CSPI04G14550 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G14550
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDof zinc finger protein
LocationChr4 : 12218651 .. 12220473 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACTTTCTCTCTCTCCTCTTTCTCTCTCTCTAATAACCCATCAAACTTTTACCAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAAAACCCTGAAGAACACACAATGGTATTTCCCCCCATCCCATCTAATTATCTTGATCCAACCACCCATCAATGGCAACAGGTAATCAATTTCATTTCTTAACTGATTCCTTCACTACAATTTTTTTCTTCTAAAATATGTTCTCATTTCAATATATATATTTTACTTCAACAGCAAACAACAAACCATCAATCTGGGAGTGGTACAATGATTGGAGGCAGCAGTTTTCAGCTGGCACCGTCGCCGCCATCGTCACAAGTTCGGCCTGGGTCGATGGCAGATCGAGCCCGGATGGCGAACCTGCCGGTGCCAGAGACAGCGTTGAAGTGTCCAAGATGTGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGCGGTGCCCTTCGAAGCGTCCCGGTCGGTGGAGGCTACCGCCGGAATAATAAACGAACTAAAAGTTCCTCAAAATCTCCTGTTAACTCTCAATGCCAACCTACTACTACTGGTACTTTCTTTTTCTTGTCTAACAAATTATATTAGAACTGATGGATGTGTTAAAATTATTGCTTAGATCTAAAAAGTTTAACTCTTTTAAATCACTATTTAGATTGTAATTTTTACTTTTTAATAAAAATACTACTATGAGCCTCTATTCAATTTCATATTTTTCACTTTTCTTGACCAACTTTTAGAATCTAAGTGAAAATTTGGTAATTAAAAAAAAGTAATTTTGTTTTTTAAAGTGAATTTTCGATTGTTAGCTAAAAAATAAACAACATAATCTTTTAATAAAATTTCTTTAGCTTTCAATTTTTTTTTTGGTTAATCTCAATATCTAACAAGAAATGAGAAATTAAGACCATGTTTTCTTAAGAATATTATAATATATATAATAATTTGTTATGTAATACATCTGATTTTATAATTTATAAACTATATGTGAAGTAAATATTTTGTAGGGTTTTTTAACTATGAAACTTTTAAAAACTTATATCAAATTAACCACAAATCCAATTTCAATTTATTTTTACATAAACTTTCAGAGCTTTCAGGAGGAGAAACAATGAGATCAAATTACAATAATGCCATTTCCATACCAAATGAAGGAGCTGTGGATTCAACTCATCATCATCATCCCATTGGGATATCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGACCACAGCTTCAACTTCACCAAACAACACACCCATCTCCGTTGCTCGCAAATTCAGCTCGGTTGCTAGGAAATGGTGGCATCAACTCATCCTTGAGCTATAGCATCGTCGGAGAGATTCAAAAGAAGATGGAAGCGACAACGACAACGACGAAAATGGAGGAAGATGGGCAACAAGTAGAGGTGAATGTGGGAAAGCCATTTTGGGGAGTCCTAGGAGGAAATGATAATCGCCATTATTGGAATGGTTTTAATCCTTCATCTTCCTCTTCTCATTCACAAGTATGAAAGCTTCATCAACATCGATCCTTTGATATAATCTTTTTCTAGGGCAAATTTAGGGTTCCATGTTGAAGAACTATTTTGAGTTAGTTTTTTTTTCTTTTTAATGTGAAGAGGGGTGATTCCATTAATGTTTTGTTAGATTGTTACTTTCGTAAAGTCTATGGTTTACGTGTAACACGTTTACTCACAAAAGATCTCGAGTGTAGATCTCTTGTGAGGAGATGGAGATGTTATG

mRNA sequence

ATGGTATTTCCCCCCATCCCATCTAATTATCTTGATCCAACCACCCATCAATGGCAACAGCAAACAACAAACCATCAATCTGGGAGTGGTACAATGATTGGAGGCAGCAGTTTTCAGCTGGCACCGTCGCCGCCATCGTCACAAGTTCGGCCTGGGTCGATGGCAGATCGAGCCCGGATGGCGAACCTGCCGGTGCCAGAGACAGCGTTGAAGTGTCCAAGATGTGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGCGGTGCCCTTCGAAGCGTCCCGGTCGGTGGAGGCTACCGCCGGAATAATAAACGAACTAAAAGTTCCTCAAAATCTCCTGTTAACTCTCAATGCCAACCTACTACTACTGAGCTTTCAGGAGGAGAAACAATGAGATCAAATTACAATAATGCCATTTCCATACCAAATGAAGGAGCTGTGGATTCAACTCATCATCATCATCCCATTGGGATATCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGACCACAGCTTCAACTTCACCAAACAACACACCCATCTCCGTTGCTCGCAAATTCAGCTCGGTTGCTAGGAAATGGTGGCATCAACTCATCCTTGAGCTATAGCATCGTCGGAGAGATTCAAAAGAAGATGGAAGCGACAACGACAACGACGAAAATGGAGGAAGATGGGCAACAAGTAGAGGTGAATGTGGGAAAGCCATTTTGGGGAGTCCTAGGAGGAAATGATAATCGCCATTATTGGAATGGTTTTAATCCTTCATCTTCCTCTTCTCATTCACAAGTATGA

