CSPI04G17070 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G17070
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transposon Ty3-G Gag-Pol polyprotein
Location	Chr4 : 14489561 .. 14491089 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTATCAGAGCCGTGATTCTGGCCAAGGAGAAAGATGGTGCAGACGAGGCTTGAAGAAAAGATCGCAACGATAGATCAAGAGCTTCACGGCATTAAGAAGGAGATCGGAAAACTGCAGGCAATGGAGAAAACGTTAATGGAAATCTCGAAGAATATGGAAAGGCAGAATCAAGTAATGTTGAGAATTATGGAGTCAGCCGCACAAGAAAGATCAACGATGAATGAGAGGATATCCGAACTGTCTATGCGGACTTTTTTGGCGAAGACGAACGATGAGGGCGAAGGATCATCGAGGCGAGAAGACGAAACGAAAAACGAAGAGAAGAAACCGAATGACGAAGGGAACCATGACCGAAACAAATTCAAGAAGGTGGAGATGCCGATATTCAACGGAGAGGATCCCGATTTGTGGTTGTTTCGCGCTGAGAGGTATTTTCGCATCCATAAACTCACTGAATCTGAGAAGATGACAGTTTCTACGATAAGTTTCGAAGGACCAGCACTGAACTGGTTTCGTTCTCAAGAGGAACGGGAGAAGTTTATTGATTGGGCGAATATGAAGGAAAGGTTGTTGGAGAGGTTCCGTTCATCGAGGGAAGGATCTCTGTACGGACGATTTTTGCGTATCCAACAAACGACAACTGTGGATGAATATCGAAATTTATTCGATAAGTGGGTGGCGCCACTAACTGATTTACCCGAAAAAGTAGTGGAAGAGACGTTTGTTTCGGGATTGAAGCCGTGGATCCAAGCTGAGATGGATTTTTGCGAACCGAAAGGCCTGGCTCATATGATGAAGATAGTGCAAAAGATTGAAAACAGAGAAGATATTCGCGTGAGGCAAATCTTCCTGGATATTCTGGAGGAAAAACGACCAATCCACAGAATATTATTAAGGCTAACGCGAATTCGAGAGCTGGAGAAACTAAGGGTGGTACAAGTTGGCCAATGAGAACCATTACTCTTCGCGGAACATCAAAGGAGGAAGCGCCAAAAGAAGGACCATCAAAACGTTTATCTGATGCGGAATTCCAAGCTCGAAAGGAGAAAGGGTTGTGTTTTCGGTGCAATGAGAAATATTCTCATGATCATAAATGCAAAACTAAGGAGTTGAGAGAACTGTGGATGCTGGTAATTAGTGGGGATGATGAAGAGTATGAAATTATTGAGGAAGGAGAGGAAACAATGAAGGAGCTGAAGTCTATTGAAATATTGGAAGAAAACCAGGCGATAGTAGAGTTATCTATCAACTCTGTGGTTGGATTATCTAACCCAGGGACGATGAAGGTTAAGGGAAAGATACAAGAGAAGGGAGTGGTGGTGTTGATTGATTGTGGAGCAACACACAACTTTATTTCTGAAATTCTTGTGAAGGAATTACAACTAGAAACAAAAGAAACCTTAAACTATGGGGTAATTTTGGGCTCCGGTACTGCTGTAAAAGGGAAGGGGATATGTGAAGCTATGGAATTAATGATAGGAGAATGGAAAGTGATCAATGAATTCTTACCATTGGAAGGGGAGTAG

mRNA sequence

ATGGTGCAGACGAGGCTTGAAGAAAAGATCGCAACGATAGATCAAGAGCTTCACGGCATTAAGAAGGAGATCGGAAAACTGCAGGCAATGGAGAAAACGTTAATGGAAATCTCGAAGAATATGGAAAGGCAGAATCAAGTAATGTTGAGAATTATGGAGTCAGCCGCACAAGAAAGATCAACGATGAATGAGAGGATATCCGAACTGTCTATGCGGACTTTTTTGGCGAAGACGAACGATGAGGGCGAAGGATCATCGAGGCGAGAAGACGAAACGAAAAACGAAGAGAAGAAACCGAATGACGAAGGGAACCATGACCGAAACAAATTCAAGAAGGTGGAGATGCCGATATTCAACGGAGAGGATCCCGATTTGTGGTTGTTTCGCGCTGAGAGGTATTTTCGCATCCATAAACTCACTGAATCTGAGAAGATGACAGTTTCTACGATAAGTTTCGAAGGACCAGCACTGAACTGGTTTCGTTCTCAAGAGGAACGGGAGAAGTTTATTGATTGGGCGAATATGAAGGAAAGGTTGTTGGAGAGGTTCCGTTCATCGAGGGAAGGATCTCTGTACGGACGATTTTTGCGTATCCAACAAACGACAACTGTGGATGAATATCGAAATTTATTCGATAAGTGGGTGGCGCCACTAACTGATTTACCCGAAAAAGTAGTGGAAGAGACGTTTGTTTCGGGATTGAAGCCGTGGATCCAAGCTGAGATGGATTTTTGCGAACCGAAAGGCCTGGCTCATATGATGAAGATAGTGCAAAAGATTGAAAACAGAGAAGATATTCGCAATATTATTAAGGCTAACGCGAATTCGAGAGCTGGAGAAACTAAGGGTGGTACAAGTTGGCCAATGAGAACCATTACTCTTCGCGGAACATCAAAGGAGGAAGCGCCAAAAGAAGGACCATCAAAACGTTTATCTGATGCGGAATTCCAAGCTCGAAAGGAGAAAGGGTTGTGTTTTCGGTGCAATGAGAAATATTCTCATGATCATAAATGCAAAACTAAGGAGTTGAGAGAACTGTGGATGCTGGTAATTAGTGGGGATGATGAAGAGTATGAAATTATTGAGGAAGGAGAGGAAACAATGAAGGAGCTGAAGTCTATTGAAATATTGGAAGAAAACCAGGCGATAGTAGAGTTATCTATCAACTCTGTGGTTGGATTATCTAACCCAGGGACGATGAAGGTTAAGGGAAAGATACAAGAGAAGGGAGTGGTGGTGTTGATTGATTGTGGAGCAACACACAACTTTATTTCTGAAATTCTTGTGAAGGAATTACAACTAGAAACAAAAGAAACCTTAAACTATGGGGTAATTTTGGGCTCCGGTACTGCTGTAAAAGGGAAGGGGATATGTGAAGCTATGGAATTAATGATAGGAGAATGGAAAGTGATCAATGAATTCTTACCATTGGAAGGGGAGTAG

