CSPI04G17020 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G17020
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Hepatocyte growth factor-regulated tyrosine kinase substrate, putative
Location	Chr4 : 14450852 .. 14452594 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGGGCAAGAGATGAGTTTACTCTTGATCTTGTAGAACAGTGTTCGTTTCAGAAGCAGAAACTAATGCATCTTGTGCTGTCTTCTCGGTATGGTTCCATCTTCGCCTGTTTCTTCCACAATGCATCAGTAATTGATTCCATTCAATGAATGGATGTTTTTCCTACTCAATGCTTTGTGAAACGATAACGTACTGTGTTAAGTAAATGAAAAGGAGACATGAAGCTACAAAATATTGTTGATATCATAATGGACAAATTTTGTAAATGAAAAAATGTGCAGTAATGTTTTTGTTTTCGTAACAACTTTGCGTGTAACTGAAAGAATCTCTTATATTGCTCACCCTGTTTTAACAATTGTAGATAGCTTCAAGGATGCTGAATTTGACACATCTGTAGATACCTCATAAATTAGTACATTATGAGAAATAAGCTTAATACAACGTTGCTTCCTTTTTCCAATTTACTGACCTTGAACTCTGCTATGTGACTGTTGTTTCAATTTTTCTTTTCTATTTCTATACTGTGGTTGTAACTCTTGTTAGCCTACCATAGATATCCTTTTTTAATATTGCATGAGATAGTCATTGTGTATTCTTTTTCACTTCTCAGTAAAACACGGTTATCATTATAATTTATTTAATTGAAACATAATTGCTGTCACAAAAGAAAATTTAAAAATTGAAACATACTTACAATAACTTGTAATTCTATTGGTCTATCATTTTGATTTCCAGTTGCTTTCACTGTGTTTTAGGGACGAGAAGATTGTCTGCGGTGCCATTGAATTGAATGAGAAGCTCCAAAAGGTCCTTGCAAGACATGATGCCCTCCTCTCTGGTCAGTTTATGTCGACTCAAAATCAGTTCAACGGCGAAGAAGTTGGTATGTCCAGATTGCCTGCTAATCATTATAACCATGACGAAGGAGAAGATGAAGAAGAGGCCGATCAACTTTTCCGAAGGTAATACACTACATTCGATGTTGATTTCAGTATGGAGTGGTGAATAAGCAAACTAAGTAGTGAGTGATATGGTCAATAACAGGTTGCGAAAAGGAAAGGCTTGTGTAAGGCCTGAAGACGAAGAGGATTCTTCAGAGGAGCGGCCGTCGTTGGGTTTGCTAGGATTGTCAATTCCAGTTGAACGAGCAAACCGTCCAATCATTCGACCTATTGACGAGAAGGTGTCAACGACATTGGAAATACAGCATGGTCAGGGTGTTTCAATACCACCACCACCAGTAAAGCATGCAGAAAGGGAGAAGTTCTTCAAGGATAAAAAAATAGATGTTGGAGTTGGACATATGAGAGGGCTTTCTTTACACAGTCGTAATGCTAGCAGCTCTCGTAGTGGAAGCATAGATTTCAACGAGTCATGAAGGAGTGGTGTGAAGAAGTGTTTGGGAGTGCAATTTTATTTATTTTCACTTCAACTCATTATTTGTAAAGTTGAGTCATTTTTCTTTCTTTCTTTTCAATGAGTTTGATATCTTTAAATTAAGGTGTAAGGGCCAGGGACTTACTGAATATATCCTTTATTCCATTCGTGTATAATTTTGTAATTTAAAGGTGGTTAACTATTTCAAGTTTGCTGAAGGTGAAAAAAGCCAAAGAAGGGCAATCGAAAGACCTTTATTTTTTTTTTTTTTTATTATAATGCCCGCAAAGACATTTTTTGGTTTGATATTGTTATTTATTTATTTATTTGGACCAGCTGTTATTCTTTCTGCTGCTCCTTTTTTAC

