CSPI04G14830 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G14830
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGlucose-induced degradation-like protein, putative
LocationChr4 : 12409781 .. 12413281 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGTTGGAGGTTAATTTTAATGTATTTTTCATCCCATTTGGCATTTGATCTCTAAAAACTAAAAAGCTCTGTTAGACAGTCATCCCTTCTTCTAGATTCAATTTTCCGGTAATCTAATTCCAACCACCGGAAATTTAGCAGCAAGGAAATGCCGGTGCGAGTTGAGAGCTCTACGCCTTCTCTAATTTCGGGTAATTCCAATCCATCCTTCTTCTATATTTCTTGCCTCTGATCGATTCTGAAACTTGGGTTCCCCCCTTCCCGATCTATCCATTCATGAATCAACCTGTGTCAATTAGGGTTTCCATTACACTCACTTTTATCGCTACTTAACTTGCTTTTACTAAATCGATTCGAGTTTCTCATTCATATTTTTGCTGCTCGTAGGTGCTGATCCTAAGCAAACCACTCCTCAAGCTTGTACATTGCTTAGCGTAGGACAGGTTTCATATTCTCTAATCTTTTTTTTCCTTAATTCAGTACTTGCCCATATGCCATTTTGATTTGGGTTGAATGATAATTGAAAATATCTTCAAATAGCCTCGTGATTTTTTTTATTTTATTATTATTATTTTATTTTATTTTGTATCAGGCGTTCTCCGGTACTCAGAATGTCTCTAATAATCAAAAGGATGAGGCTTGGAGGGTGAATGTACGAATACAGGGATTGGACCTTGAACATGGGTATCTTTGTGGCACGATGGAGGCCCTTAATGTTCCTATGGCGGACACTCCGGTAAATAAACTCTTTGTTTGTTTCCTGTGAAAAATGAGTGTAAATATTAACCTGTTTGGGTGATCGCCTCCATATTTCTTCTCTGCTGTGATAAACACAACCTGCTTGTTTTAATTGTGTTCATATTCTTTGATCGACCTGTAATGTTTCTTGATGTTGTTATTATGCTAGATGCACCTTACCTCACTTAGCAAATGAGAGTACTTTCCTCTGACTTTGATCTGAGAGTGTGCACATGCTTGATAATGGACTTCATGAAATGTGTTGCTTTGTTGCTTGTCATTCCTCTCTTAAGAATGAAAGAACCATTTAGAATTTCCTTTAAGATAACTCTGTTGGTTCTGACAGGCAAAACATTTGTCTCATTTTAATCAACTAAAACAATATACGATCTAGTAGTAAAAAAGGGCTTAAAATGGATGCTATGAATATGACGATAGTTATGTTTACTTATTCAGAGACAGTAATCTTCTCTTATTTTCATTTTAATTGTTCCCTTGAGTGGGAACTAGAATGGCTCTCGATGTACCTAAAACAAATTACTGTTTCTTGCCTAACATGAAGGACTCGCTCATGTTTTCATTTCCATGTTTTCCCAATTAGGAATGAAAAATTGATTCTTGATCTCTGTACCCATCTCGAACTGGGTAATATTTTCATTGATCGACTTTTTCGTGGGTGGAGGATGACATTCTCATCGTCCCACTTTGTGAGCCCCATCGTCTTTCCTCTTCTTCTTCTTCTTCTCCCGCTCTTTCTCTCTGCTCGTTTCTTGTAAGTCTTGCAAGTATTCAACATTGATAACAAAAATATCACTTAACAATCTTCTCCATATCTATTCCAATTGATATCAATCTTCTCCATTCTTCTTTTTTCTTTTTTGTATGCCCTCTTTCTGTCATTGTTTCTGAATGTATATTGTCTTTTTCTTAAAAAAAACGAAACAGACAAACAAGCAAACAAACCGTCGGAGCATTAGACCATTAATTTTTTGCTTTTCTTTTGACAGTAATGCTACACAGGAAGATCCAGTACAACCTTTAGAATTTAGATATCGGTTCATTTCCATATTACAATAGTGTGCATCAGTGGCAAATGCCAAGAGACGATGTCGCCTTTTGAATGAAGTGTCAGAGATTGGGATAAAAGATTTTAAAATAGAGCTAATAATGGATTGGTTATCATAATTTTTTTTATCAATGAATAGTGACGAAGCATCTCATATATCATTCTGGTTGCTATATTAGAACCATAATCACCTCAGTATAAATTAATCATGTCTAAAAATACATAATCGACATTATTTGATTCCATTCTATTTGAGAAAGTATACTTACTTAAATCCATGTTTTTAAAAAATTGTGTGCTGGTTTCCTTTCTACTGAATGTATCTAGGCCTTATTTGGATAGATATTATTATAGCTTCATTTGAATTTTGTTTGGCTTTCTGATTGGGACAGGTAGTAACCTTTTGGGAAGGGGAGATTGTGGATGGCAAGAATTATAATTTCTTCACTGGAAAATGGCAAGCAGCGTATGTAATTAATATATAAATAAGCAAGAATCACCAAGCTTCTTTGCATTAAGCTGTTAAAACAAACTTATTTCTGATATGAACTTCGATGTTAGTAAGAACATGAAAATCTTAAGCTCTTTACTCAAGTCTTTTTCTACCATCTTTCAGACCAGAAGAGGATATACGGCACTGGACCAAATTTCCGTCATTTGCTCCCCTAATGGTGAGGACCCCATAGTCAATACATCCCTTCGTTTACAGCTATTCTAATCTCCATTGAAAATGGTATGTTTTTTTTTAACTTTTGCTCTTAAAAATGCTGTTCCAGAACCAAGTGGAAGTTGATGGTGGGAAATCTTTGGATCTTAGTAATTATCCATGCATCTTTATGGTATTCTGACCTCTTATTACACTTGCTCTTTTCGTGTCCACAAACATAATTACGCTCTTAAAACCAAGTATTGTGGTTTTTTTGCAGAGATGGAAAGAGCAATACTTTGTGAATGTTGGAACCGATTGTGGGTTAACTATAGCTGGTTTTTATTATGTTTGCTTCTCTTGTAGTGACGGTTCTATCAATGGCTTCTACTATGACCCTAATAGTAGGTATGAATTCAAATTATAAGGACAGATTAAACACAGTTTTCCTCTGCTTTGGCAATATACTTAACAAGATGCTGCTTGAAATCTGCAGCCCATTTCAGAAGCTCGAACTTAAATCTACAAACGAGGGAAGATCGGGTTTCAGCTTCTCATCTTACGAGTTGCAATGACACTAAATGGGAAATTCCTTATACAATTATGGTTGGTTTAACTTCTTGCCATATATATGAGTTCCATGGTTTTTCTGCTTCATACAACTCAAGTTGAAATAGTTGAGATTTTTCTGTTCCATGG