Coding sequence (CDS)

ATGGTGCAGACGAGGCTTGAAGAAAAGATCGCAACGATAGATCAAGAGCTTCACGGCATTAAGAAGGAGATCGGAAAACTGCAGGCAATGGAGAAAACGTTAATGGAAATCTCGAAGAATATGGAAAGGCAGAATCAAGTAATGTTGAGAATTATGGAGTCAGCCGCACAAGAAAGATCAACGATGAATGAGAGGATATCCGAACTGTCTATGCGGACTTTTTTGGCGAAGACGAACGATGAGGGCGAAGGATCATCGAGGCGAGAAGACGAAACGAAAAACGAAGAGAAGAAACCGAATGACGAAGGGAACCATGACCGAAACAAATTCAAGAAGGTGGAGATGCCGATATTCAACGGAGAGGATCCCGATTTGTGGTTGTTTCGCGCTGAGAGGTATTTTCGCATCCATAAACTCACTGAATCTGAGAAGATGACAGTTTCTACGATAAGTTTCGAAGGACCAGCACTGAACTGGTTTCGTTCTCAAGAGGAACGGGAGAAGTTTATTGATTGGGCGAATATGAAGGAAAGGTTGTTGGAGAGGTTCCGTTCATCGAGGGAAGGATCTCTGTACGGACGATTTTTGCGTATCCAACAAACGACAACTGTGGATGAATATCGAAATTTATTCGATAAGTGGGTGGCGCCACTAACTGATTTACCCGAAAAAGTAGTGGAAGAGACGTTTGTTTCGGGATTGAAGCCGTGGATCCAAGCTGAGATGGATTTTTGCGAACCGAAAGGCCTGGCTCATATGATGAAGATAGTGCAAAAGATTGAAAACAGAGAAGATATTCGCAATATTATTAAGGCTAACGCGAATTCGAGAGCTGGAGAAACTAAGGGTGGTACAAGTTGGCCAATGAGAACCATTACTCTTCGCGGAACATCAAAGGAGGAAGCGCCAAAAGAAGGACCATCAAAACGTTTATCTGATGCGGAATTCCAAGCTCGAAAGGAGAAAGGGTTGTGTTTTCGGTGCAATGAGAAATATTCTCATGATCATAAATGCAAAACTAAGGAGTTGAGAGAACTGTGGATGCTGGTAATTAGTGGGGATGATGAAGAGTATGAAATTATTGAGGAAGGAGAGGAAACAATGAAGGAGCTGAAGTCTATTGAAATATTGGAAGAAAACCAGGCGATAGTAGAGTTATCTATCAACTCTGTGGTTGGATTATCTAACCCAGGGACGATGAAGGTTAAGGGAAAGATACAAGAGAAGGGAGTGGTGGTGTTGATTGATTGTGGAGCAACACACAACTTTATTTCTGAAATTCTTGTGAAGGAATTACAACTAGAAACAAAAGAAACCTTAAACTATGGGGTAATTTTGGGCTCCGGTACTGCTGTAAAAGGGAAGGGGATATGTGAAGCTATGGAATTAATGATAGGAGAATGGAAAGTGATCAATGAATTCTTACCATTGGAAGGGGAGTAG

Homology

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BLAST of CSPI04G17070 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.3e-74
Identity = 185/487 (37.99%), Postives = 279/487 (57.29%), Query Frame = 1


Query: 1    MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNMERQNQVMLRIMESAAQERS 60
            M Q R E ++  +++E+  I++E+ +L  MEKT +E     E Q  V       AA    
Sbjct: 680  MAQKRNEGRVDCLEKEVGEIREEMQRLPRMEKTSLE-----ETQKAV-------AALSLG 739

Query: 61   TMNERISELSMRTFLAKTNDEGEGSSRREDETKNEEKKPNDEGNHDRNKFKKVEMPIFNG 120
                  ++   R        E  G     DE +         GN +    ++VEMP+F G
Sbjct: 740  RNTTTAAQREDRAGWIPGVWEPSGGGMASDEMRRG-------GNGEWRGSRRVEMPVFTG 799

Query: 121  EDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWANMKERLL 180
            E+PD W+FRA+RYF  + LTE EK+  + +S +G AL+W++  + RE F  W N+K RLL
Sbjct: 800  ENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLL 859