mRNA sequence

ATGCATCTTGTGCTGTCTTCTCGGGACGAGAAGATTGTCTGCGGTGCCATTGAATTGAATGAGAAGCTCCAAAAGGTCCTTGCAAGACATGATGCCCTCCTCTCTGGTCAGTTTATGTCGACTCAAAATCAGTTCAACGGCGAAGAAGTTGGTATGTCCAGATTGCCTGCTAATCATTATAACCATGACGAAGGAGAAGATGAAGAAGAGGCCGATCAACTTTTCCGAAGGTTGCGAAAAGGAAAGGCTTGTGTAAGGCCTGAAGACGAAGAGGATTCTTCAGAGGAGCGGCCGTCGTTGGGTTTGCTAGGATTGTCAATTCCAGTTGAACGAGCAAACCGTCCAATCATTCGACCTATTGACGAGAAGGTGTCAACGACATTGGAAATACAGCATGGTCAGGGTGTTTCAATACCACCACCACCAGTAAAGCATGCAGAAAGGGAGAAGTTCTTCAAGGATAAAAAAATAGATGTTGGAGTTGGACATATGAGAGGGCTTTCTTTACACAGTCGTAATGCTAGCAGCTCTCGTAGTGGAAGCATAGATTTCAACGAGTCATGA

Coding sequence (CDS)

ATGCATCTTGTGCTGTCTTCTCGGGACGAGAAGATTGTCTGCGGTGCCATTGAATTGAATGAGAAGCTCCAAAAGGTCCTTGCAAGACATGATGCCCTCCTCTCTGGTCAGTTTATGTCGACTCAAAATCAGTTCAACGGCGAAGAAGTTGGTATGTCCAGATTGCCTGCTAATCATTATAACCATGACGAAGGAGAAGATGAAGAAGAGGCCGATCAACTTTTCCGAAGGTTGCGAAAAGGAAAGGCTTGTGTAAGGCCTGAAGACGAAGAGGATTCTTCAGAGGAGCGGCCGTCGTTGGGTTTGCTAGGATTGTCAATTCCAGTTGAACGAGCAAACCGTCCAATCATTCGACCTATTGACGAGAAGGTGTCAACGACATTGGAAATACAGCATGGTCAGGGTGTTTCAATACCACCACCACCAGTAAAGCATGCAGAAAGGGAGAAGTTCTTCAAGGATAAAAAAATAGATGTTGGAGTTGGACATATGAGAGGGCTTTCTTTACACAGTCGTAATGCTAGCAGCTCTCGTAGTGGAAGCATAGATTTCAACGAGTCATGA

Homology

[Close]

BLAST of CSPI04G17020 vs. TrEMBL
Match: A0A0A0KXZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338940 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.0e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY
Sbjct: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI
Sbjct: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180
           DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG
Sbjct: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180

Query: 181 SIDFNES 188
           SIDFNES
Sbjct: 181 SIDFNES 187

[Close]

BLAST of CSPI04G17020 vs. TrEMBL
Match: A0A067KK37_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09342 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.9e-50
Identity = 113/188 (60.11%), Postives = 139/188 (73.94%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLV++SRDEK+V  AIELNE+L KVLAR+DA +SG+ M +      ++   +   ANH+
Sbjct: 231 MHLVMTSRDEKVVSRAIELNEQLHKVLARYDAFISGRSMPSDRSAVSDKTTST---ANHF 290

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
            HDE E+EEEA+QLFRRLRKGKAC RP DE +S EER S+GLLG SI  ER NRP+IRPI
Sbjct: 291 IHDEEEEEEEAEQLFRRLRKGKACARPVDEVNS-EERLSMGLLGSSIAGERLNRPLIRPI 350

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVG--VGHMRGLSLHSRNASSSR 180
                    + +   V+IPPPP KH ERE+FF++KK+D     GHMRGLSLHSRNASSSR
Sbjct: 351 ISSDQPHEPLVNPPPVAIPPPPAKHVERERFFQEKKVDGSGVTGHMRGLSLHSRNASSSR 410

Query: 181 SGSIDFNE 187
           SGSIDF++
Sbjct: 411 SGSIDFSD 414

[Close]

BLAST of CSPI04G17020 vs. TrEMBL
Match: A0A067F6C8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0143901mg PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.8e-50
Identity = 113/195 (57.95%), Postives = 136/195 (69.74%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMS------- 60
           MHLV++SRDEK+V  AI+LNE+LQ VLARHD LLS +  ST N  N ++  +S       
Sbjct: 233 MHLVMTSRDEKVVSQAIDLNEQLQNVLARHDVLLSERSTSTANHVNHQDGHLSTRSTTTA 292