Coding sequence (CDS)

ATGGTATTTCCCCCCATCCCATCTAATTATCTTGATCCAACCACCCATCAATGGCAACAGCAAACAACAAACCATCAATCTGGGAGTGGTACAATGATTGGAGGCAGCAGTTTTCAGCTGGCACCGTCGCCGCCATCGTCACAAGTTCGGCCTGGGTCGATGGCAGATCGAGCCCGGATGGCGAACCTGCCGGTGCCAGAGACAGCGTTGAAGTGTCCAAGATGTGAATCAACAAACACAAAGTTTTGTTACTTCAACAACTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGCCGCCGCTACTGGACCAGAGGCGGTGCCCTTCGAAGCGTCCCGGTCGGTGGAGGCTACCGCCGGAATAATAAACGAACTAAAAGTTCCTCAAAATCTCCTGTTAACTCTCAATGCCAACCTACTACTACTGAGCTTTCAGGAGGAGAAACAATGAGATCAAATTACAATAATGCCATTTCCATACCAAATGAAGGAGCTGTGGATTCAACTCATCATCATCATCCCATTGGGATATCCAACTTTTTAGGGTTTGATCAAATTCAATGGCGACCACAGCTTCAACTTCACCAAACAACACACCCATCTCCGTTGCTCGCAAATTCAGCTCGGTTGCTAGGAAATGGTGGCATCAACTCATCCTTGAGCTATAGCATCGTCGGAGAGATTCAAAAGAAGATGGAAGCGACAACGACAACGACGAAAATGGAGGAAGATGGGCAACAAGTAGAGGTGAATGTGGGAAAGCCATTTTGGGGAGTCCTAGGAGGAAATGATAATCGCCATTATTGGAATGGTTTTAATCCTTCATCTTCCTCTTCTCATTCACAAGTATGA
Homology
[Close]
BLAST of CSPI04G14550 vs. Swiss-Prot
Match: DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-39
Identity = 95/184 (51.63%), Postives = 117/184 (63.59%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAP--SPPSSQV------RPG 60
           MVF  +P N  D  +  WQQQ   HQ    T     +  L    SPP+SQV      R  
Sbjct: 1   MVFSSLPVNQFD--SQNWQQQGNQHQLECVTTDQNPNNYLRQLSSPPTSQVAGSSQARVN 60

Query: 61  SMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRS 120
           SM +RAR+A +P+PE AL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG+LR+
Sbjct: 61  SMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRN 120

Query: 121 VPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHH 177
           VPVGGG+RR NKR+KS SKS V      TT+  +   T R +Y+N     + G +   + 
Sbjct: 121 VPVGGGFRR-NKRSKSRSKSTVVVSTDNTTS--TSSLTSRPSYSNPSKFHSYGQIPEFNS 179

[Close]
BLAST of CSPI04G14550 vs. Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 91/178 (51.12%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 6   IPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARMANLPV 65
           +P + L P   Q   Q  +H +G+G +         P  P   +RPGSMA+RAR+AN+P+
Sbjct: 39  LPHHPLPPQQQQTPPQL-HHNNGNGGVA-------VPGGPGGLIRPGSMAERARLANIPL 98

Query: 66  PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKR 125
           PETALKCPRC+STNTKFCYFNNYSL+QPRHFCK CRRYWTRGGALRSVPVGGG RR NKR
Sbjct: 99  PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRR-NKR 158

Query: 126 TKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISNFLG 184
           TK+SS                GG T   N     S   + A  +  +HH    +N +G
Sbjct: 159 TKNSSGG-------------GGGSTSSGN-----SKSQDSATSNDQYHHRAMANNQMG 189

[Close]
BLAST of CSPI04G14550 vs. Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-36
Identity = 82/132 (62.12%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 17  QWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARMANLPVPETALKCPRCE 76
           Q Q Q   H +GSG   GG             +R GSM DRAR AN+ +PE ALKCPRCE
Sbjct: 45  QQQPQQQPHPNGSGGGGGGGG---------GSIRAGSMVDRARQANVALPEAALKCPRCE 104

Query: 77  STNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSSSKSPVNS 136
           STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR N+RTKS+S +  NS
Sbjct: 105 STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR-NRRTKSNSNNNNNS 164