Query: 181  ERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSGLKPWIQA 240
             RFR ++EGSL  +FL ++Q  TV  Y   F+    PL  + E+V+E TF++GL P I+A
Sbjct: 860  LRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRA 919

Query: 241  EMDFCEPKGLAHMMKIVQKIENRE---------DIRNIIKANANSRAGETKGGTSWPMRT 300
            E    +P GL H+M++ Q++E+R          +     K  + +  GE K G ++  R 
Sbjct: 920  EQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENFQTRA 979

Query: 301  ITLRGTSKEEAPKEGPSKRLSDAEFQARKEKGLCFRCNEKYSHDHKCKTKELRELWMLVI 360
            + + G       +E P KRL+++E QAR+EKGL F+C EK+S  H+CK KELR    +++
Sbjct: 980  VAV-GEKTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCK-KELR----VLL 1039

Query: 361  SGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGV 420
              +DEE +  +  +   +E   IE+ +     VELS+NSVVGL+ PGTMK+KG I  K V
Sbjct: 1040 VHEDEEEDDNQFDDRATEEPALIELKD----AVELSLNSVVGLTTPGTMKIKGTIGSKEV 1099

Query: 421  VVLIDCGATHNFISEILVKELQLETKETLNYGVILGSGTAVKGKGICEAMELMIGEWKVI 479
            ++L+D GATHNF+S  LV++L L    T +YGV++G+G +VKGKGIC  + + +    V+
Sbjct: 1100 IILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVV 1137

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BLAST of CSPI04G17070 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.8e-59
Identity = 169/501 (33.73%), Postives = 259/501 (51.70%), Query Frame = 1


Query: 1   MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNMERQNQVMLRIMESAAQERS 60
           M Q  +E+++   + E+  IK+E+ +L  +EK       N+E+ + ++  I E   ++R 
Sbjct: 1   MTQKMIEDRLTASEAEIEAIKQEVQRLPLLEK-------NLEKMHAMLSVIYED--RQRQ 60

Query: 61  TMNERISELSMRTFLAKTNDEGEGSSRREDETKNEEKKPNDEGNHDRNKFKKVEMPIFNG 120
           T   +++ +S      K     E  +  E E          E    R KF+K+EMP+FN 
Sbjct: 61  TGGSKLTGIST----GKRKVRNEEVTEEEGEEGETSLSVETEAGQKRFKFRKLEMPVFN- 120

Query: 121 EDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWANMKERLL 180
                                        +S EG  +NWFR  E R+ F  W  +KER+ 
Sbjct: 121 ----------------------------VVSLEGRGMNWFRWAENRKWFRSWKELKERMY 180

Query: 181 ERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSGLKPWIQA 240
            RFR    G+   RFL I+Q  +V EY   F++  APL ++ E+V+E TF +GL P I+ 
Sbjct: 181 NRFRCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRK 240

Query: 241 EMDFCEPKGLAHMMKIVQKIENREDIRN-------IIKANANSRAGET-KGGTSWPMRTI 300
           E+      GL  +M+  Q  E + ++           K  A +  G + K   S P + +
Sbjct: 241 EVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEAAKTNLGSSPKTFGSPPTKMV 300

Query: 301 TL----------RGTSKEE-----APKEGPSKRLSDAEFQARKEKGLCFRCNEKYSHDHK 360
           TL            TS+         +E   +R  D++ QARKEKGLC+RC++ +S  H+
Sbjct: 301 TLAKKVVNQTSNSNTSQSHTVGGGGRREPSYRRWIDSKLQARKEKGLCYRCDKPFSKGHR 360

Query: 361 CKTKELRELWMLVISGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSINSVVGLSNP 420
           CK +EL+   + V++ D  + E+ EE  +          + E   IVELS++SVVGL+ P
Sbjct: 361 CKNRELK---LCVVADDLIDTEMSEEDNDGG--------MVEIGPIVELSLSSVVGLTAP 420

Query: 421 GTMKVKGKIQEKGVVVLIDCGATHNFISEILVKELQLETKETLNYGVILGSGTAVKGKGI 479
           GT K+KGK++++ VVV+IDCGATHNFIS  LV+E+Q+ T ET  YGVI+GSG AV+GKG+
Sbjct: 421 GTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGVIMGSGKAVQGKGM 448

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BLAST of CSPI04G17070 vs. TrEMBL
Match: J3SDF5_BETVU (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 142/398 (35.68%), Postives = 216/398 (54.27%), Query Frame = 1


Query: 109 KFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREK 168
           + KK++MP F+  DPD W+ R ER+F  + LT++EKM  + ++ EG AL W++ + +R  
Sbjct: 173 RHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRRP 232

Query: 169 FIDWANMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEE 228
           F +W +MK  +L +FR    GSL+ ++L   QT +V EYR  F +  APL  +PE+++  
Sbjct: 233 FRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMG 292

Query: 229 TFVSGLKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIRNIIKA--------------NA 288
            F+ GL P +Q+E+    P  L   M++  K+E R  +    +               N+
Sbjct: 293 KFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNS 352

Query: 289 N--------SRAGETKGGTSWPMRTITLRGTSKEEAPKE------GPSKRLSDAEFQARK 348
           N        S+ G      SW + +   + +     P        G  +RL++ E Q ++
Sbjct: 353 NPSLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKR 412

