CSPI04G13690 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G13690
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr4 : 11653706 .. 11657053 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATCATATGACTGAAGATCCCCCAAAAGATGCAAAGCAGAAGAAGGATTGGCTTCGTGATGATGCCCGTTTATATCTTCAGATCAAGAATTCAATTGAGAGTGAGATAATTGGATTGGTTGATCACTGTGAGTCTGTTAAAGAACTTCTGGAATTTTTGGATTTTCTATATTCAGGTAAAGAATAAGTGCATAGAATGTTTGAAGTTTGTATGCAATTTTTTCATGCGGAACAGAAAGCTGAGAAAGCTGAGTCTGTCACCAGCTACTTTATGCGGCTTAAGAAGATCACTATCGAGCTTGGCTTGTTATTACCTTTTAGTCTTGATGTTAAAGTTCAATGAGAGAAGATGGTTGTTATTATTTTTCTGAATGGACTCTTACCTGAATTTGGAATGACAAAGACACAGATTCTCTCTGACTCCAAGATTCCATCATTAGATAATGCCTTCACTCGCGTCATTCGCATTGAAAGCTCTTCGACTGGTGTGTCTATTCCTCAACCCAGTAGTGCTATCTTTAGCAAGAACAATAACCATCGGGCACCTCAGAGGAATAGTATTGATCATCGAAAACCAGAGTTTGTAGAGATTGTTTGTAACTACTGTCGTAAGTCAGGCCATATGAAACATGATTGTCGGAAATTGCTATATAAGAATAGTCAACGATCTCAACATGCTCAGATAGCCTCCACATGCGATATACCAGAGGCGTCAGTTACTATTTCTGCAGATGAGTTTGCTAAGTTTCAGAATTACCAAGAGTCATTACAAGCGTCATCTTCCTCTACTCCGATTGCATCCACTGTTGCCCCAGGTAATATAAAGTGTCTTCTTACATCATCTACCAAATGGGTCATAGACTCTGGTGCCACAGCTCATATGACAGGTAATTCTCACCTATTTTCTAGACCGTTGTCCCCTGCCCCTTTCCCATCTGTTACATTGGCCGATGGCTCCACATCTTCTGTTCTTGGCTCTGGCACTATTCACCTTACCCCATCATTTTCTCTCTCTTCTGTGTTACATTTACCTAACTTATCCTTTAATTTAATTTCTACTAGTCAACTTACTCATGACCTAAATTGTGTTGTCATGTTCTTTTCTGGTTATTGCTTGTTTCAGGATCGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCAGGAGGCCTTTATCTCTTTGATCATCAAGTATCGCAAGCTGTGGCGTGTCCTGTCGTTCCCTCTCCTTTTGAAGTCCATTGTCGTTTAGGTCATCCATCTTTGTTTGTGTTGAAGAAACTTTATCCATAATTTAGGTATTTGTCCTCTTTAAATTGTGATTCATGTCAATTTGCTAAATTTCATCGTTTTAGTTTGAGTCTTCGAGTCGATAAACGAGCAATTGCTCCATTTGAGTTAGTTCATTCTGATATTTGGGGTCCGTGTCCAGTTGTATCTCAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTGTTATTCTGATATTTGGGGTCCGTGTCCAGTTGTATCTCAAACAGGCTTTCGTTATTTTGTTACTTTTGTTGACGATCATTCTCGTCTAACTTGGTTATATTTAATGAAAAATCGTTCTGAGTTATTATCTCATTTTTGTGCCTTTCATACTGAAATAAAAAACCAATATAACGTCTCTATCAAAACTTTGCGTACTGATAATGTGGGTGAATATTTTTCTCATTCTTTTGGCTCTTACTTGTGTGAAAATAGCATTATTCATCAGTCTTCCTGTGCTGACATTCCATCTCAAAATGGTGTTGCAGAGCGGAAAAGTAGGCATTTACTTGAAACTACCCGTGCTTTATCGTTTCAAATGCATGTTTCAAAAACCTTTTGCGTGGACGTTATCTCTACAGCTTGTTTTTTTATTAATAGAATGTCTTCCTCTGTTCTTAATGGTGAGATTCCCTATCGTGTTCTTTTTCCTACCAAGCATTTGTTTCCTATTGCTCCTAAGATATTTGGTTGTGTCTGTTTTGTTCGTGACGTTCGTCCTCATCATACTAAGTTAGATCCCAAATCCTTGAAGTGTATCTTCTTGGGTTATTCACGTGTTCAAAAGGGTTATCGTTGTTATTGTCCTACCCTTAAAAGGTATATGGTTTCGCCTGATTTTTTAGGATACACCATTTACTTCATTACCATCGAGTTCGTGTCAGGGGGAGGATGACAATCTTTTTATATATGAGGTTACCTCTCCCACACCATCCTTGTCTACTGATGTGCCTCCTTCCCGCCCGTTGATTTCTCAAGTCTACTCCCGACGACCTCCACCACAACCTTCAGACTCATGTCCTCCATCAATGCTTCCTTCATCATGTGATCCAGCGCCAAGTGATGATCTTCCCATTGCTCTTCGCAAAGGTAAACGCAAGTGTACTTACCCCGTTTCTTCCTTTATTTCCTATCACCAGTTATCTCCCTCCACATATGCGTTTATTACGTCTCTTGAGTCCACATCTATTCCTAACTCTGTTCATGAAGCTTTGTCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTGCTTTAGATGATAATGGTACTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCACTGGTTGTAAATGGGTGTTTGCTGTCAAGATGAATCCTGATGGAACAATGGCTCGATTAAAGGCTCGCCTTGTTGCCAAAGGTTATGCTCAAATCTATGGAACTGATTATTCATATACATACTCTCTGGTTGCCAAGTTAACTTCCATTCGCCTATTTCTTTTCATGGCTGCTACCAATAAATGGTCGTTGCATCAACTTGACATTAAGAATGTTTTTGTTCACGGTGATCTTCAAGAGGAAGTTTATATGGAACAACCACCAGGGTTTGTTGCTCAGTGGGAGAGTGATAAAGTATGTCGCCTTCGAAAATCTCTGTATGGTTTGAAACAGAGTCCTCGTGCGTGGTTTGGTAAGTTTAGTCAAGCCCTTGTATGCTTTGGTATGAAGAAGAGTACATCTGATCATTCAGTTTTCTATCGCCGATCTGAGAAGGGCATAGCTCTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATTGAGTATTTCGTGTCTCAAAACTTTCCTTCAGAGTCAGTTTTATACAAGAAAGGTATTTATTTGTCTCAACGAAAATATATACTTGATTTCTTGTCTGAAACAGGAAAATTAGGCGCCAAACCAAGTGGCACTCCAATGATGTCAAATCAGCAACTTGTTAAAGAAGAAGAATTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTTGA

mRNA sequence

ATGGATGATCATATGACTGAAGATCCCCCAAAAGATGCAAAGCAGAAGAAGGATTGGCTTCGTGATGATGCCCGTTTATATCTTCAGATCAAGAATTCAATTGAGAGTGAGATAATTGGATTGGTTGATCACTGTGAGTCTAAAGCTGAGAAAGCTGAGTCTGTCACCAGCTACTTTATGCGGCTTAAGAAGATCACTATCGAGCTTGGCTTGTTATTACCTTTTAGTCTTGATGTTAAAATTCCATCATTAGATAATGCCTTCACTCGCGTCATTCGCATTGAAAGCTCTTCGACTGGTGTGTCTATTCCTCAACCCAGTAGTGCTATCTTTAGCAAGAACAATAACCATCGGGCACCTCAGAGGAATAGTATTGATCATCGAAAACCAGAGTTTGTAGAGATTGTTTGTAACTACTGTCGTAAGTCAGGCCATATGAAACATGATTGTCGGAAATTGCTATATAAGAATAGTCAACGATCTCAACATGCTCAGATAGCCTCCACATGCGATATACCAGAGGCGTCAGTTACTATTTCTGCAGATGAGTTTGCTAAGTTTCAGAATTACCAAGAGTCATTACAAGCGTCATCTTCCTCTACTCCGATTGCATCCACTGTTGCCCCAGGTAATATAAAGTGTCTTCTTACATCATCTACCAAATGGGTCATAGACTCTGGTGCCACAGCTCATATGACAGGTAATTCTCACCTATTTTCTAGACCGTTGTCCCCTGCCCCTTTCCCATCTGTTACATTGGCCGATGGCTCCACATCTTCTGTTCTTGGCTCTGGCACTATTCACCTTACCCCATCATTTTCTCTCTCTTCTGATCGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCAGGAGGCCTTTATCTCTTTGATCATCAAGTATCGCAAGCTGTGGCGTGTCCTGTCGTTCCCTCTCCTTTTGAAGTCCATTGTCGTTTAGGTCATCCATCTTTTTTGAGTCTTCGAGTCGATAAACGAGCAATTGCTCCATTTGAGTTAGTTCATTCTGATATTTGGGGTCCGTGTCCAGTTTCTTCCTGTGCTGACATTCCATCTCAAAATGGTGTTGCAGAGCGGAAAAGTAGGCATTTACTTGAAACTACCCGTGCTTTATCGTTTCAAATGCATGTTTCAAAAACCTTTTGCGTGGACGTTATCTCTACAGCTTGTTTTTTTATTAATAGAATGTCTTCCTCTGTTCTTAATGGTGAGATTCCCTATCGTGTTCTTTTTCCTACCAAGCATTTGTTTCCTATTGCTCCTAAGATATTTGGTTGTGATACACCATTTACTTCATTACCATCGAGTTCGTGTCAGGGGGAGGATGACAATCTTTTTATATATGAGGTTACCTCTCCCACACCATCCTTGTCTACTGATGTGCCTCCTTCCCGCCCGTTGATTTCTCAAGTCTACTCCCGACGACCTCCACCACAACCTTCAGACTCATGTCCTCCATCAATGCTTCCTTCATCATGTGATCCAGCGCCAAGTGATGATCTTCCCATTGCTCTTCGCAAAGGTAAACGCAAGTGTACTTACCCCGTTTCTTCCTTTATTTCCTATCACCAGTTATCTCCCTCCACATATGCGTTTATTACGTCTCTTGAGTCCACATCTATTCCTAACTCTGTTCATGAAGCTTTGTCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTGCTTTAGATGATAATGGTACTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCACTGGTTGTAAATGGGTGTTTGCTGTCAAGATGAATCCTGATGGAACAATGGCTCGATTAAAGGCTCGCCTTGTTGCCAAAGGTTATGCTCAAATCTATGGAACTGATTATTCATATACATACTCTCTGGTTGCCAAGTTAACTTCCATTCGCCTATTTCTTTTCATGGCTGCTACCAATAAATGGTCGTTGCATCAACTTGACATTAAGAATGTTTTTGTTCACGGTGATCTTCAAGAGGAAGTTTATATGGAACAACCACCAGGGTTTGTTGCTCAGTGGGAGAGTGATAAAGTATGTCGCCTTCGAAAATCTCTGTATGGTTTGAAACAGAGTCCTCGTGCGTGGTTTGGTAAGTTTAGTCAAGCCCTTGTATGCTTTGGTATGAAGAAGAGTACATCTGATCATTCAGTTTTCTATCGCCGATCTGAGAAGGGCATAGCTCTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATTGAGAAAATTAGGCGCCAAACCAAGTGGCACTCCAATGATGTCAAATCAGCAACTTGTTAAAGAAGAAGAATTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTTGA

Coding sequence (CDS)

