CSPI04G15100 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G15100
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 12585096 .. 12585323 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTTCCTACGCCACTTATTATAGTCATAGTGGTTAGTGTTTCCATTTTTATCGTTAGCACTGTCATGACTTGTCTCAGCTCAAAGAGCACTGGAGGTGCCGAAGGCCCCCGTCCTGATATAGAAGCCAATTATGGAGGTGGAGGTGCGGGTCCTGGCGACGGCCGGGGATGTGGAGGCGATGGAGGTGGGGGTGGTGGAGGTGGGTGTGGGGGTGGCGACTAA

mRNA sequence

ATGTCGTTTCCTACGCCACTTATTATAGTCATAGTGGTTAGTGTTTCCATTTTTATCGTTAGCACTGTCATGACTTGTCTCAGCTCAAAGAGCACTGGAGGTGCCGAAGGCCCCCGTCCTGATATAGAAGCCAATTATGGAGGTGGAGGTGCGGGTCCTGGCGACGGCCGGGGATGTGGAGGCGATGGAGGTGGGGGTGGTGGAGGTGGGTGTGGGGGTGGCGACTAA

Coding sequence (CDS)

ATGTCGTTTCCTACGCCACTTATTATAGTCATAGTGGTTAGTGTTTCCATTTTTATCGTTAGCACTGTCATGACTTGTCTCAGCTCAAAGAGCACTGGAGGTGCCGAAGGCCCCCGTCCTGATATAGAAGCCAATTATGGAGGTGGAGGTGCGGGTCCTGGCGACGGCCGGGGATGTGGAGGCGATGGAGGTGGGGGTGGTGGAGGTGGGTGTGGGGGTGGCGACTAA
Homology
[Close]
BLAST of CSPI04G15100 vs. TrEMBL
Match: A0A0A0L2D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297460 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.5e-24
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 1  MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDGRGCG 60
          MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDG GCG
Sbjct: 1  MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDGGGCG 60

Query: 61 GDGGGGGGGGCGGGD 76
          GDGGGGGGGGCGGGD
Sbjct: 61 GDGGGGGGGGCGGGD 75

[Close]
BLAST of CSPI04G15100 vs. NCBI nr
Match: gi|700199138|gb|KGN54296.1| (hypothetical protein Csa_4G297460 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1 

Query: 1  MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDGRGCG 60
          MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDG GCG
Sbjct: 1  MSFPTPLIIVIVVSVSIFIVSTVMTCLSSKSTGGAEGPRPDIEANYGGGGAGPGDGGGCG 60

Query: 61 GDGGGGGGGGCGGGD 76
          GDGGGGGGGGCGGGD
Sbjct: 61 GDGGGGGGGGCGGGD 75

The following BLAST results are available for this feature:
BLAST of CSPI04G15100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G15100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2D1_CUCSA9.5e-2498.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297460 PE=4 SV=1[more]
BLAST of CSPI04G15100 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G15100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199138|gb|KGN54296.1|1.4e-2398.67hypothetical protein Csa_4G297460 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G15100.1CSPI04G15100.1mRNA