Query: 349 EKGLCFRCNEKYSHDHKCKTKELRELWMLVISGDDEEYEIIEEGEETMKELKSIEILEEN 408
            KGLCF+C+EK+   H+C+ KEL  L+M     D+EE E+  EG  +  E       E  
Sbjct: 413 AKGLCFKCDEKWGVGHQCRRKELSVLFM----EDNEEDEL--EGALSGSEAPPSPTEEIP 472

Query: 409 QAIVELSINSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILVKELQLETKETL 468
               E+S+NSV+GLSNP TMK+ G I    VVV+ID GATHNF+S   + +L +   E+ 
Sbjct: 473 P---EVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESE 532

Query: 469 NYGVILGSGTAVKGKGICEAMELMI-GEWKVINEFLPL 478
            +GV LG G AV+G GIC A+ L + G   V+ +FLPL
Sbjct: 533 EFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPL 561

[Close]

BLAST of CSPI04G17070 vs. TrEMBL
Match: E5GC35_CUCME (Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.3e-54
Identity = 152/480 (31.67%), Postives = 245/480 (51.04%), Query Frame = 1


Query: 1   MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNMERQNQVMLRIMESAAQERS 60
           M+Q  ++E +   + E+  IKKE+ ++  +EKT       ME+ + ++  + E    +R 
Sbjct: 1   MMQKLIKECLDASEAEIEAIKKEVQRIPVLEKT-------MEKMHAMLTEMYEDC--QRQ 60

Query: 61  TMNERISELSMRTFLAKTNDEGEGSSRREDETKNEEKKPNDEGNHDRNKFKKVEMPIFNG 120
                ++ +S      +T D  +G    E     E          DR KFKK+EMP+FNG
Sbjct: 61  PGGFELTRVSTGKRKIRTEDLVDGDEEGETSLSLEPG-----AGQDRIKFKKLEMPVFNG 120

Query: 121 EDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWANMKERLL 180
           EDPD W+++AE YF++H L E EK+ ++ +S EG  L WFR  E R++F  W  +KER+ 
Sbjct: 121 EDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRKRFRSWKELKERMY 180

Query: 181 ERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSGLKPWIQA 240
            RF +   G+   RFL I+   +V EY   F++   PL ++ E V+  TF  GL P I+ 
Sbjct: 181 NRFCNREYGTGCARFLAIKHEGSVGEYLQRFEELSTPLPEMAEDVLVGTFTKGLDPVIRT 240

Query: 241 EMDFCEPKGLAHMMKIVQKIENREDIRNIIKANANSRAGETKGGTSWPMRTITLRGTSKE 300
           E+      GL  M+ + +  E + +   I +A+ +  A + K       +   +  T   
Sbjct: 241 EVFAMRVVGLEDMVDVARLAEEKLE---IARASHSPYAKDGKPAQKHAPKNSEIPSTKIV 300

Query: 301 EAPKEGPS--KRLSDAEFQARKEKGLCFRCNEKYSHDHKCKTKELRELWMLVISGDDEEY 360
              +  P+   + S+ +  A    G    C       H  K  EL ++ M+         
Sbjct: 301 TLAERIPTSLNQASNPQNGATGMGGRILNCK------HDVKRDELEDVEMV--------- 360

Query: 361 EIIEEGEETMKELKSIEILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGVVVLIDCG 420
           +   EGE           + E   +VELS+N VVGL+ PGT K+KG+++++ +V+++DCG
Sbjct: 361 DSTHEGE-----------MVEVSPMVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCG 420

Query: 421 ATHNFISEILVKELQLETKETLNYGVILGSGTAVKGKGICEAMELMIGEWKVINEFLPLE 479
           ATHNFIS  LV+ L L      NYGVI+GS  AV+G+ +C+ + + +    ++ +FLPLE
Sbjct: 421 ATHNFISLKLVESLNLPMAAITNYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLE 437

[Close]

BLAST of CSPI04G17070 vs. TrEMBL
Match: W9R4P8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024737 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.1e-52
Identity = 130/410 (31.71%), Postives = 226/410 (55.12%), Query Frame = 1


Query: 97  KKPNDEGNHDRNKFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPA 156
           + P    N   ++ KK+E+P+  GEDP  W+FRAE YF ++ + E EK+  ++I  EG A
Sbjct: 135 RSPERVQNRGEHRGKKLELPLSRGEDPHGWIFRAECYFTVNDVDEDEKILAASICMEGRA 194

Query: 157 LNWFRSQEEREKFIDWANMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVA 216
           L+W++  + +E F +W  ++  +L+RF  S+EG    R + ++Q  TV EY   F+   A
Sbjct: 195 LSWYQWPDSQEPFEEWQELRAAILQRFSLSQEGDPTKRLMALRQGGTVAEYWEGFEALAA 254

Query: 217 PLTDLPEKVVEETFVSGLKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIRNIIKANANS 276
            L+ +PEKV    F++GL+  I+ E+    P GL   M + Q++E+R ++ + ++     
Sbjct: 255 TLSGIPEKVYRSAFLNGLREDIRVEVKMHRPIGLPETMDLAQQVEDRLEVVDRVRKGWAG 314

Query: 277 RAGET-----KGGTSWPMRTITLRGTSKEEAPKEGPS----------------------K 336
           R+         G  + P  +    G+ + + P + P+                      +
Sbjct: 315 RSNRVDCWSKPGYNNSPSCSDIPEGSLRSQTPCDPPTAPRHQEAPGGAVGGTANGGSSFR 374