ATGGATGATCATATGACTGAAGATCCCCCAAAAGATGCAAAGCAGAAGAAGGATTGGCTTCGTGATGATGCCCGTTTATATCTTCAGATCAAGAATTCAATTGAGAGTGAGATAATTGGATTGGTTGATCACTGTGAGTCTAAAGCTGAGAAAGCTGAGTCTGTCACCAGCTACTTTATGCGGCTTAAGAAGATCACTATCGAGCTTGGCTTGTTATTACCTTTTAGTCTTGATGTTAAAATTCCATCATTAGATAATGCCTTCACTCGCGTCATTCGCATTGAAAGCTCTTCGACTGGTGTGTCTATTCCTCAACCCAGTAGTGCTATCTTTAGCAAGAACAATAACCATCGGGCACCTCAGAGGAATAGTATTGATCATCGAAAACCAGAGTTTGTAGAGATTGTTTGTAACTACTGTCGTAAGTCAGGCCATATGAAACATGATTGTCGGAAATTGCTATATAAGAATAGTCAACGATCTCAACATGCTCAGATAGCCTCCACATGCGATATACCAGAGGCGTCAGTTACTATTTCTGCAGATGAGTTTGCTAAGTTTCAGAATTACCAAGAGTCATTACAAGCGTCATCTTCCTCTACTCCGATTGCATCCACTGTTGCCCCAGGTAATATAAAGTGTCTTCTTACATCATCTACCAAATGGGTCATAGACTCTGGTGCCACAGCTCATATGACAGGTAATTCTCACCTATTTTCTAGACCGTTGTCCCCTGCCCCTTTCCCATCTGTTACATTGGCCGATGGCTCCACATCTTCTGTTCTTGGCTCTGGCACTATTCACCTTACCCCATCATTTTCTCTCTCTTCTGATCGTGTGACGAAGAAGATTATTGGTAGAGGATATGAGTCAGGAGGCCTTTATCTCTTTGATCATCAAGTATCGCAAGCTGTGGCGTGTCCTGTCGTTCCCTCTCCTTTTGAAGTCCATTGTCGTTTAGGTCATCCATCTTTTTTGAGTCTTCGAGTCGATAAACGAGCAATTGCTCCATTTGAGTTAGTTCATTCTGATATTTGGGGTCCGTGTCCAGTTTCTTCCTGTGCTGACATTCCATCTCAAAATGGTGTTGCAGAGCGGAAAAGTAGGCATTTACTTGAAACTACCCGTGCTTTATCGTTTCAAATGCATGTTTCAAAAACCTTTTGCGTGGACGTTATCTCTACAGCTTGTTTTTTTATTAATAGAATGTCTTCCTCTGTTCTTAATGGTGAGATTCCCTATCGTGTTCTTTTTCCTACCAAGCATTTGTTTCCTATTGCTCCTAAGATATTTGGTTGTGATACACCATTTACTTCATTACCATCGAGTTCGTGTCAGGGGGAGGATGACAATCTTTTTATATATGAGGTTACCTCTCCCACACCATCCTTGTCTACTGATGTGCCTCCTTCCCGCCCGTTGATTTCTCAAGTCTACTCCCGACGACCTCCACCACAACCTTCAGACTCATGTCCTCCATCAATGCTTCCTTCATCATGTGATCCAGCGCCAAGTGATGATCTTCCCATTGCTCTTCGCAAAGGTAAACGCAAGTGTACTTACCCCGTTTCTTCCTTTATTTCCTATCACCAGTTATCTCCCTCCACATATGCGTTTATTACGTCTCTTGAGTCCACATCTATTCCTAACTCTGTTCATGAAGCTTTGTCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTGCTTTAGATGATAATGGTACTTGGGATTTGGTATCTCGTCCTGCAGGAAAGAAGGCCACTGGTTGTAAATGGGTGTTTGCTGTCAAGATGAATCCTGATGGAACAATGGCTCGATTAAAGGCTCGCCTTGTTGCCAAAGGTTATGCTCAAATCTATGGAACTGATTATTCATATACATACTCTCTGGTTGCCAAGTTAACTTCCATTCGCCTATTTCTTTTCATGGCTGCTACCAATAAATGGTCGTTGCATCAACTTGACATTAAGAATGTTTTTGTTCACGGTGATCTTCAAGAGGAAGTTTATATGGAACAACCACCAGGGTTTGTTGCTCAGTGGGAGAGTGATAAAGTATGTCGCCTTCGAAAATCTCTGTATGGTTTGAAACAGAGTCCTCGTGCGTGGTTTGGTAAGTTTAGTCAAGCCCTTGTATGCTTTGGTATGAAGAAGAGTACATCTGATCATTCAGTTTTCTATCGCCGATCTGAGAAGGGCATAGCTCTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATTGAGAAAATTAGGCGCCAAACCAAGTGGCACTCCAATGATGTCAAATCAGCAACTTGTTAAAGAAGAAGAATTATGTAAAGATCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAGTGACTTGA
Homology
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BLAST of CSPI04G13690 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.9e-53
Identity = 153/442 (34.62%), Postives = 216/442 (48.87%), Query Frame = 1 

