPELQQQV+  ++KKEE+
Sbjct: 78  ASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEI 137

Query: 144 MAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQISTDINGGQRNY-LSEILI 203
           +  + GQ      +K+   AV+S  S +SA+RL  +E+ +Q+S   +    N+ +S +L 
Sbjct: 138 LVRVSGQRDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVS---SSKIHNFSISNVLG 197

Query: 204 CLEEEGLLLLNASSFESFDGKIFHNLHLQM 233
            +EE+G +L++ SS  S   ++F+ LHLQ+
Sbjct: 198 GIEEDGFVLVDVSSSRSQGERLFYTLHLQV 224

[Close]

BLAST of CSPI04G19330 vs. TAIR10
Match: AT1G71200.1 (AT1G71200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1


Query: 74  SKMAKKLSHNASERDRRKKINSLYSSLRALLP---SSDQMKKLSNPATISRILSYIPELQ 133
           S  AKK  HNA ER RR ++++ Y +L  LLP   SS   KK S P+ I  +++YIP+LQ
Sbjct: 57  SGAAKKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKKKWSAPSIIDNVITYIPKLQ 116

Query: 134 QQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHEMAIQISTDIN 193
            +V E   +K++L+            E + +     + S++     S +E  +QI   + 
Sbjct: 117 NEVGELTLRKQKLV------------ELERRGPSIRAISVLELGE-SGYEAVVQIC--LK 176

Query: 194 GGQRNYLSEILICLEEEGLLLLNASSFESFDGK--IFHNLHLQM 233
               +  S +L  +E +GL +L+AS+ +    +  + +N H++M
Sbjct: 177 KENEDEFSNLLHVMEVQGLSVLSASTSQVCREQRVVCYNFHVKM 205

[Close]

BLAST of CSPI04G19330 vs. NCBI nr
Match: gi|778694754|ref|XP_004144337.2| (PREDICTED: transcription factor bHLH100-like [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 2.0e-132
Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHG+HDHYP
Sbjct: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGEHDHYP 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS
Sbjct: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE
Sbjct: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP
Sbjct: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240

Query: 241 KMLSNMLLEMFP 253
           KMLSNMLLEMFP
Sbjct: 241 KMLSNMLLEMFP 252

[Close]

BLAST of CSPI04G19330 vs. NCBI nr
Match: gi|659111345|ref|XP_008455703.1| (PREDICTED: transcription factor bHLH100-like [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 7.7e-124
Identity = 240/252 (95.24%), Postives = 243/252 (96.43%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLAVSSPLFSPHQWQ EDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSH   DHYP
Sbjct: 1   MLAVSSPLFSPHQWQLEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSH---DHYP 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           SSAAPSPE VSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS
Sbjct: 61  SSAAPSPEAVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           RILSYIPELQQQVE QMRKKEELMAAMVGQEVKNDEEKKMKSA SSSSSIISASRLSRHE
Sbjct: 121 RILSYIPELQQQVEGQMRKKEELMAAMVGQEVKNDEEKKMKSAASSSSSIISASRLSRHE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           MAIQISTDING QRNYLSEIL CLEEEGLLLLNASSFESFDGK+FHNLHLQMGSNC+MEP
Sbjct: 181 MAIQISTDINGCQRNYLSEILCCLEEEGLLLLNASSFESFDGKVFHNLHLQMGSNCKMEP 240

Query: 241 KMLSNMLLEMFP 253
           K+LSNMLLEMFP
Sbjct: 241 KVLSNMLLEMFP 249

[Close]

BLAST of CSPI04G19330 vs. NCBI nr
Match: gi|700199566|gb|KGN54724.1| (hypothetical protein Csa_4G434480 [Cucumis sativus])

HSP 1 Score: 439.1 bits (1128), Expect = 5.2e-120
Identity = 231/236 (97.88%), Postives = 234/236 (99.15%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHG+HDHYP
Sbjct: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGEHDHYP 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS
Sbjct: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE
Sbjct: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNC 237
           MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQ+  +C
Sbjct: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQILFHC 236

[Close]

BLAST of CSPI04G19330 vs. NCBI nr
Match: gi|731400480|ref|XP_010653965.1| (PREDICTED: transcription factor ORG2 [Vitis vinifera])

HSP 1 Score: 196.8 bits (499), Expect = 4.5e-47
Identity = 126/250 (50.40%), Postives = 171/250 (68.40%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLA S PLFS   W +EDPIS  H+ N ++   E S+   +L    P  + ++      P
Sbjct: 1   MLAFSPPLFSTFGWPWEDPIS--HEQNYIYQETEASESFLHLPSSEPQAELNYST----P 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           S+A      VS    M KKL+HNASERDRRKKINSLYSSLR+LLP++DQ KKLS P+T+S
Sbjct: 61  SAA------VSGNPTMVKKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           R+L YIPELQ+QVE  ++KKEEL++ +  Q     +EK+ K+ ++SS S +SA+RLS  E
Sbjct: 121 RVLKYIPELQKQVERLIQKKEELLSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDRE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           + +QIST       + LSE+L+ LEE+GLL++NASSFESF G++F+NLHLQ+    RME 
Sbjct: 181 IVVQIST--FKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQVEGTHRMEC 236

Query: 241 KMLSNMLLEM 251
           ++LS  LL +
Sbjct: 241 EVLSEKLLSL 236

[Close]

BLAST of CSPI04G19330 vs. NCBI nr
Match: gi|147800349|emb|CAN64266.1| (hypothetical protein VITISV_031510 [Vitis vinifera])

HSP 1 Score: 194.9 bits (494), Expect = 1.7e-46
Identity = 125/250 (50.00%), Postives = 170/250 (68.00%), Query Frame = 1