Query: 337 RLSDAEFQARKEKGLCFRCNEKYSHDHKCKTKELRELWMLVISGDDEEYEIIEEGEETMK 396
           RLS  E Q ++ +GLCFRC+E++S  H+CK   LR+L +L++SG+D + E  E+  E   
Sbjct: 375 RLSYEEIQQKRARGLCFRCDEEFSPGHRCK---LRQLQVLLVSGEDSDRE--EDLREESA 434

Query: 397 ELKSIEILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILV 456
           E  +++  E  +  V+LS+NS+ G ++  TMK++G I ++ VV+L+D G +H+FI   LV
Sbjct: 435 EAATVQ-GETTKGNVDLSLNSLWGFASAKTMKLRGTIGDREVVMLVDSGVSHSFILAELV 494

Query: 457 KELQLETKETLNYGVILGSGTAVKGKGICEAMELMI-GEWKVINEFLPLE 479
           + L L T  ++ + + +G+    + KG+C  + + I G W VI +F P E
Sbjct: 495 RTLALPTDLSVRHKIQVGNDMNFQQKGVCRGVRIHIQGHW-VIEDFFPFE 537

[Close]

BLAST of CSPI04G17070 vs. TAIR10
Match: AT1G67020.1 (AT1G67020.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-09
Identity = 41/158 (25.95%), Postives = 74/158 (46.84%), Query Frame = 1


Query: 26  KLQAMEKTLMEISKNMERQNQVMLRIMESAAQERSTMNERISELSMRTFLAKTNDEGEGS 85
           KL++M+  L ++   +ER        ME    +R    E   +    +F +     G G 
Sbjct: 44  KLESMDSVLRQVVATLER--------MEIREGKRVEQGEHSCQSPRHSFSSSMPQRGAGE 103

Query: 86  SRREDETKNEEKKPNDEGNHDRNKFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKM 145
           S    + ++             +  +++EMP+F+G     W  + ER+FR+ +  +S+K+
Sbjct: 104 SPILLDNRS-------------SLIRRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKL 163

Query: 146 TVSTISFEGPALNWFRSQEEREKFIDWANMKERLLERF 184
            +  +S EG AL WF  +    +F DW + ++RLL RF
Sbjct: 164 DLVALSLEGVALKWFLREMSTLEFRDWNSFEQRLLARF 180

[Close]

BLAST of CSPI04G17070 vs. TAIR10
Match: AT3G42723.1 (AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-07
Identity = 37/171 (21.64%), Postives = 72/171 (42.11%), Query Frame = 1


Query: 131 ERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWANMKERLLERFRSSREGS 190
           E YF  + + E E++ +   + EG    W +   ++     W   K  +    +++ + +
Sbjct: 279 ENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKCMMARETKTTMKVN 338

Query: 191 LYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSGLKPWIQAEMDFCEPKGL 250
               +  IQQ  +V EYR  F+        LP + +E  F+ GL+P +Q  +   +P G+
Sbjct: 339 HQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGI 398

Query: 251 AHMMKIVQKIENREDIRNIIKANANSRAGETKGGTSWPMRTITLRGTSKEE 302
             MM   Q +E    +       +     +    T   +R++ L G  +E+
Sbjct: 399 VQMMDTAQWLEESNSLMVYGSGLSVQTEPKVYPTTQAELRSMVLMGYMRED 449

[Close]

BLAST of CSPI04G17070 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 1


Query: 376 ILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILVKELQLE 435
           +LE+ + I ++   S    +    M+  G I    VVV+ID GAT+NFIS+ L   L+L 
Sbjct: 260 LLEDFKTIRQVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLP 319

Query: 436 TKETLNYGVILGSGTAVKGKGICEAMELMIGEWKVINEFLPLE 479
           T  T    V+LG    ++  G C  + L++ E ++   FL L+
Sbjct: 320 TSTTNQASVLLGQRQCIQTIGTCFGINLLVQEVEINENFLLLD 362

[Close]

BLAST of CSPI04G17070 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo])

HSP 1 Score: 534.3 bits (1375), Expect = 2.3e-148
Identity = 282/510 (55.29%), Postives = 377/510 (73.92%), Query Frame = 1


Query: 1   MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNM-------ERQNQVMLRIME 60
           MVQTR+EE++  IDQE+ G+KKE+ K+  +E +L EI+K++       E+Q Q++  I+E
Sbjct: 1   MVQTRIEERLECIDQEIAGMKKELSKVPVIEVSLNEIAKSVDLMRLQSEKQQQLLFTIIE 60

Query: 61  SAAQERSTMNERISELSMRTFLAKTNDEGEGSSRREDETK-------NEEKKPNDEGNHD 120
           ++++ERS M+ + +E +++ F      E + SS R  E+        +E +  +D+   D
Sbjct: 61  TSSKERSMMSGQATEPTVKEFEKAKGKESDASSSRMIESDRNFRADGSERRNDSDDSFPD 120

Query: 121 RNKFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEER 180
           RNKFKK+EMPIF GEDPD WLFRAERYF+IH+LTESEK+ VST+SF+GPALNW+RSQEER
Sbjct: 121 RNKFKKIEMPIFTGEDPDSWLFRAERYFQIHRLTESEKLLVSTVSFDGPALNWYRSQEER 180