Query: 137 QCQPTTTELSGG 149
                 T  S G
Sbjct: 165 TATSNNTSFSSG 166

[Close]
BLAST of CSPI04G14550 vs. Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29
Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 1 

Query: 13  PTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRP------------------GSM 72
           PT    Q    +  + +G++I G    L+   P  Q  P                  GSM
Sbjct: 2   PTNSNHQHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAGLPSRMGGSM 61

Query: 73  ADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVP 132
           A+RAR AN+P     LKCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALR+VP
Sbjct: 62  AERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVP 121

Query: 133 VGGGYRRNNKRTKS---SSKSPVNSQCQPTTTELSGGETMRSNY 156
           VGGG RRNNK+ K+    S S  + Q      +      +R+N+
Sbjct: 122 VGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNH 165

[Close]
BLAST of CSPI04G14550 vs. Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-29
Identity = 98/254 (38.58%), Postives = 127/254 (50.00%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTN-----HQ-SGSGTMIGGSS------FQLAPSPPSSQ 60
           MVF  + S++LDP  +  Q    N     HQ   +G+++ G        F   P+P    
Sbjct: 1   MVFSSV-SSFLDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHH 60

Query: 61  VRP------------GSMADRARMA-NLPVPETALKCPRCESTNTKFCYFNNYSLSQPRH 120
           V              G  A+RAR+A N   PE ALKCPRC+S NTKFCYFNNY+L+QPRH
Sbjct: 61  VETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRH 120

Query: 121 FCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNY 180
           FCK CRRYWTRGGALR+VPVGGG RRN K    +SKS  +SQ + +T+ +          
Sbjct: 121 FCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMV---------- 180

Query: 181 NNAISIPNEGAVDSTHHHHPIGISNFLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNG 230
            NA S  N   V    +             Q  + P LQ    T    +  N A + GN 
Sbjct: 181 -NATSPTNTSNVQLQTN------------SQFPFLPTLQ--NLTQLGGIGLNLAAINGNN 228

[Close]
BLAST of CSPI04G14550 vs. TrEMBL
Match: A0A0A0L265_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G295460 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 2.7e-164
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60
           MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM
Sbjct: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60

Query: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120
           ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR
Sbjct: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120

Query: 121 RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180
           RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN
Sbjct: 121 RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180

Query: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240
           FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT
Sbjct: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240

Query: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 285
           KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV
Sbjct: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 284

[Close]
BLAST of CSPI04G14550 vs. TrEMBL
Match: A0A067KKT8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09056 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 100/173 (57.80%), Postives = 120/173 (69.36%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPP------------SSQ 60
           MVF  IP+ YLDP    WQQQ  NH    GT  G ++ QL P PP            +  
Sbjct: 1   MVFSSIPA-YLDPAN--WQQQPNNHHQPGGTS-GANTHQLPPPPPPPPLPQPHGSGGAGS 60

Query: 61  VRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120
           +RPGSMADRAR+AN+P+PETALKCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG
Sbjct: 61  IRPGSMADRARLANIPMPETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 120

Query: 121 ALRSVPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISI 162
           ALR+VPVGGG RRN +   S+SKSPV+   +PT +  S   +  S  ++ + +
Sbjct: 121 ALRNVPVGGGCRRNKRSKGSNSKSPVSGD-RPTGSGSSSTVSSNSGTSDMLGL 168

[Close]
BLAST of CSPI04G14550 vs. TrEMBL
Match: G7JUJ4_MEDTR (Dof domain zinc finger protein OS=Medicago truncatula GN=MTR_4g022370 PE=4 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-43
Identity = 97/178 (54.49%), Postives = 118/178 (66.29%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPP------------SSQ 60
           MVF  IP+ YLD    Q QQQ  + Q G+G  +     Q    PP            +  
Sbjct: 1   MVFTSIPAAYLDAANWQQQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGS 60

Query: 61  VRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120
           +RPGSM+DRARMAN+P+PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG
Sbjct: 61  IRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120

Query: 121 ALRSVPVGGGYRRNNKRTKS-----SSKSPVNSQCQPTTTELSGGETMRSNYNNAISI 162
           ALR+VPVGGG+RRN + +KS     S+KSP +S  Q  +   +   T  +N +++  I
Sbjct: 121 ALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADI 178

[Close]
BLAST of CSPI04G14550 vs. TrEMBL
Match: B9HBK6_POPTR (Dof zinc finger protein DOF2.4 OS=Populus trichocarpa GN=POPTR_0006s08440g PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 111/235 (47.23%), Postives = 131/235 (55.74%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPP--------SSQVRPG 60
           M F  IP+ YLDP    WQQQ  NHQ+G  +          P PP        +  +RPG
Sbjct: 1   MDFSSIPA-YLDPAN--WQQQP-NHQTGVSSSTATQHLPPPPPPPPQPHGSGGAGSIRPG 60