Query: 358  PSQNGVAERKSRHLLETTRALSFQMHVSKTFCVDVISTACFFINRMSSSVLNGEIPYRVL 417
            P  NGVAER +R ++E  R++     + K+F  + + TAC+ INR  S  L  EIP RV 
Sbjct: 579  PQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERV- 638

Query: 418  FPTKHLFPIAPKIFGCDTPFTSLPSSSCQGEDDN----LFI--------YEVTSPTPSL- 477
            +  K +     K+FGC   F  +P       DD     +FI        Y +  P     
Sbjct: 639  WTNKEVSYSHLKVFGCRA-FAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKV 698

Query: 478  ---------STDVPPSRPLISQVYSRRPP---PQPSDSCPPSMLPSSCD--------PAP 537
                      ++V  +  +  +V +   P     PS S  P+   S+ D        P  
Sbjct: 699  IRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGE 758

Query: 538  SDDLPIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLESTSI----------PNSVHE 597
              +    L +G  +  +P      +  L  S    + S    S           P S+ E
Sbjct: 759  VIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKE 818

Query: 598  ALSHP---RWQNAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKA 657
             LSHP   +   AM EEM +L  NGT+ LV  P GK+   CKWVF +K + D  + R KA
Sbjct: 819  VLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKA 878

Query: 658  RLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEV 717
            RLV KG+ Q  G D+   +S V K+TSIR  L +AA+    + QLD+K  F+HGDL+EE+
Sbjct: 879  RLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEI 938

Query: 718  YMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRR 753
            YMEQP GF    +   VC+L KSLYGLKQ+PR W+ KF   +      K+ SD  V+++R
Sbjct: 939  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 998

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BLAST of CSPI04G13690 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-35
Identity = 91/262 (34.73%), Postives = 136/262 (51.91%), Query Frame = 1 

Query: 501  DPAPSDDLPIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLES--TSIPNSVHEAL-- 560
            +P  +D + I  R+ +R  T P    ISY++   S    + +  +    +PNS  E    
Sbjct: 844  NPTKNDGIEIINRRSERLKTKPQ---ISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYR 903

Query: 561  -SHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVA 620
                 W+ A+  E+ A   N TW +  RP  K     +WVF+VK N  G   R KARLVA
Sbjct: 904  DDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVA 963

Query: 621  KGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQ 680
            +G+ Q Y  DY  T++ VA+++S R  L +       +HQ+D+K  F++G L+EE+YM  
Sbjct: 964  RGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRL 1023

Query: 681  PPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFY--RRSE 740
            P G      SD VC+L K++YGLKQ+ R WF  F QAL       S+ D  ++   + + 
Sbjct: 1024 PQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNI 1083

Query: 741  KGIALLVVYVDDIVITGNDALR 756
                 +++YVDD+VI   D  R
Sbjct: 1084 NENIYVLLYVDDVVIATGDMTR 1100

[Close]
BLAST of CSPI04G13690 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-17
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 1 

Query: 530 HQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKA 589
           ++L+P  Y+   +      P SV  AL  P W  AM EE+ AL  N TW LV  P  +  
Sbjct: 10  NKLNPK-YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNI 69

Query: 590 TGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMA 647
            GCKWVF  K++ DGT+ RLKARLVAKG+ Q  G  +  TYS V +  +IR  L +A
Sbjct: 70  LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of CSPI04G13690 vs. Swiss-Prot
Match: YG21B_YEAST (Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-GR1 PE=5 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-12
Identity = 61/198 (30.81%), Postives = 94/198 (47.47%), Query Frame = 1 

Query: 560  RWQNAMIEEMTALDDNGTWDLV-----SRPAGKKATGCKWVFAVKMNPDGTMARLKARLV 619
            R+  A  +E++ L    TWD       +    KK     ++F  K   DGT    KAR V
Sbjct: 1264 RYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKR--DGTH---KARFV 1323

Query: 620  AKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYME 679
            A+G  Q   T  S   S      ++   L +A  N + + QLDI + +++ D++EE+Y+ 
Sbjct: 1324 ARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIR 1383

Query: 680  QPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEK 739
             PP       +DK+ RLRKSLYGLKQS   W+      L+     +     S  ++ S+ 
Sbjct: 1384 PPPHLGL---NDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQV 1443