mRNA sequence

ATGCCGGTGCGAGTTGAGAGCTCTACGCCTTCTCTAATTTCGGGTGCTGATCCTAAGCAAACCACTCCTCAAGCTTGTACATTGCTTAGCGTAGGACAGGCGTTCTCCGGTACTCAGAATGTCTCTAATAATCAAAAGGATGAGGCTTGGAGGGTGAATGTACGAATACAGGGATTGGACCTTGAACATGGGTATCTTTGTGGCACGATGGAGGCCCTTAATGTTCCTATGGCGGACACTCCGGTAGTAACCTTTTGGGAAGGGGAGATTGTGGATGGCAAGAATTATAATTTCTTCACTGGAAAATGGCAAGCAGCACCAGAAGAGGATATACGGCACTGGACCAAATTTCCGTCATTTGCTCCCCTAATGAACCAAGTGGAAGTTGATGGTGGGAAATCTTTGGATCTTAGTAATTATCCATGCATCTTTATGAGATGGAAAGAGCAATACTTTGTGAATGTTGGAACCGATTGTGGGTTAACTATAGCTGGTTTTTATTATGTTTGCTTCTCTTGTAGTGACGGTTCTATCAATGGCTTCTACTATGACCCTAATAGTAGCCCATTTCAGAAGCTCGAACTTAAATCTACAAACGAGGGAAGATCGGGTTTCAGCTTCTCATCTTACGAGTTGCAATGA