Query: 61  SMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRS 120
           SMADRARMAN+P+PE ALKCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALRS
Sbjct: 61  SMADRARMANIPLPEPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRS 120

Query: 121 VPVGGGYRRNNKRTKSSSKSPVN-----SQCQPTTTELSGGETMRSNYNNAISIPNEGAV 180
           VPVGGG RRN +  +SSSKSP++       C  +T   + G +    +     +P    +
Sbjct: 121 VPVGGGCRRNKRSKESSSKSPISGYRQTGSCSSSTVSSNSGTS--DTFGLGPQVPPMRFM 180

Query: 181 DSTHHHHPIGISNF-LGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSL 222
              HHH      N  L +  +                    SA L GNGG   SL
Sbjct: 181 APLHHHTEFASGNIGLNYGALSKTLVGGASDLNFQMGSALASAGLGGNGGAGGSL 229

[Close]
BLAST of CSPI04G14550 vs. TrEMBL
Match: A0A067DW43_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017919mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.4e-42
Identity = 107/176 (60.80%), Postives = 120/176 (68.18%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQ-LAPSPPSSQ----------- 60
           MVF  IP+ YLDP    WQQQ  N Q+G+ T +     Q  AP PP  Q           
Sbjct: 1   MVFSSIPA-YLDPAN--WQQQP-NPQTGASTGVSTQFVQPQAPPPPPPQPHGSGGGGAGS 60

Query: 61  VRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120
           +RPGSMADRARMAN+P+PE ALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG
Sbjct: 61  IRPGSMADRARMANVPMPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120

Query: 121 ALRSVPVGGGYRRNNKRTK----SSSKSPVNSQCQPTTTELSGGETMRSNYNNAIS 161
           ALR+VPVGGG RR NKR+K     SSKSPVNS  + T +  +   TM  N +   S
Sbjct: 121 ALRNVPVGGGCRR-NKRSKGGSSGSSKSPVNSTDRQTASGNNSTSTMSCNNSGGAS 171

[Close]
BLAST of CSPI04G14550 vs. TAIR10
Match: AT5G02460.1 (AT5G02460.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-40
Identity = 91/178 (51.12%), Postives = 110/178 (61.80%), Query Frame = 1 

Query: 6   IPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARMANLPV 65
           +P + L P   Q   Q  +H +G+G +         P  P   +RPGSMA+RAR+AN+P+
Sbjct: 39  LPHHPLPPQQQQTPPQL-HHNNGNGGVA-------VPGGPGGLIRPGSMAERARLANIPL 98

Query: 66  PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKR 125
           PETALKCPRC+STNTKFCYFNNYSL+QPRHFCK CRRYWTRGGALRSVPVGGG RR NKR
Sbjct: 99  PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRR-NKR 158

Query: 126 TKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISNFLG 184
           TK+SS                GG T   N     S   + A  +  +HH    +N +G
Sbjct: 159 TKNSSGG-------------GGGSTSSGN-----SKSQDSATSNDQYHHRAMANNQMG 189

[Close]
BLAST of CSPI04G14550 vs. TAIR10
Match: AT2G37590.1 (AT2G37590.1 DNA binding with one finger 2.4)

HSP 1 Score: 155.2 bits (391), Expect = 5.9e-38
Identity = 82/132 (62.12%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 17  QWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARMANLPVPETALKCPRCE 76
           Q Q Q   H +GSG   GG             +R GSM DRAR AN+ +PE ALKCPRCE
Sbjct: 45  QQQPQQQPHPNGSGGGGGGGG---------GSIRAGSMVDRARQANVALPEAALKCPRCE 104

Query: 77  STNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSSSKSPVNS 136
           STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALR+VPVGGG RR N+RTKS+S +  NS
Sbjct: 105 STNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR-NRRTKSNSNNNNNS 164

Query: 137 QCQPTTTELSGG 149
                 T  S G
Sbjct: 165 TATSNNTSFSSG 166

[Close]
BLAST of CSPI04G14550 vs. TAIR10
Match: AT3G55370.3 (AT3G55370.3 OBF-binding protein 3)

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-37
Identity = 81/140 (57.86%), Postives = 100/140 (71.43%), Query Frame = 1 

Query: 43  SPPSSQV------RPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHF 102
           SPP+SQV      R  SM +RAR+A +P+PE AL CPRC+STNTKFCYFNNYSL+QPRHF
Sbjct: 88  SPPTSQVAGSSQARVNSMVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHF 147

Query: 103 CKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYN 162
           CKTCRRYWTRGG+LR+VPVGGG+RR NKR+KS SKS V      TT+  +   T R +Y+
Sbjct: 148 CKTCRRYWTRGGSLRNVPVGGGFRR-NKRSKSRSKSTVVVSTDNTTS--TSSLTSRPSYS 207