Query: 181 EKFIDWANMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVV 240
           +KF  W+NMKERLL RFRS+++G+L G+FLRI+Q +TV+EY NLFDK VAP+ DLPE+V+
Sbjct: 181 DKFTSWSNMKERLLVRFRSNKDGTLSGQFLRIKQESTVEEYINLFDKMVAPVNDLPERVI 240

Query: 241 EETFVSGLKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIRNIIKANANSR--------- 300
           E+TF++GL PW+++E+ F  PKGLA MM++ Q +ENRE +R   K N  S          
Sbjct: 241 EDTFMNGLLPWVRSEVVFYRPKGLAEMMEVAQMVENREIVRTEAKLNGYSGGRMTGQIGS 300

Query: 301 ---------AGETKGGTSWPMRTITLRGTSKEEAPKEGPSKRLSDAEFQARKEKGLCFRC 360
                    AGE+K  TS+P+RTITLR ++  E  +EG  KRL DAEFQARKEKGLCFRC
Sbjct: 301 NRKATSGGVAGESKSNTSFPIRTITLRSSAPTENRREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 361 NEKYSHDHKCKTKELRELWMLVISGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSI 420
           NEKYS DHKC+ KE REL M V++   EEYEI+EE E+  KEL  IE+ E+   +VELSI
Sbjct: 361 NEKYSADHKCRLKEQRELRMFVVTEGREEYEIVEE-EKEEKELGRIEVNEDITTVVELSI 420

Query: 421 NSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILVKELQLETKETLNYGVILGS 479
           NSVVGL++PGTMKV+GK+  + V++LIDCGATHNF+SE LVK+L L  KET +YGVILGS
Sbjct: 421 NSVVGLNDPGTMKVRGKLLGEEVIILIDCGATHNFVSEKLVKKLILPIKETSHYGVILGS 480

[Close]

BLAST of CSPI04G17070 vs. NCBI nr
Match: gi|659109397|ref|XP_008454696.1| (PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 1.1e-134
Identity = 265/483 (54.87%), Postives = 348/483 (72.05%), Query Frame = 1


Query: 1   MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNME-------RQNQVMLRIME 60
           MVQTR+EE++  IDQE+ G+KKE+ K+ A+E +L EI+K++E       +Q Q++  I+E
Sbjct: 1   MVQTRIEERLECIDQEIAGMKKELSKVPAIEMSLSEIAKSLELMRLQSEKQQQLLFTIIE 60

Query: 61  SAAQERSTMNERISELSMRTFLAKTNDEGEGSSRREDET-------KNEEKKPNDEGNHD 120
           + ++ERSTM+   +E   + F      E + SS +  ++       +N+ +   D+G  D
Sbjct: 61  TNSKERSTMSRLETESPAKEFEKMKGKEDDASSSKAIDSGRNFGADRNDRRIDGDDGVSD 120

Query: 121 RNKFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEER 180
           RNKFKK+EMP+F GEDPD WLFRAERYF+IHKLT+SEKM VSTISF+GPALNWFRSQEER
Sbjct: 121 RNKFKKIEMPVFTGEDPDSWLFRAERYFQIHKLTDSEKMLVSTISFDGPALNWFRSQEER 180

Query: 181 EKFIDWANMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVV 240
           +KF  W+NMKERLL RFRS+++G+L G+FLRI+Q  TV+EY NLFDK VAP+ DLPE+V+
Sbjct: 181 DKFTSWSNMKERLLIRFRSNKDGTLSGQFLRIKQEGTVEEYINLFDKMVAPVNDLPERVI 240

Query: 241 EETFVSGLKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIR-----------------NI 300
            +TF++GL PW+++E+ FC PK LA MM+  Q +ENRE  R                 N+
Sbjct: 241 LDTFMNGLLPWVRSEVFFCRPKSLAEMMEAAQMVENREIARIEAKMSGYSGGKITAYNNV 300

Query: 301 I-KANANSRAGETKGGTSWPMRTITLRGTSKEEAPKEGPSKRLSDAEFQARKEKGLCFRC 360
             K +    AG+ K  T +P+RTITLR +   E  +EG  KRL DAEFQARKEKGLCFRC
Sbjct: 301 AGKTSTGGVAGDNKNNTVFPIRTITLRSSVPNENQREGTYKRLPDAEFQARKEKGLCFRC 360

Query: 361 NEKYSHDHKCKTKELRELWMLVISGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSI 420
           NEKYS DHKC+ +E REL M V++ + +EYEI+EE E   +EL  IE+ E+   +VELSI
Sbjct: 361 NEKYSADHKCRLREQRELRMFVVTAERDEYEIVEE-ENERRELSCIELKEDVTTVVELSI 420

Query: 421 NSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILVKELQLETKETLNYGVILGS 452
           NSVVGL++PGTMKV+GK+  + VV+LIDCGATHNF+SE LVK+L L  KET +YGVILGS
Sbjct: 421 NSVVGLNDPGTMKVRGKLFGEEVVILIDCGATHNFVSEKLVKKLSLPIKETSHYGVILGS 480

[Close]

BLAST of CSPI04G17070 vs. NCBI nr
Match: gi|659134102|ref|XP_008467029.1| (PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 8.9e-121
Identity = 239/434 (55.07%), Postives = 309/434 (71.20%), Query Frame = 1