Coding sequence (CDS)

ATGCCGGTGCGAGTTGAGAGCTCTACGCCTTCTCTAATTTCGGGTGCTGATCCTAAGCAAACCACTCCTCAAGCTTGTACATTGCTTAGCGTAGGACAGGCGTTCTCCGGTACTCAGAATGTCTCTAATAATCAAAAGGATGAGGCTTGGAGGGTGAATGTACGAATACAGGGATTGGACCTTGAACATGGGTATCTTTGTGGCACGATGGAGGCCCTTAATGTTCCTATGGCGGACACTCCGGTAGTAACCTTTTGGGAAGGGGAGATTGTGGATGGCAAGAATTATAATTTCTTCACTGGAAAATGGCAAGCAGCACCAGAAGAGGATATACGGCACTGGACCAAATTTCCGTCATTTGCTCCCCTAATGAACCAAGTGGAAGTTGATGGTGGGAAATCTTTGGATCTTAGTAATTATCCATGCATCTTTATGAGATGGAAAGAGCAATACTTTGTGAATGTTGGAACCGATTGTGGGTTAACTATAGCTGGTTTTTATTATGTTTGCTTCTCTTGTAGTGACGGTTCTATCAATGGCTTCTACTATGACCCTAATAGTAGCCCATTTCAGAAGCTCGAACTTAAATCTACAAACGAGGGAAGATCGGGTTTCAGCTTCTCATCTTACGAGTTGCAATGA
Homology
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BLAST of CSPI04G14830 vs. Swiss-Prot
Match: GID4_HUMAN (Glucose-induced degradation protein 4 homolog OS=Homo sapiens GN=GID4 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 74/213 (34.74%), Postives = 98/213 (46.01%), Query Frame = 1 

Query: 1   MPVRVESSTPSLISGADPKQTTPQ----------ACTLLSVGQAFSGTQNVSNNQKDEAW 60
           MPVR E   P+  S A      P           A +LL  G  F G Q    N  D   
Sbjct: 84  MPVRTECPPPAGASAASAASLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYD--- 143

Query: 61  RVNVRIQGLDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEED 120
            V V +Q +D  + YLCG ++   +      + TF+EGEI+  K + F T KW A  + D
Sbjct: 144 -VEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIIS-KKHPFLTRKWDADEDVD 203

Query: 121 IRHWTKFPSFAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFV---NVGTDCGLTIAGFY 180
            +HW KF +F         D     +L N   +FMRWKEQ+ V    +    G + AGFY
Sbjct: 204 RKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFY 263

Query: 181 YVCFSCSDGSINGFYYDPNSSPFQKLELKSTNE 201
           Y+CF  S  SI G+YY  +S  +Q L L    E
Sbjct: 264 YICFQKSAASIEGYYYHRSSEWYQSLNLTHVPE 291

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BLAST of CSPI04G14830 vs. Swiss-Prot
Match: GID4_MOUSE (Glucose-induced degradation protein 4 homolog OS=Mus musculus GN=Gid4 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25
Identity = 76/213 (35.68%), Postives = 100/213 (46.95%), Query Frame = 1 

Query: 1   MPVRVE------SSTPSLISGADPKQTTPQ----ACTLLSVGQAFSGTQNVSNNQKDEAW 60
           MPVR E      +ST S  S   P     Q    A +LL  G  F G Q    N  D   
Sbjct: 1   MPVRTECPPPAGASTTSAASLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYD--- 60