Query: 163 NAISIPNEGAVDSTHHHHPI 177
           N     + G +   + + PI
Sbjct: 208 NPSKFHSYGQIPEFNSNLPI 224

[Close]
BLAST of CSPI04G14550 vs. TAIR10
Match: AT1G07640.3 (AT1G07640.3 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 1 

Query: 7   PSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRP--------------- 66
           PSN+  PT    Q    +  + +G++I G    L+   P  Q  P               
Sbjct: 4   PSNWSQPTNSNHQHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAGLPS 63

Query: 67  ---GSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 126
              GSMA+RAR AN+P     LKCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GG
Sbjct: 64  RMGGSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGG 123

Query: 127 ALRSVPVGGGYRRNNKRTKS---SSKSPVNSQCQPTTTELSGGETMRSNY 156
           ALR+VPVGGG RRNNK+ K+    S S  + Q      +      +R+N+
Sbjct: 124 ALRNVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNH 173

[Close]
BLAST of CSPI04G14550 vs. TAIR10
Match: AT2G28810.1 (AT2G28810.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 98/254 (38.58%), Postives = 127/254 (50.00%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTN-----HQ-SGSGTMIGGSS------FQLAPSPPSSQ 60
           MVF  + S++LDP  +  Q    N     HQ   +G+++ G        F   P+P    
Sbjct: 1   MVFSSV-SSFLDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHH 60

Query: 61  VRP------------GSMADRARMA-NLPVPETALKCPRCESTNTKFCYFNNYSLSQPRH 120
           V              G  A+RAR+A N   PE ALKCPRC+S NTKFCYFNNY+L+QPRH
Sbjct: 61  VETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPRH 120

Query: 121 FCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNY 180
           FCK CRRYWTRGGALR+VPVGGG RRN K    +SKS  +SQ + +T+ +          
Sbjct: 121 FCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMV---------- 180

Query: 181 NNAISIPNEGAVDSTHHHHPIGISNFLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNG 230
            NA S  N   V    +             Q  + P LQ    T    +  N A + GN 
Sbjct: 181 -NATSPTNTSNVQLQTN------------SQFPFLPTLQ--NLTQLGGIGLNLAAINGNN 228

[Close]
BLAST of CSPI04G14550 vs. NCBI nr
Match: gi|778693389|ref|XP_004142206.2| (PREDICTED: dof zinc finger protein DOF3.6-like isoform X1 [Cucumis sativus])

HSP 1 Score: 585.9 bits (1509), Expect = 3.9e-164
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60
           MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM
Sbjct: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60

Query: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120
           ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR
Sbjct: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120

Query: 121 RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180
           RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN
Sbjct: 121 RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180

Query: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240
           FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT
Sbjct: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240

Query: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 285
           KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV
Sbjct: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 284

[Close]
BLAST of CSPI04G14550 vs. NCBI nr
Match: gi|778693393|ref|XP_011653621.1| (PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Cucumis sativus])

HSP 1 Score: 575.9 bits (1483), Expect = 4.0e-161
Identity = 281/284 (98.94%), Postives = 281/284 (98.94%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60
           MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM
Sbjct: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRARM 60

Query: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120
           ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR
Sbjct: 61  ANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYR 120

Query: 121 RNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180
           RNNKRTKSSSKSPVNSQCQPTTT   GGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN
Sbjct: 121 RNNKRTKSSSKSPVNSQCQPTTT---GGETMRSNYNNAISIPNEGAVDSTHHHHPIGISN 180

Query: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240
           FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT
Sbjct: 181 FLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEATTTTT 240

Query: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 285
           KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV
Sbjct: 241 KMEEDGQQVEVNVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 281

[Close]
BLAST of CSPI04G14550 vs. NCBI nr
Match: gi|659069014|ref|XP_008447721.1| (PREDICTED: dof zinc finger protein DOF5.1-like isoform X1 [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 6.6e-148
Identity = 270/291 (92.78%), Postives = 273/291 (93.81%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQT-TNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRAR 60
           MVFP IPSNYLDPTTHQWQQQT TNHQSGSGTMIGGSSFQLAPSPP SQVRPGSMADRAR
Sbjct: 1   MVFPSIPSNYLDPTTHQWQQQTATNHQSGSGTMIGGSSFQLAPSPPPSQVRPGSMADRAR 60

Query: 61  MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY 120
           MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY
Sbjct: 61  MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY 120

Query: 121 RRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDST----HHHHP 180
           RRNNKRTKSSSKSPVNSQCQPTTTE S GE MR NYNNAIS PNEGAVDST    HHHHP
Sbjct: 121 RRNNKRTKSSSKSPVNSQCQPTTTEPSAGEAMRLNYNNAISTPNEGAVDSTHHHHHHHHP 180