Query: 61  RLPANHYNHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERAN 120
              ANH +H E E+EEEA+QL RR+RKGK C RPEDEE   E  P LG+LG SIP  R N
Sbjct: 293 NHSANHADHAEEEEEEEAEQLSRRMRKGKGCARPEDEEHLPERHP-LGILGSSIPAARLN 352

Query: 121 RPIIRPIDEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKID--VGVGHMRGLSLHS 180
           RP+IRP+  +        H Q V+IPPPP KH EREKFF++KK+D     GHMRGLSLHS
Sbjct: 353 RPLIRPVQAEPPHETN-AHPQPVTIPPPPAKHVEREKFFQEKKVDASAAAGHMRGLSLHS 412

Query: 181 RNASSSRSGSIDFNE 187
           RNASSSRSGS DF++
Sbjct: 413 RNASSSRSGSTDFSD 425

[Close]

BLAST of CSPI04G17020 vs. TrEMBL
Match: U5GFF3_POPTR (VHS domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s14580g PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.5e-50
Identity = 113/189 (59.79%), Postives = 138/189 (73.02%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQF-MSTQNQFNGEEVGMSRLPANH 60
           MHLV++SRDEK+V  AIELNE+LQKVLARHDA+LSG+  +S +N F+      +    NH
Sbjct: 236 MHLVMTSRDEKLVSRAIELNEQLQKVLARHDAILSGRSTVSDRNTFSDR----TTTAPNH 295

Query: 61  YNHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRP 120
           +NH+E E+EEE +QLFRRLRKGKAC RPED E +SEERP LG++G +IP ER NRP+IRP
Sbjct: 296 FNHEESEEEEEPEQLFRRLRKGKACARPED-EGNSEERPPLGIIGSTIPGERLNRPLIRP 355

Query: 121 IDEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVG--VGHMRGLSLHSRNASSS 180
           +  +        H   V IPPPP KH EREKFF++ K D      HMRGLSLH  NASSS
Sbjct: 356 LPSE-QPQEPSAHPAPVVIPPPPAKHIEREKFFQETKADGSDVDSHMRGLSLHCHNASSS 415

Query: 181 RSGSIDFNE 187
           R+GSIDF+E
Sbjct: 416 RAGSIDFSE 418

[Close]

BLAST of CSPI04G17020 vs. TrEMBL
Match: B9IP43_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-49
Identity = 112/188 (59.57%), Postives = 136/188 (72.34%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLV++SRDEK+V  AIELNE+LQKVLARHD+LLSG+   +      +    +   ANH+
Sbjct: 282 MHLVMTSRDEKLVSQAIELNEQLQKVLARHDSLLSGRSTVSDTTTISDRTTTT---ANHF 341

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NH+E E+EEE +QLFRRLRKGKAC RPED E +SEER  LGLLG +IP +R NRP+IRP+
Sbjct: 342 NHEESEEEEEPEQLFRRLRKGKACARPED-EGNSEERLPLGLLGSTIPGDRLNRPLIRPL 401

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGV--GHMRGLSLHSRNASSSR 180
             +            V IPPPP KH ER+KFF++KK D     GHMRGLSLHSRNASSS 
Sbjct: 402 PSEQPQDPNANCAP-VVIPPPPAKHMERQKFFQEKKADGSAVSGHMRGLSLHSRNASSSC 461

Query: 181 SGSIDFNE 187
           SGSIDF++
Sbjct: 462 SGSIDFSD 464

[Close]

BLAST of CSPI04G17020 vs. TAIR10
Match: AT5G63640.1 (AT5G63640.1 ENTH/VHS/GAT family protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-41
Identity = 106/219 (48.40%), Postives = 134/219 (61.19%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFM-----STQN-----------Q 60
           MHLV++SRDEK V  AIELNE+LQ++L RH+ LLSG+       +T N            
Sbjct: 232 MHLVMTSRDEKAVSKAIELNEQLQRILNRHEDLLSGRITVPSRSTTSNGYHSNLEPVRPI 291

Query: 61  FNGEE----------VGMSRLPAN--HYNHDEGEDEEEADQLFRRLRKGKACVRPEDEED 120
            NG++             S   +N  H   +E ++EEE +QLFRRLRKGKA  RPEDEE+
Sbjct: 292 SNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPEQLFRRLRKGKARARPEDEEE 351

