CSPI04G15010 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G15010
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 12540537 .. 12541024 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGGTACTGACAATTAGTTCTTTTCAAGAAATATATATTATATTAAACATCAATTAAAAAGAAAGTCGTCAGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACGTTTAATTTGTCGAAAGATGGAGGCGGCTTGATCCAGTTACGGAGGTGAGTTTAATTATTCTTTTTCTTTTTTAAATTGATATCTTGATTTTTAGAAAAGGAGGCTTTTAAGAATTCCTCATAGTATTTCATAATCCAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT

mRNA sequence

ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACTTACGGAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT

Coding sequence (CDS)

ATGATGATGCAAAAACTAAATCATGTCAAAGATTCTACGTGGAGTTTGAGTTTCGTAGAACAACACTTGAGCCCGTCGTTTGAGGAAGGGAACTCTAGGCGGCATCAACTTACGGAGGAGCTTCTTGTTTGGGCTATCTTGGATTTGGAGATTGTTGATTGCTTTATTTCTGTCATCCCAGATTGTCCAGCAGGTGATAGCATAAATATGTTGATGAGATCCTCTTTAGAGCATGTTGAGCTGAGCATGCCAACGGTCTTTGAAGCTGTTGTAGTAGTCGGACTGGAT
Homology
[Close]
BLAST of CSPI04G15010 vs. TrEMBL
Match: A0A0A0L2B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296880 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-42
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MMMQKLNHVKDSTWSLSFVEQHLSPSFEEGNSRR-HQLTEELLVWAILDLEIVDCFISVI 60
          MMMQKLN+VKDSTWSLSFVEQHLSPSFEEGNSRR   +TEELLVWAILDLEIVDCFISVI
Sbjct: 1  MMMQKLNNVKDSTWSLSFVEQHLSPSFEEGNSRRLDPVTEELLVWAILDLEIVDCFISVI 60

Query: 61 PDCPAGDSINMLMRSSLEHVELSMPTVFEAVVVVGLD 97
          PDCPAGDSINMLMRSSLEHVE+SMPTVFEAVVVVGLD
Sbjct: 61 PDCPAGDSINMLMRSSLEHVEMSMPTVFEAVVVVGLD 97

[Close]
BLAST of CSPI04G15010 vs. NCBI nr
Match: gi|700199128|gb|KGN54286.1| (hypothetical protein Csa_4G296880 [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MMMQKLNHVKDSTWSLSFVEQHLSPSFEEGNSRR-HQLTEELLVWAILDLEIVDCFISVI 60
          MMMQKLN+VKDSTWSLSFVEQHLSPSFEEGNSRR   +TEELLVWAILDLEIVDCFISVI
Sbjct: 1  MMMQKLNNVKDSTWSLSFVEQHLSPSFEEGNSRRLDPVTEELLVWAILDLEIVDCFISVI 60

Query: 61 PDCPAGDSINMLMRSSLEHVELSMPTVFEAVVVVGLD 97
          PDCPAGDSINMLMRSSLEHVE+SMPTVFEAVVVVGLD
Sbjct: 61 PDCPAGDSINMLMRSSLEHVEMSMPTVFEAVVVVGLD 97

The following BLAST results are available for this feature:
BLAST of CSPI04G15010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G15010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2B9_CUCSA3.3e-4293.81Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296880 PE=4 SV=1[more]
BLAST of CSPI04G15010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G15010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199128|gb|KGN54286.1|4.8e-4293.81hypothetical protein Csa_4G296880 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G15010.1CSPI04G15010.1mRNA