Query: 181 IGISNFLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEA 240
           IGISNFLGFDQIQWRPQLQLHQTT PS L+ANSARLLGNGGINSSLSYSIVGEIQKKM+A
Sbjct: 181 IGISNFLGFDQIQWRPQLQLHQTTQPSSLVANSARLLGNGGINSSLSYSIVGEIQKKMDA 240

Query: 241 TTTTTKMEEDGQQV-EV-NVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 285
             TTTKMEEDGQQV EV NVGKPFWGV+GGNDNRHYWNGFNPSSSSSHSQV
Sbjct: 241 --TTTKMEEDGQQVAEVNNVGKPFWGVVGGNDNRHYWNGFNPSSSSSHSQV 289

[Close]
BLAST of CSPI04G14550 vs. NCBI nr
Match: gi|659069016|ref|XP_008447730.1| (PREDICTED: dof zinc finger protein DOF5.1-like isoform X2 [Cucumis melo])

HSP 1 Score: 524.2 bits (1349), Expect = 1.4e-145
Identity = 268/291 (92.10%), Postives = 271/291 (93.13%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQT-TNHQSGSGTMIGGSSFQLAPSPPSSQVRPGSMADRAR 60
           MVFP IPSNYLDPTTHQWQQQT TNHQSGSGTMIGGSSFQLAPSPP SQVRPGSMADRAR
Sbjct: 1   MVFPSIPSNYLDPTTHQWQQQTATNHQSGSGTMIGGSSFQLAPSPPPSQVRPGSMADRAR 60

Query: 61  MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY 120
           MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY
Sbjct: 61  MANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGY 120

Query: 121 RRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISIPNEGAVDST----HHHHP 180
           RRNNKRTKSSSKSPVNSQCQPTTT    GE MR NYNNAIS PNEGAVDST    HHHHP
Sbjct: 121 RRNNKRTKSSSKSPVNSQCQPTTT---AGEAMRLNYNNAISTPNEGAVDSTHHHHHHHHP 180

Query: 181 IGISNFLGFDQIQWRPQLQLHQTTHPSPLLANSARLLGNGGINSSLSYSIVGEIQKKMEA 240
           IGISNFLGFDQIQWRPQLQLHQTT PS L+ANSARLLGNGGINSSLSYSIVGEIQKKM+A
Sbjct: 181 IGISNFLGFDQIQWRPQLQLHQTTQPSSLVANSARLLGNGGINSSLSYSIVGEIQKKMDA 240

Query: 241 TTTTTKMEEDGQQV-EV-NVGKPFWGVLGGNDNRHYWNGFNPSSSSSHSQV 285
             TTTKMEEDGQQV EV NVGKPFWGV+GGNDNRHYWNGFNPSSSSSHSQV
Sbjct: 241 --TTTKMEEDGQQVAEVNNVGKPFWGVVGGNDNRHYWNGFNPSSSSSHSQV 286

[Close]
BLAST of CSPI04G14550 vs. NCBI nr
Match: gi|802614942|ref|XP_012074917.1| (PREDICTED: dof zinc finger protein DOF2.4 isoform X2 [Jatropha curcas])

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 100/173 (57.80%), Postives = 120/173 (69.36%), Query Frame = 1 

Query: 1   MVFPPIPSNYLDPTTHQWQQQTTNHQSGSGTMIGGSSFQLAPSPP------------SSQ 60
           MVF  IP+ YLDP    WQQQ  NH    GT  G ++ QL P PP            +  
Sbjct: 1   MVFSSIPA-YLDPAN--WQQQPNNHHQPGGTS-GANTHQLPPPPPPPPLPQPHGSGGAGS 60

Query: 61  VRPGSMADRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGG 120
           +RPGSMADRAR+AN+P+PETALKCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG
Sbjct: 61  IRPGSMADRARLANIPMPETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGG 120

Query: 121 ALRSVPVGGGYRRNNKRTKSSSKSPVNSQCQPTTTELSGGETMRSNYNNAISI 162
           ALR+VPVGGG RRN +   S+SKSPV+   +PT +  S   +  S  ++ + +
Sbjct: 121 ALRNVPVGGGCRRNKRSKGSNSKSPVSGD-RPTGSGSSSTVSSNSGTSDMLGL 168