Query: 1   MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNM-------ERQNQVMLRIME 60
           MVQTR+EE++ + +QE+ GIKKE+ K+  +E TL+E+++NM       E+Q Q +L  ME
Sbjct: 1   MVQTRIEERMESFEQEVAGIKKELAKMPVIESTLIELTRNMEMMRLQSEKQQQAILSYME 60

Query: 61  SAAQERSTMNERISELSMRTFLAKTNDEGEGSSRREDETKNEEKKPNDEGNHDRNKFKKV 120
             A+ERS   ER++E   +      +   + SS R+ E  N +K   DE ++DR+KFKKV
Sbjct: 61  MNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVEEINTKKNEPDENSNDRSKFKKV 120

Query: 121 EMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWA 180
           EMP+F GEDP+ WLFRAERYF+IHKLTESEKM VSTI F+GPALNW+R+QEEREKF+ W 
Sbjct: 121 EMPVFTGEDPESWLFRAERYFQIHKLTESEKMLVSTICFDGPALNWYRAQEEREKFVSWT 180

Query: 181 NMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSG 240
           N+KERLL RF+S+REG+ +GRFLRIQQ TTV+EYRNLFDK VAPL+D+ ++VVEETF+SG
Sbjct: 181 NLKERLLIRFQSTREGTAFGRFLRIQQETTVEEYRNLFDKLVAPLSDVEDRVVEETFMSG 240

Query: 241 LKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIRNIIKANANSRAG-------------- 300
           L PWI+AE+  C PKGLA MM+  Q +E+RE +RN   AN N   G              
Sbjct: 241 LFPWIRAEVILCRPKGLAEMMRTAQLVEDREVLRN--AANLNGYIGGKSSTPTSTGTKHY 300

Query: 301 ------ETKGGTSWPMRTITLRGTSKEEAPKEGPSKRLSDAEFQARKEKGLCFRCNEKYS 360
                 E K    +P+RTITL+  +  E  KEG SKRL DAEFQ R+EKGLCF+CNEKYS
Sbjct: 301 YHQQNKENKANAPFPIRTITLKSPNSGETRKEGTSKRLPDAEFQLRREKGLCFKCNEKYS 360

Query: 361 HDHKCKTKELRELWMLVISGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSINSVVG 408
            DHKCK +E REL M V+  ++EE EI+EE E    EL+++E+  +  A VELSINSVVG
Sbjct: 361 ADHKCKMREQRELRMFVVKDNNEELEIVEETETDTAELRTVEVRPQATACVELSINSVVG 420

[Close]

BLAST of CSPI04G17070 vs. NCBI nr
Match: gi|147854459|emb|CAN78588.1| (hypothetical protein VITISV_043911 [Vitis vinifera])

HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74
Identity = 185/487 (37.99%), Postives = 279/487 (57.29%), Query Frame = 1


Query: 1    MVQTRLEEKIATIDQELHGIKKEIGKLQAMEKTLMEISKNMERQNQVMLRIMESAAQERS 60
            M Q R E ++  +++E+  I++E+ +L  MEKT +E     E Q  V       AA    
Sbjct: 680  MAQKRNEGRVDCLEKEVGEIREEMQRLPRMEKTSLE-----ETQKAV-------AALSLG 739

Query: 61   TMNERISELSMRTFLAKTNDEGEGSSRREDETKNEEKKPNDEGNHDRNKFKKVEMPIFNG 120
                  ++   R        E  G     DE +         GN +    ++VEMP+F G
Sbjct: 740  RNTTTAAQREDRAGWIPGVWEPSGGGMASDEMRRG-------GNGEWRGSRRVEMPVFTG 799

Query: 121  EDPDLWLFRAERYFRIHKLTESEKMTVSTISFEGPALNWFRSQEEREKFIDWANMKERLL 180
            E+PD W+FRA+RYF  + LTE EK+  + +S +G AL+W++  + RE F  W N+K RLL
Sbjct: 800  ENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSREVFGSWENLKRRLL 859

Query: 181  ERFRSSREGSLYGRFLRIQQTTTVDEYRNLFDKWVAPLTDLPEKVVEETFVSGLKPWIQA 240
             RFR ++EGSL  +FL ++Q  TV  Y   F+    PL  + E+V+E TF++GL P I+A
Sbjct: 860  LRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRA 919

Query: 241  EMDFCEPKGLAHMMKIVQKIENRE---------DIRNIIKANANSRAGETKGGTSWPMRT 300
            E    +P GL H+M++ Q++E+R          +     K  + +  GE K G ++  R 
Sbjct: 920  EQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENFQTRA 979

Query: 301  ITLRGTSKEEAPKEGPSKRLSDAEFQARKEKGLCFRCNEKYSHDHKCKTKELRELWMLVI 360
            + + G       +E P KRL+++E QAR+EKGL F+C EK+S  H+CK KELR    +++
Sbjct: 980  VAV-GEKTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSPGHRCK-KELR----VLL 1039

Query: 361  SGDDEEYEIIEEGEETMKELKSIEILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGV 420
              +DEE +  +  +   +E   IE+ +     VELS+NSVVGL+ PGTMK+KG I  K V
Sbjct: 1040 VHEDEEEDDNQFDDRATEEPALIELKD----AVELSLNSVVGLTTPGTMKIKGTIGSKEV 1099

Query: 421  VVLIDCGATHNFISEILVKELQLETKETLNYGVILGSGTAVKGKGICEAMELMIGEWKVI 479
            ++L+D GATHNF+S  LV++L L    T +YGV++G+G +VKGKGIC  + + +    V+
Sbjct: 1100 IILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVV 1137