Query: 61  RVNVRIQGLDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEED 120
            V V +Q +D  + YLCG ++   +      + TF+EGEI+  K + F T KW A  + D
Sbjct: 61  -VEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIIS-KKHPFLTRKWDADEDVD 120

Query: 121 IRHWTKFPSFAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFV---NVGTDCGLTIAGFY 180
            +HW KF +F         D     +L N   +FMRWKEQ+ V    +    G + AGFY
Sbjct: 121 RKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFY 180

Query: 181 YVCFSCSDGSINGFYYDPNSSPFQKLELKSTNE 201
           Y+CF  S  SI G+YY  +S  +Q L L    E
Sbjct: 181 YICFQKSAASIEGYYYHRSSEWYQSLNLTHVPE 208

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BLAST of CSPI04G14830 vs. Swiss-Prot
Match: YG29_YEAST (Uncharacterized protein YGR066C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR066C PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12
Identity = 57/204 (27.94%), Postives = 88/204 (43.14%), Query Frame = 1 

Query: 29  LSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLDLE--------HGYLCGTMEALNVPMADT 88
           L  G  F G+Q+     K   + V V+I  ++L           ++ GT    N+     
Sbjct: 79  LRPGLRFGGSQS----SKYTYYTVEVKIDTVNLPLYKDSRSLDPHVTGTFTIKNLTPVLD 138

Query: 89  PVVTFWEGEIVDGKNYNFFTGKWQAAP---------EEDIRHWTKFPSF-APLMNQVEVD 148
            VVT +EG +++   +   +  W A           E D  HW +F  F +   +  E +
Sbjct: 139 KVVTLFEGYVINYNQFPLCSLHWPAEETLDPYMAQRESDCSHWKRFGHFGSDNWSLTERN 198

Query: 149 GGK----SLDLSNYPCIFMRWKEQYFV------NVGTDC-----GLTIAGFYYVCFSCSD 200
            G+    S +  N   I+++WKE++ +      N+  D      G +  GFYYVC     
Sbjct: 199 FGQYNHESAEFMNQRYIYLKWKERFLLDDEEQENLMLDDNHHLEGASFEGFYYVCLDQLT 258

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BLAST of CSPI04G14830 vs. Swiss-Prot
Match: GID4_YEAST (Vacuolar import and degradation protein 24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VID24 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.3e-10
Identity = 53/222 (23.87%), Postives = 85/222 (38.29%), Query Frame = 1 

Query: 50  WRVNVRIQGLDLEHG-------YLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGK 109
           ++V V ++ +DL          +L G +    +      + T++E   V+ K   F +  
Sbjct: 140 YQVTVNLKTVDLPKKDCTSLSPHLSGFLSIRGLTNQHPEISTYFEAYAVNHKELGFLSSS 199

Query: 110 WQAAP---------EEDIRHWTKFPSFAPLMNQVEVDGGKSLDLS--------------- 169
           W+  P         + D+ HW  FPSF  L    + +G  S D +               
Sbjct: 200 WKDEPVLNEFKATDQTDLEHWINFPSFRQLFLMSQKNGLNSTDDNGTTNAAKKLPPQQLP 259

Query: 170 ------------------------NYPCIFMRWKEQYFV-----NVGTDCGLTIAGFYYV 212
                                   N   IFM+WKE++ V       G D G +  GFYY+
Sbjct: 260 TTPSADAGNISRIFSQEKQFDNYLNERFIFMKWKEKFLVPDALLMEGVD-GASYDGFYYI 319

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BLAST of CSPI04G14830 vs. TrEMBL
Match: A0A0A0KXJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296220 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.2e-124
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 

Query: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60
           MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD
Sbjct: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60

Query: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120
           LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF
Sbjct: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120