The following BLAST results are available for this feature:
BLAST of CSPI04G14550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF36_ARATH8.6e-3951.63Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2[more]
DOF51_ARATH1.1e-3851.12Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1[more]
DOF24_ARATH1.1e-3662.12Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1[more]
DOF11_ARATH2.1e-2943.90Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2[more]
DOF22_ARATH3.6e-2938.58Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2[more]
BLAST of CSPI04G14550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L265_CUCSA2.7e-164100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G295460 PE=4 SV=1[more]
A0A067KKT8_JATCU1.1e-4357.80Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09056 PE=4 SV=1[more]
G7JUJ4_MEDTR1.8e-4354.49Dof domain zinc finger protein OS=Medicago truncatula GN=MTR_4g022370 PE=4 SV=2[more]
B9HBK6_POPTR1.5e-4247.23Dof zinc finger protein DOF2.4 OS=Populus trichocarpa GN=POPTR_0006s08440g PE=4 ... [more]
A0A067DW43_CITSI3.4e-4260.80Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017919mg PE=4 SV=1[more]
BLAST of CSPI04G14550 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02460.16.4e-4051.12 Dof-type zinc finger DNA-binding family protein[more]
AT2G37590.15.9e-3862.12 DNA binding with one finger 2.4[more]
AT3G55370.36.6e-3757.86 OBF-binding protein 3[more]
AT1G07640.31.3e-3244.12 Dof-type zinc finger DNA-binding family protein[more]
AT2G28810.12.0e-3038.58 Dof-type zinc finger DNA-binding family protein[more]
BLAST of CSPI04G14550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778693389|ref|XP_004142206.2|3.9e-164100.00PREDICTED: dof zinc finger protein DOF3.6-like isoform X1 [Cucumis sativus][more]
gi|778693393|ref|XP_011653621.1|4.0e-16198.94PREDICTED: dof zinc finger protein DOF3.6-like isoform X2 [Cucumis sativus][more]
gi|659069014|ref|XP_008447721.1|6.6e-14892.78PREDICTED: dof zinc finger protein DOF5.1-like isoform X1 [Cucumis melo][more]
gi|659069016|ref|XP_008447730.1|1.4e-14592.10PREDICTED: dof zinc finger protein DOF5.1-like isoform X2 [Cucumis melo][more]
gi|802614942|ref|XP_012074917.1|1.5e-4357.80PREDICTED: dof zinc finger protein DOF2.4 isoform X2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G14550.1CSPI04G14550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 50..118
score: 8.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 69..124
score: 1.5
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 72..108
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 70..124
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 2..143
score: 5.8
NoneNo IPR availablePANTHERPTHR31992:SF13SUBFAMILY NOT NAMEDcoord: 2..143
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G14550Cla018219Watermelon (97103) v1cpiwmB345
CSPI04G14550Cla008250Watermelon (97103) v1cpiwmB305
CSPI04G14550Cla017890Watermelon (97103) v1cpiwmB292
CSPI04G14550Csa1G505950Cucumber (Chinese Long) v2cpicuB170
CSPI04G14550Csa4G295460Cucumber (Chinese Long) v2cpicuB181
CSPI04G14550Csa3G734310Cucumber (Chinese Long) v2cpicuB178
CSPI04G14550MELO3C013693Melon (DHL92) v3.5.1cpimeB266
CSPI04G14550MELO3C003121Melon (DHL92) v3.5.1cpimeB322
CSPI04G14550MELO3C009265Melon (DHL92) v3.5.1cpimeB288
CSPI04G14550ClCG10G021050Watermelon (Charleston Gray)cpiwcgB282
CSPI04G14550ClCG03G001610Watermelon (Charleston Gray)cpiwcgB307
CSPI04G14550ClCG04G008280Watermelon (Charleston Gray)cpiwcgB316
CSPI04G14550Lsi02G016510Bottle gourd (USVL1VR-Ls)cpilsiB267
CSPI04G14550Lsi03G021010Bottle gourd (USVL1VR-Ls)cpilsiB276
CSPI04G14550Lsi10G013670Bottle gourd (USVL1VR-Ls)cpilsiB246