[Close]

BLAST of CSPI04G17070 vs. NCBI nr
Match: gi|659094491|ref|XP_008448087.1| (PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 2.5e-67
Identity = 160/409 (39.12%), Postives = 242/409 (59.17%), Query Frame = 1


Query: 93  KNEEKKPNDEGNH---DRNKFKKVEMPIFNGEDPDLWLFRAERYFRIHKLTESEKMTVST 152
           K +E +P  E N    DR+K+KK+EMP+F  E+P+ W++RAE +F I+ L ESEK+ V+ 
Sbjct: 6   KMDETEPITEINGTVTDRSKYKKLEMPMFLEENPESWVYRAEHFFEINNLPESEKVKVAV 65

Query: 153 ISFEGPALNWFRSQEEREKFIDWANMKERLLERFRSSREGSLYGRFLRIQQTTTVDEYRN 212
           + F    ++W+R    ++K   W ++K R+ E FR S + SL  R +RIQQ  + +EY  
Sbjct: 66  VIFGQDEVDWYRWSHNKKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQDGSYNEYVK 125

Query: 213 LFDKWVAPLTDLPEKVVEETFVSGLKPWIQAEMDFCEPKGLAHMMKIVQKIENREDIRNI 272
            F  + APL  +   V+ + FV+GL+P +QAE+    P+ L   M+  Q + +R     +
Sbjct: 126 KFVIYSAPLPYMAGSVLVDAFVTGLEPSLQAEVISRHPQTLEDCMREAQLVNDRNLALKL 185

Query: 273 IKANANSRAGETKGG----------------TSWPMR--TITLRGTSKEEAPKEGPSKRL 332
            K        E  G                 T + M+  TI ++G  K+  P   P KRL
Sbjct: 186 SKMELGMTEWEEGGSSKVKKLGDVDKPPPRKTDFQMKQITIPIKGNFKKGEP---PVKRL 245

Query: 333 SDAEFQARKEKGLCFRCNEKYSHDHKCKTKELRELWMLVIS--GDDEEYEIIEEGEETMK 392
           SDAEF+AR ++GLCFRCN+KYS  H+CKTKE REL   +++   +DEE E  EE  E   
Sbjct: 246 SDAEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFFIMNEEEEDEEGESHEEVTEGTV 305

Query: 393 ELKSIEILEENQAIVELSINSVVGLSNPGTMKVKGKIQEKGVVVLIDCGATHNFISEILV 452
           ELK++E+ E+    V + + ++  LS+ GTMK+KG I++K +V+LID GATHNFI + LV
Sbjct: 306 ELKTLELTED----VAIEMKTMTRLSSKGTMKIKGWIRQKEIVILIDSGATHNFIHQSLV 365

Query: 453 KELQLETKETLNYGVILGSGTAVKGKGICEAMELMIGEWKVINEFLPLE 479
            +L+L  ++   +G  +G+GT  KGKGIC  +E+ + E  +I +FL +E
Sbjct: 366 VDLKLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITIIADFLAVE 407

The following BLAST results are available for this feature:

BLAST of CSPI04G17070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G17070 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B2I6_VITVI	3.3e-74	37.99	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1	[more]
E5GC18_CUCME	6.8e-59	33.73	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
J3SDF5_BETVU	1.3e-57	35.68	Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1	[more]
E5GC35_CUCME	2.3e-54	31.67	Gypsy/ty3 element polyprotein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
W9R4P8_9ROSA	6.1e-52	31.71	Uncharacterized protein OS=Morus notabilis GN=L484_024737 PE=4 SV=1	[more]

BLAST of CSPI04G17070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67020.1	3.4e-09	25.95	unknown protein	[more]
AT3G42723.1	1.1e-07	21.64	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]
AT3G30770.1	1.4e-07	33.01	Eukaryotic aspartyl protease family protein	[more]

BLAST of CSPI04G17070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119521\|ref\|XP_008459701.1\|	2.3e-148	55.29	PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo]	[more]
gi\|659109397\|ref\|XP_008454696.1\|	1.1e-134	54.87	PREDICTED: uncharacterized protein LOC103495051 [Cucumis melo]	[more]
gi\|659134102\|ref\|XP_008467029.1\|	8.9e-121	55.07	PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo]	[more]
gi\|147854459\|emb\|CAN78588.1\|	4.8e-74	37.99	hypothetical protein VITISV_043911 [Vitis vinifera]	[more]
gi\|659094491\|ref\|XP_008448087.1\|	2.5e-67	39.12	PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005162	Retrotrans_gag_dom
IPR013242	Retroviral aspartyl protease
IPR021109	Peptidase_aspartic_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17070.1	CSPI04G17070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 149..236 score: 1.2
IPR013242	Retroviral aspartyl protease	PFAM	PF08284	RVP_2	coord: 408..474 score: 8.
IPR021109	Aspartic peptidase domain	unknown	SSF50630	Acid proteases	coord: 395..473 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 3..23 score: -coord: 52..72 score: -coord: 27..47 scor
None	No IPR available	PANTHER	PTHR34482	FAMILY NOT NAMED	coord: 1..295 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G17070	Cucumber (Gy14) v2	cgybcpiB170
CSPI04G17070	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G17070	Cucumber (Gy14) v1	cgycpiB400
CSPI04G17070	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G17070	Watermelon (97103) v1	cpiwmB351