Query: 121 SSEERPSLGLLGLSIPVERANRPIIRPIDEKVSTTLEIQHGQG--VSIPPPPVKHAEREK 180
            S   P  GL G +I  ER NRP+IRP+  + ++     H Q   V IPPPP KH EREK
Sbjct: 352 PS---PPQGLPGSAIHNERLNRPLIRPLPSEEASRGGDSHSQSPPVVIPPPPAKHVEREK 411

Query: 181 FFKDKKIDVGV---GHMRGLSLHSRNASSSRSGSIDFNE 187
           FFK+ K D  +   GHMRGLSLHSR+ SSSRSGS+DF++
Sbjct: 412 FFKENKGDGALGLPGHMRGLSLHSRDGSSSRSGSVDFSD 447

[Close]

BLAST of CSPI04G17020 vs. TAIR10
Match: AT3G08790.1 (AT3G08790.1 ENTH/VHS/GAT family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06
Identity = 42/164 (25.61%), Postives = 73/164 (44.51%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           +HLV S+ DE ++C  + LN+ LQ++LA+H+A+ SG  M  + + + +EV          
Sbjct: 229 VHLVNSTSDESMLCQGLALNDDLQRLLAKHEAIASGNSMIKKEEKSKKEVPKDTTQI--- 288

Query: 61  NHDEGEDEEEADQLFRRLRKG-KACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRP 120
             D G  E +   +      G K  +   D+ ++     SL L+ L  P  + + P+ +P
Sbjct: 289 -IDVGSSETKNGSVVAYTTNGPKIDLLSGDDFETPNADNSLALVPLGPP--QPSSPVAKP 348

Query: 121 IDEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGH 164
            D  +     +      S  P    HA  +K  ++     G GH
Sbjct: 349 -DNSIVLIDMLSDNNCESSTPTSNPHANHQKVQQNYSNGFGPGH 385

[Close]

BLAST of CSPI04G17020 vs. NCBI nr
Match: gi|449449813|ref|XP_004142659.1| (PREDICTED: target of Myb protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 372.1 bits (954), Expect = 5.8e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY
Sbjct: 230 MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 289

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI
Sbjct: 290 NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 349

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180
           DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG
Sbjct: 350 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 409

Query: 181 SIDFNES 188
           SIDFNES
Sbjct: 410 SIDFNES 416

[Close]

BLAST of CSPI04G17020 vs. NCBI nr
Match: gi|778694136|ref|XP_011653749.1| (PREDICTED: target of Myb protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 372.1 bits (954), Expect = 5.8e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY
Sbjct: 213 MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 272

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI
Sbjct: 273 NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 332

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180
           DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG
Sbjct: 333 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 392

Query: 181 SIDFNES 188
           SIDFNES
Sbjct: 393 SIDFNES 399

[Close]

BLAST of CSPI04G17020 vs. NCBI nr
Match: gi|700199332|gb|KGN54490.1| (hypothetical protein Csa_4G338940 [Cucumis sativus])

HSP 1 Score: 372.1 bits (954), Expect = 5.8e-100
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY
Sbjct: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI
Sbjct: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180
           DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG
Sbjct: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180

Query: 181 SIDFNES 188
           SIDFNES
Sbjct: 181 SIDFNES 187

[Close]

BLAST of CSPI04G17020 vs. NCBI nr
Match: gi|659069348|ref|XP_008449359.1| (PREDICTED: LOW QUALITY PROTEIN: TOM1-like protein 1 [Cucumis melo])

HSP 1 Score: 362.1 bits (928), Expect = 6.0e-97
Identity = 181/187 (96.79%), Postives = 184/187 (98.40%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY
Sbjct: 230 MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 289

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
           NHDEGEDEEEA+QL+RRLRKGKACV PEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI
Sbjct: 290 NHDEGEDEEEAEQLYRRLRKGKACVMPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 349

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVGVGHMRGLSLHSRNASSSRSG 180
           DEKVSTTLEIQHGQGV IPPPPVKHAEREKFFK+KK DVGVGHMRGLSLHSRNASSSRSG
Sbjct: 350 DEKVSTTLEIQHGQGVGIPPPPVKHAEREKFFKEKKXDVGVGHMRGLSLHSRNASSSRSG 409

Query: 181 SIDFNES 188
           SIDFNES
Sbjct: 410 SIDFNES 416

[Close]