Query: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180
           APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING
Sbjct: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180

Query: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 213

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BLAST of CSPI04G14830 vs. TrEMBL
Match: A5C6Z4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019443 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 7.1e-109
Identity = 188/214 (87.85%), Postives = 200/214 (93.46%), Query Frame = 1 

Query: 1   MPVRV-ESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVRV E+S PS +SGA+P  T+P ACTLLSVGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRVVENSAPSQVSGANPGHTSPPACTLLSVGQAFSGTQNVSSLQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DL+HGYLCGTMEALNVPMADTPVVTFWEGEIVD KNY FFTGKW+A+PE+DIRHWTKFPS
Sbjct: 61  DLDHGYLCGTMEALNVPMADTPVVTFWEGEIVDAKNYTFFTGKWEASPEDDIRHWTKFPS 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           F+PL+ QVE DGGKSLDLSNY  IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGSIN
Sbjct: 121 FSPLVGQVEADGGKSLDLSNYQYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCNDGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214

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BLAST of CSPI04G14830 vs. TrEMBL
Match: A0A067KV08_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09107 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 9.2e-109
Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 1 

Query: 1   MPVR-VESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVR VE+S PS ISGA+  QT+P  CTLLSVGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRIVETSAPSQISGANSGQTSPPFCTLLSVGQAFSGTQNVSSMQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DL+HGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNY FFTGKW+A+PE+DIRHWTKFP 
Sbjct: 61  DLDHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYTFFTGKWEASPEDDIRHWTKFPY 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           FAP   QVEVDGGKSLDLSNYP IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGSIN
Sbjct: 121 FAPFSCQVEVDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCADGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214

[Close]
BLAST of CSPI04G14830 vs. TrEMBL
Match: D7THK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00800 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.0e-107
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 1 

Query: 1   MPVRV-ESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVRV E+S PS +SGA+   T+P ACTLLSVGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRVVENSAPSQVSGANLGHTSPPACTLLSVGQAFSGTQNVSSVQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DL+HGYLCGTMEALNVPMADTPVVTFWEGEIVD KNY FFTGKW+A+PE+DIRHWTKFPS
Sbjct: 61  DLDHGYLCGTMEALNVPMADTPVVTFWEGEIVDAKNYTFFTGKWEASPEDDIRHWTKFPS 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           F+PL+ QVE DGGKSLDLSNY  IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGSIN
Sbjct: 121 FSPLVGQVEADGGKSLDLSNYQYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCNDGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214

[Close]
BLAST of CSPI04G14830 vs. TrEMBL
Match: A0A0J8F587_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111500 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.0e-107
Identity = 188/214 (87.85%), Postives = 197/214 (92.06%), Query Frame = 1 

Query: 1   MPVRV-ESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVRV E+S PS I G+    T+P  CTLL VGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRVSEASVPSQIPGSCSGHTSPPPCTLLGVGQAFSGTQNVSSVQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVD KNY FFTGKW+A PE+DIRHWTKFPS
Sbjct: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEATPEDDIRHWTKFPS 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           FAPL+NQVEVDGGKSLDL+NYP IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN
Sbjct: 121 FAPLLNQVEVDGGKSLDLNNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKS+NEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSSNEGRSGFSFSSYELQ 214

[Close]
BLAST of CSPI04G14830 vs. TAIR10
Match: AT2G37680.1 (AT2G37680.1 Vacuolar import/degradation protein Vid24 (InterPro:IPR018618))

HSP 1 Score: 375.9 bits (964), Expect = 1.6e-104
Identity = 174/215 (80.93%), Postives = 193/215 (89.77%), Query Frame = 1 

Query: 1   MPVRV-ESSTPSLISGADPKQTTP-QACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQG 60
           MPVRV ES+TP+ +SG DP   +P    +LL  GQAFSGTQNVSN QK+EAWRVNV+IQG
Sbjct: 1   MPVRVVESNTPAQVSGTDPGNRSPLPPSSLLGAGQAFSGTQNVSNQQKEEAWRVNVQIQG 60