Query: 1   MLAVSSPLFSPHQWQFEDPISLHHQHNSLFSPFEPSDHSFYLQFPPPPLDPSHGDHDHYP 60
           MLA S PLFS   W +EDP S  H+ N ++   E S+   +L    P  + ++      P
Sbjct: 1   MLAFSPPLFSTFGWPWEDPXS--HEQNYIYQETEASESFLHLPSSEPQAELNYST----P 60

Query: 61  SSAAPSPEGVSNVSKMAKKLSHNASERDRRKKINSLYSSLRALLPSSDQMKKLSNPATIS 120
           S+A      VS    M KKL+HNASERDRRKKINSLYSSLR+LLP++DQ KKLS P+T+S
Sbjct: 61  SAA------VSGNPTMVKKLNHNASERDRRKKINSLYSSLRSLLPAADQAKKLSIPSTVS 120

Query: 121 RILSYIPELQQQVEEQMRKKEELMAAMVGQEVKNDEEKKMKSAVSSSSSIISASRLSRHE 180
           R+L YIPELQ+QVE  ++KKEEL++ +  Q     +EK+ K+ ++SS S +SA+RLS  E
Sbjct: 121 RVLKYIPELQKQVERLIQKKEELLSKISRQGDIIHQEKQRKATLASSLSAVSANRLSDRE 180

Query: 181 MAIQISTDINGGQRNYLSEILICLEEEGLLLLNASSFESFDGKIFHNLHLQMGSNCRMEP 240
           + +QIST       + LSE+L+ LEE+GLL++NASSFESF G++F+NLHLQ+    RME 
Sbjct: 181 IVVQIST--FKVHESPLSEVLLNLEEDGLLVINASSFESFGGRVFYNLHLQVEGTHRMEC 236

Query: 241 KMLSNMLLEM 251
           ++LS  LL +
Sbjct: 241 EVLSEKLLSL 236

The following BLAST results are available for this feature:

BLAST of CSPI04G19330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH101_ARATH	1.8e-27	45.14	Transcription factor bHLH101 OS=Arabidopsis thaliana GN=BHLH101 PE=2 SV=1	[more]
BH100_ARATH	3.0e-27	39.38	Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100 PE=2 SV=1	[more]
ORG3_ARATH	1.1e-26	36.40	Transcription factor ORG3 OS=Arabidopsis thaliana GN=ORG3 PE=1 SV=1	[more]
ORG2_ARATH	4.4e-26	39.05	Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1	[more]

BLAST of CSPI04G19330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Z2_CUCSA	3.6e-120	97.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G434480 PE=4 SV=1	[more]
D7TIN8_VITVI	3.1e-47	50.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05300 PE=4 SV=...	[more]
A5C6G0_VITVI	1.2e-46	50.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031510 PE=4 SV=1	[more]
A5C2W4_VITVI	1.0e-42	48.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027441 PE=4 SV=1	[more]
B9H8U2_POPTR	1.8e-42	50.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s03590g PE=4 SV=2	[more]

BLAST of CSPI04G19330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G04150.1	1.0e-28	45.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41240.1	1.7e-28	39.38	basic helix-loop-helix protein 100	[more]
AT3G56980.1	6.5e-28	36.40	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56970.1	2.5e-27	39.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G71200.1	1.4e-06	29.88	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CSPI04G19330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694754\|ref\|XP_004144337.2\|	2.0e-132	99.60	PREDICTED: transcription factor bHLH100-like [Cucumis sativus]	[more]
gi\|659111345\|ref\|XP_008455703.1\|	7.7e-124	95.24	PREDICTED: transcription factor bHLH100-like [Cucumis melo]	[more]
gi\|700199566\|gb\|KGN54724.1\|	5.2e-120	97.88	hypothetical protein Csa_4G434480 [Cucumis sativus]	[more]
gi\|731400480\|ref\|XP_010653965.1\|	4.5e-47	50.40	PREDICTED: transcription factor ORG2 [Vitis vinifera]	[more]
gi\|147800349\|emb\|CAN64266.1\|	1.7e-46	50.00	hypothetical protein VITISV_031510 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR015660	MASH1/Ascl1a-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G19330.1	CSPI04G19330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 78..145 score: 1.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 78..130 score: 1.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 83..135 score: 2.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 77..129 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 77..147 score: 2.36
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 70..250 score: 8.6
None	No IPR available	unknown	Coil	Coil	coord: 126..146 scor
None	No IPR available	PANTHER	PTHR13935:SF41	ACHAETE-SCUTE HOMOLOG 3	coord: 70..250 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G19330	Cla001652	Watermelon (97103) v1	cpiwmB341
CSPI04G19330	Csa4G434480	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G19330	MELO3C019065	Melon (DHL92) v3.5.1	cpimeB331
CSPI04G19330	Lsi01G017850	Bottle gourd (USVL1VR-Ls)	cpilsiB248
CSPI04G19330	MELO3C019064.2	Melon (DHL92) v3.6.1	cpimedB323
CSPI04G19330	CsaV3_4G029740	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G19330	CmaCh03G001310	Cucurbita maxima (Rimu)	cmacpiB678
CSPI04G19330	CmoCh03G001660	Cucurbita moschata (Rifu)	cmocpiB664
CSPI04G19330	Cp4.1LG10g11050	Cucurbita pepo (Zucchini)	cpecpiB078
CSPI04G19330	CsGy4G018230	Cucumber (Gy14) v2	cgybcpiB170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G19330	Wax gourd	cpiwgoB409
CSPI04G19330	Cucumber (Gy14) v1	cgycpiB063