BLAST of CSPI04G17020 vs. NCBI nr
Match: gi|802607792|ref|XP_012073991.1| (PREDICTED: TOM1-like protein 2 [Jatropha curcas])

HSP 1 Score: 206.5 bits (524), Expect = 4.2e-50
Identity = 113/188 (60.11%), Postives = 139/188 (73.94%), Query Frame = 1


Query: 1   MHLVLSSRDEKIVCGAIELNEKLQKVLARHDALLSGQFMSTQNQFNGEEVGMSRLPANHY 60
           MHLV++SRDEK+V  AIELNE+L KVLAR+DA +SG+ M +      ++   +   ANH+
Sbjct: 231 MHLVMTSRDEKVVSRAIELNEQLHKVLARYDAFISGRSMPSDRSAVSDKTTST---ANHF 290

Query: 61  NHDEGEDEEEADQLFRRLRKGKACVRPEDEEDSSEERPSLGLLGLSIPVERANRPIIRPI 120
            HDE E+EEEA+QLFRRLRKGKAC RP DE +S EER S+GLLG SI  ER NRP+IRPI
Sbjct: 291 IHDEEEEEEEAEQLFRRLRKGKACARPVDEVNS-EERLSMGLLGSSIAGERLNRPLIRPI 350

Query: 121 DEKVSTTLEIQHGQGVSIPPPPVKHAEREKFFKDKKIDVG--VGHMRGLSLHSRNASSSR 180
                    + +   V+IPPPP KH ERE+FF++KK+D     GHMRGLSLHSRNASSSR
Sbjct: 351 ISSDQPHEPLVNPPPVAIPPPPAKHVERERFFQEKKVDGSGVTGHMRGLSLHSRNASSSR 410

Query: 181 SGSIDFNE 187
           SGSIDF++
Sbjct: 411 SGSIDFSD 414

The following BLAST results are available for this feature:

BLAST of CSPI04G17020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G17020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ2_CUCSA	4.0e-100	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338940 PE=4 SV=1	[more]
A0A067KK37_JATCU	2.9e-50	60.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09342 PE=4 SV=1	[more]
A0A067F6C8_CITSI	3.8e-50	57.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0143901mg PE=4 SV=1	[more]
U5GFF3_POPTR	8.5e-50	59.79	VHS domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s14580g...	[more]
B9IP43_POPTR	9.4e-49	59.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=2	[more]

BLAST of CSPI04G17020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63640.1	3.8e-41	48.40	ENTH/VHS/GAT family protein	[more]
AT3G08790.1	3.0e-06	25.61	ENTH/VHS/GAT family protein	[more]

BLAST of CSPI04G17020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449813\|ref\|XP_004142659.1\|	5.8e-100	100.00	PREDICTED: target of Myb protein 1 isoform X1 [Cucumis sativus]	[more]
gi\|778694136\|ref\|XP_011653749.1\|	5.8e-100	100.00	PREDICTED: target of Myb protein 1 isoform X2 [Cucumis sativus]	[more]
gi\|700199332\|gb\|KGN54490.1\|	5.8e-100	100.00	hypothetical protein Csa_4G338940 [Cucumis sativus]	[more]
gi\|659069348\|ref\|XP_008449359.1\|	6.0e-97	96.79	PREDICTED: LOW QUALITY PROTEIN: TOM1-like protein 1 [Cucumis melo]	[more]
gi\|802607792\|ref\|XP_012073991.1\|	4.2e-50	60.11	PREDICTED: TOM1-like protein 2 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0044464	cell part
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G17020.1	CSPI04G17020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13856	VHS DOMAIN CONTAINING PROTEIN FAMILY	coord: 1..148 score: 1.6
None	No IPR available	PANTHER	PTHR13856:SF81	ENTH/VHS/GAT FAMILY PROTEIN	coord: 1..148 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G17020	Csa4G338940	Cucumber (Chinese Long) v2	cpicuB181
CSPI04G17020	Lsi01G020100	Bottle gourd (USVL1VR-Ls)	cpilsiB265
CSPI04G17020	CsaV3_4G027580	Cucumber (Chinese Long) v3	cpicucB212
CSPI04G17020	Cucsa.017950	Cucumber (Gy14) v1	cgycpiB400
CSPI04G17020	CsGy4G016300	Cucumber (Gy14) v2	cgybcpiB170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G17020	Watermelon (97103) v1	cpiwmB351