Query: 61  LDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFP 120
           +DLEHGYLCGTMEALNVPMADTPV+TFWEGEIVDGKNY F+TGKW+A  E+D+RHW+KFP
Sbjct: 61  IDLEHGYLCGTMEALNVPMADTPVITFWEGEIVDGKNYTFYTGKWEATREDDMRHWSKFP 120

Query: 121 SFAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSI 180
           SF+PL  QVE DGG+ LDL+NYP IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSI
Sbjct: 121 SFSPLQGQVESDGGRQLDLNNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSI 180

Query: 181 NGFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           +GFYYDPNSSPFQKLELK+ NEGRSGFSFSSYELQ
Sbjct: 181 SGFYYDPNSSPFQKLELKTVNEGRSGFSFSSYELQ 215

[Close]
BLAST of CSPI04G14830 vs. NCBI nr
Match: gi|449448610|ref|XP_004142059.1| (PREDICTED: glucose-induced degradation protein 4 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 453.8 bits (1166), Expect = 1.7e-124
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1 

Query: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60
           MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD
Sbjct: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60

Query: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120
           LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF
Sbjct: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120

Query: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180
           APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING
Sbjct: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180

Query: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 213

[Close]
BLAST of CSPI04G14830 vs. NCBI nr
Match: gi|659069095|ref|XP_008448124.1| (PREDICTED: glucose-induced degradation protein 4 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 8.5e-124
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 1 

Query: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60
           MPVRVESSTPS ISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD
Sbjct: 1   MPVRVESSTPSQISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60

Query: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120
           LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF
Sbjct: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120

Query: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180
           APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING
Sbjct: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180

Query: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 213

[Close]
BLAST of CSPI04G14830 vs. NCBI nr
Match: gi|659069097|ref|XP_008448129.1| (PREDICTED: glucose-induced degradation protein 4 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-120
Identity = 209/213 (98.12%), Postives = 209/213 (98.12%), Query Frame = 1 

Query: 1   MPVRVESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGLD 60
           MPVRVESSTPS ISGADPKQTTPQACTLLS   AFSGTQNVSNNQKDEAWRVNVRIQGLD
Sbjct: 1   MPVRVESSTPSQISGADPKQTTPQACTLLS---AFSGTQNVSNNQKDEAWRVNVRIQGLD 60

Query: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120
           LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF
Sbjct: 61  LEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPSF 120

Query: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180
           APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING
Sbjct: 121 APLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSING 180

Query: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 FYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 210

[Close]
BLAST of CSPI04G14830 vs. NCBI nr
Match: gi|147808028|emb|CAN77671.1| (hypothetical protein VITISV_019443 [Vitis vinifera])

HSP 1 Score: 401.4 bits (1030), Expect = 1.0e-108
Identity = 188/214 (87.85%), Postives = 200/214 (93.46%), Query Frame = 1 

Query: 1   MPVRV-ESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVRV E+S PS +SGA+P  T+P ACTLLSVGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRVVENSAPSQVSGANPGHTSPPACTLLSVGQAFSGTQNVSSLQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DL+HGYLCGTMEALNVPMADTPVVTFWEGEIVD KNY FFTGKW+A+PE+DIRHWTKFPS
Sbjct: 61  DLDHGYLCGTMEALNVPMADTPVVTFWEGEIVDAKNYTFFTGKWEASPEDDIRHWTKFPS 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           F+PL+ QVE DGGKSLDLSNY  IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGSIN
Sbjct: 121 FSPLVGQVEADGGKSLDLSNYQYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCNDGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214

[Close]
BLAST of CSPI04G14830 vs. NCBI nr
Match: gi|802615060|ref|XP_012074980.1| (PREDICTED: glucose-induced degradation protein 4 homolog [Jatropha curcas])