CSPI04G14550Lsi01G014170Bottle gourd (USVL1VR-Ls)cpilsiB247
CSPI04G14550Lsi02G013640Bottle gourd (USVL1VR-Ls)cpilsiB271
CSPI04G14550MELO3C023853.2Melon (DHL92) v3.6.1cpimedB260
CSPI04G14550MELO3C013693.2Melon (DHL92) v3.6.1cpimedB262
CSPI04G14550MELO3C009265.2Melon (DHL92) v3.6.1cpimedB282
CSPI04G14550MELO3C021646.2Melon (DHL92) v3.6.1cpimedB259
CSPI04G14550CsaV3_3G034960Cucumber (Chinese Long) v3cpicucB209
CSPI04G14550CsaV3_1G034070Cucumber (Chinese Long) v3cpicucB201
CSPI04G14550CsaV3_4G024860Cucumber (Chinese Long) v3cpicucB212
CSPI04G14550CsaV3_5G026530Cucumber (Chinese Long) v3cpicucB231
CSPI04G14550CsaV3_5G008060Cucumber (Chinese Long) v3cpicucB232
CSPI04G14550Cla97C02G046240Watermelon (97103) v2cpiwmbB295
CSPI04G14550Cla97C10G204290Watermelon (97103) v2cpiwmbB280
CSPI04G14550Cla97C03G052540Watermelon (97103) v2cpiwmbB298
CSPI04G14550Cla97C04G074980Watermelon (97103) v2cpiwmbB307
CSPI04G14550Cla97C09G181350Watermelon (97103) v2cpiwmbB347
CSPI04G14550Bhi10G000554Wax gourdcpiwgoB393
CSPI04G14550Bhi11G001867Wax gourdcpiwgoB359
CSPI04G14550BhiUN66G19Wax gourdcpiwgoB416
CSPI04G14550Cucsa.175390Cucumber (Gy14) v1cgycpiB279
CSPI04G14550Cucsa.066100Cucumber (Gy14) v1cgycpiB055
CSPI04G14550Cucsa.165340Cucumber (Gy14) v1cgycpiB257
CSPI04G14550CmaCh07G009770Cucurbita maxima (Rimu)cmacpiB876
CSPI04G14550CmaCh14G001570Cucurbita maxima (Rimu)cmacpiB266
CSPI04G14550CmaCh03G004310Cucurbita maxima (Rimu)cmacpiB677
CSPI04G14550CmoCh03G004430Cucurbita moschata (Rifu)cmocpiB669
CSPI04G14550CmoCh07G010300Cucurbita moschata (Rifu)cmocpiB856
CSPI04G14550CmoCh14G001470Cucurbita moschata (Rifu)cmocpiB254
CSPI04G14550Cp4.1LG10g08680Cucurbita pepo (Zucchini)cpecpiB065
CSPI04G14550Cp4.1LG19g04430Cucurbita pepo (Zucchini)cpecpiB497
CSPI04G14550CsGy5G006970Cucumber (Gy14) v2cgybcpiB220
CSPI04G14550CsGy5G017230Cucumber (Gy14) v2cgybcpiB219
CSPI04G14550CsGy4G014030Cucumber (Gy14) v2cgybcpiB170
CSPI04G14550CsGy3G030220Cucumber (Gy14) v2cgybcpiB124
CSPI04G14550Carg13803Silver-seed gourdcarcpiB0970
CSPI04G14550Carg12556Silver-seed gourdcarcpiB1037
CSPI04G14550Carg24366Silver-seed gourdcarcpiB0511
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CSPI04G14550CSPI01G22950Wild cucumber (PI 183967)cpicpiB024
CSPI04G14550CSPI03G32370Wild cucumber (PI 183967)cpicpiB107
CSPI04G14550CSPI05G17610Wild cucumber (PI 183967)cpicpiB152
CSPI04G14550CSPI05G09640Wild cucumber (PI 183967)cpicpiB153
The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G14550Watermelon (Charleston Gray)cpiwcgB277
CSPI04G14550Cucumber (Chinese Long) v2cpicuB191
CSPI04G14550Cucumber (Chinese Long) v2cpicuB192
CSPI04G14550Cucumber (Chinese Long) v2cpicuB202
CSPI04G14550Melon (DHL92) v3.5.1cpimeB263
CSPI04G14550Melon (DHL92) v3.5.1cpimeB264
CSPI04G14550Watermelon (Charleston Gray)cpiwcgB304
CSPI04G14550Watermelon (97103) v1cpiwmB287
CSPI04G14550Watermelon (97103) v1cpiwmB354
CSPI04G14550Cucurbita pepo (Zucchini)cpecpiB281
CSPI04G14550Cucurbita pepo (Zucchini)cpecpiB621
CSPI04G14550Cucurbita pepo (Zucchini)cpecpiB729
CSPI04G14550Cucurbita pepo (Zucchini)cpecpiB873
CSPI04G14550Melon (DHL92) v3.6.1cpimedB313
CSPI04G14550Cucumber (Gy14) v2cgybcpiB280
CSPI04G14550Silver-seed gourdcarcpiB0184
CSPI04G14550Silver-seed gourdcarcpiB0339
CSPI04G14550Silver-seed gourdcarcpiB0367
CSPI04G14550Cucumber (Chinese Long) v3cpicucB243
CSPI04G14550Wax gourdcpiwgoB395
CSPI04G14550Wild cucumber (PI 183967)cpicpiB164
CSPI04G14550Cucurbita maxima (Rimu)cmacpiB555
CSPI04G14550Cucurbita maxima (Rimu)cmacpiB613
CSPI04G14550Cucurbita maxima (Rimu)cmacpiB852
CSPI04G14550Cucurbita moschata (Rifu)cmocpiB545
CSPI04G14550Cucurbita moschata (Rifu)cmocpiB605
CSPI04G14550Cucurbita moschata (Rifu)cmocpiB834