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-108
Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 1 

Query: 1   MPVR-VESSTPSLISGADPKQTTPQACTLLSVGQAFSGTQNVSNNQKDEAWRVNVRIQGL 60
           MPVR VE+S PS ISGA+  QT+P  CTLLSVGQAFSGTQNVS+ QKDEAWRVNVRIQG 
Sbjct: 1   MPVRIVETSAPSQISGANSGQTSPPFCTLLSVGQAFSGTQNVSSMQKDEAWRVNVRIQGC 60

Query: 61  DLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYNFFTGKWQAAPEEDIRHWTKFPS 120
           DL+HGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNY FFTGKW+A+PE+DIRHWTKFP 
Sbjct: 61  DLDHGYLCGTMEALNVPMADTPVVTFWEGEIVDGKNYTFFTGKWEASPEDDIRHWTKFPY 120

Query: 121 FAPLMNQVEVDGGKSLDLSNYPCIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSIN 180
           FAP   QVEVDGGKSLDLSNYP IFMRWKEQYFVNVGTDCGLTIAGFYYVCFSC+DGSIN
Sbjct: 121 FAPFSCQVEVDGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCADGSIN 180

Query: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214
           GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ
Sbjct: 181 GFYYDPNSSPFQKLELKSTNEGRSGFSFSSYELQ 214

The following BLAST results are available for this feature:
BLAST of CSPI04G14830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GID4_HUMAN1.4e-2534.74Glucose-induced degradation protein 4 homolog OS=Homo sapiens GN=GID4 PE=2 SV=1[more]
GID4_MOUSE4.1e-2535.68Glucose-induced degradation protein 4 homolog OS=Mus musculus GN=Gid4 PE=1 SV=1[more]
YG29_YEAST5.2e-1227.94Uncharacterized protein YGR066C OS=Saccharomyces cerevisiae (strain ATCC 204508 ... [more]
GID4_YEAST6.3e-1023.87Vacuolar import and degradation protein 24 OS=Saccharomyces cerevisiae (strain A... [more]
BLAST of CSPI04G14830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXJ4_CUCSA1.2e-124100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296220 PE=4 SV=1[more]
A5C6Z4_VITVI7.1e-10987.85Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019443 PE=4 SV=1[more]
A0A067KV08_JATCU9.2e-10988.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09107 PE=4 SV=1[more]
D7THK1_VITVI1.0e-10787.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00800 PE=4 SV=... [more]
A0A0J8F587_BETVU1.0e-10787.85Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g111500 PE=4 S... [more]
BLAST of CSPI04G14830 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37680.11.6e-10480.93 Vacuolar import/degradation protein Vid24 (InterPro:IPR018618)[more]
BLAST of CSPI04G14830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448610|ref|XP_004142059.1|1.7e-124100.00PREDICTED: glucose-induced degradation protein 4 homolog isoform X1 [Cucumis sat... [more]
gi|659069095|ref|XP_008448124.1|8.5e-12499.53PREDICTED: glucose-induced degradation protein 4 homolog isoform X1 [Cucumis mel... [more]
gi|659069097|ref|XP_008448129.1|2.0e-12098.12PREDICTED: glucose-induced degradation protein 4 homolog isoform X2 [Cucumis mel... [more]
gi|147808028|emb|CAN77671.1|1.0e-10887.85hypothetical protein VITISV_019443 [Vitis vinifera][more]
gi|802615060|ref|XP_012074980.1|1.3e-10888.79PREDICTED: glucose-induced degradation protein 4 homolog [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018618Vacuolar_import/degrad_Vid24
IPR018618Vacuolar_import/degrad_Vid24
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14830.2CSPI04G14830.2mRNA
CSPI04G14830.1CSPI04G14830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018618Vacuolar import/degradation protein Vid24PANTHERPTHR14534FAMILY NOT NAMEDcoord: 28..213
score: 6.5E
IPR018618Vacuolar import/degradation protein Vid24PFAMPF09783Vac_ImportDegcoord: 29..197
score: 1.2
NoneNo IPR availablePANTHERPTHR14534:SF4SUBFAMILY NOT NAMEDcoord: 28..213
score: 6.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G14830Cla018192Watermelon (97103) v1cpiwmB345
CSPI04G14830Csa4G296220Cucumber (Chinese Long) v2cpicuB181
CSPI04G14830MELO3C003145Melon (DHL92) v3.5.1cpimeB322
CSPI04G14830ClCG04G008030Watermelon (Charleston Gray)cpiwcgB316
CSPI04G14830Lsi01G014410Bottle gourd (USVL1VR-Ls)cpilsiB247
CSPI04G14830CsaV3_4G025180Cucumber (Chinese Long) v3cpicucB212
CSPI04G14830Cla97C04G074680Watermelon (97103) v2cpiwmbB307
CSPI04G14830Bhi03G001575Wax gourdcpiwgoB395
CSPI04G14830Cucsa.066360Cucumber (Gy14) v1cgycpiB055
CSPI04G14830CmoCh07G010500Cucurbita moschata (Rifu)cmocpiB856
CSPI04G14830Cp4.1LG19g03440Cucurbita pepo (Zucchini)cpecpiB497
CSPI04G14830CsGy4G014300Cucumber (Gy14) v2cgybcpiB170
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G14830Watermelon (97103) v2cpiwmbB280
CSPI04G14830Wax gourdcpiwgoB359
CSPI04G14830Wild cucumber (PI 183967)cpicpiB107
CSPI04G14830Wild cucumber (PI 183967)cpicpiB153
CSPI04G14830Cucumber (Gy14) v1cgycpiB257
CSPI04G14830Cucumber (Gy14) v1cgycpiB279
CSPI04G14830Cucurbita maxima (Rimu)cmacpiB266
CSPI04G14830Cucurbita maxima (Rimu)cmacpiB677
CSPI04G14830Cucurbita maxima (Rimu)cmacpiB852
CSPI04G14830Cucurbita maxima (Rimu)cmacpiB876
CSPI04G14830Cucurbita moschata (Rifu)cmocpiB254
CSPI04G14830Cucurbita moschata (Rifu)cmocpiB669
CSPI04G14830Cucurbita moschata (Rifu)cmocpiB834
CSPI04G14830Cucumber (Chinese Long) v2cpicuB178
CSPI04G14830Cucumber (Chinese Long) v2cpicuB191
CSPI04G14830Melon (DHL92) v3.5.1cpimeB264
CSPI04G14830Melon (DHL92) v3.5.1cpimeB288
CSPI04G14830Watermelon (Charleston Gray)cpiwcgB282
CSPI04G14830Watermelon (97103) v1cpiwmB292
CSPI04G14830Cucurbita pepo (Zucchini)cpecpiB065
CSPI04G14830Cucurbita pepo (Zucchini)cpecpiB621
CSPI04G14830Bottle gourd (USVL1VR-Ls)cpilsiB255
CSPI04G14830Bottle gourd (USVL1VR-Ls)cpilsiB276
CSPI04G14830Melon (DHL92) v3.6.1cpimedB260
CSPI04G14830Melon (DHL92) v3.6.1cpimedB282
CSPI04G14830Melon (DHL92) v3.6.1cpimedB313
CSPI04G14830Cucumber (Gy14) v2cgybcpiB124
CSPI04G14830Cucumber (Gy14) v2cgybcpiB220
CSPI04G14830Silver-seed gourdcarcpiB0613
CSPI04G14830Silver-seed gourdcarcpiB0970
CSPI04G14830Silver-seed gourdcarcpiB1037
CSPI04G14830Cucumber (Chinese Long) v3cpicucB209
CSPI04G14830Cucumber (Chinese Long) v3cpicucB232