Query: 740  GIALLVVYVDDIVITGND 753
             I L   +VDD+++   D
Sbjct: 1444 TICL---FVDDMILFSKD 1450

[Close]
BLAST of CSPI04G13690 vs. Swiss-Prot
Match: YO22B_YEAST (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-OR2 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-12
Identity = 61/198 (30.81%), Postives = 94/198 (47.47%), Query Frame = 1 

Query: 560  RWQNAMIEEMTALDDNGTWDLV-----SRPAGKKATGCKWVFAVKMNPDGTMARLKARLV 619
            R+  A  +E++ L    TWD       +    KK     ++F  K   DGT    KAR V
Sbjct: 1264 RYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKR--DGTH---KARFV 1323

Query: 620  AKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYME 679
            A+G  Q   T  S   S      ++   L +A  N + + QLDI + +++ D++EE+Y+ 
Sbjct: 1324 ARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIR 1383

Query: 680  QPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEK 739
             PP       +DK+ RLRKSLYGLKQS   W+      L+     +     S  ++ S+ 
Sbjct: 1384 PPPHLGL---NDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQV 1443

Query: 740  GIALLVVYVDDIVITGND 753
             I L   +VDD+++   D
Sbjct: 1444 TICL---FVDDMILFSKD 1450

[Close]
BLAST of CSPI04G13690 vs. TrEMBL
Match: A5BI89_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001206 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 302/790 (38.23%), Postives = 408/790 (51.65%), Query Frame = 1 

Query: 81  IPSLDNAFTRVIRIESSS----TGVSIPQPSSAIFSKNNNHRAPQRNSIDHRKPEFVEIV 140
           I SL   F+RV+R E+ S    T V + +  +A  ++  N+R   R   +        IV
Sbjct: 187 IGSLQEVFSRVLRTENVSSSQHTNVLVAKGENAENARRVNNRGGNRAFENRGNDSSTTIV 246

Query: 141 CNYCRKSGHMKHDCRKLLYKNSQRSQHAQIAST-----CDIPEASVTISADEFAKFQNYQ 200
           C YC ++GH K +CRKL  +N +R Q A +A++      D     VT++A+EF+K+  YQ
Sbjct: 247 CFYCHEAGHTKKNCRKLQNRN-RRIQTANVATSDTATFSDSSNKIVTMTAEEFSKYSQYQ 306

Query: 201 ESLQASSSSTPIASTVAPGNIKCLLTSSTKWV---------------------------- 260
           ++L+AS   TP+++    G   CL++SS KW+                            
Sbjct: 307 DALKAS---TPVSALAESGKT-CLVSSSNKWIIDSGATDHMTGNHKTFSTFRTHSAPPVT 366

Query: 261 IDSGATAHMTGNSHLFSRPLSPAPFPSVTLADGSTSSVLGSG--------TIHLTPSFSL 320
           +  G+T  + G+  +  +P S     SV        +++           ++   P   +
Sbjct: 367 VADGSTYEIKGSGTV--KPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 426

Query: 321 SSDRVTKKIIGRGYESGGLYLFDHQVSQAVACPVVPSPFEVHCRLGHPSF---------- 380
             D +TK+  G+G+ S GLY+ D  V + VAC    SP E HCRLGHPS           
Sbjct: 427 FQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQF 486

Query: 381 --------------------LSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAE 440
                               L  R++KRA + FELVHSD+WGPCPV+S           +
Sbjct: 487 DTLPSLDCESCHFAKHHRSSLGPRLNKRAESLFELVHSDVWGPCPVTSQTGFRYFVTFVD 546

Query: 441 RKSRHLLETTRALSFQMHVSKTF--------------CVDVISTACFFINRMSSSVLNGE 500
             SR         SF+ +VS +F              CVD  S       R +  +L  E
Sbjct: 547 DFSRMTWYLFYEESFRKYVSNSFQNYMSXNGILHQTSCVDTPSQN-GVAERKNRHLL--E 606

Query: 501 IPYRVLFPTKHLFPIAPKIF-------GC-------------DTPFTSLPSSSCQGEDDN 560
               ++F  K      PK F        C             DT F S P+SS   ED+ 
Sbjct: 607 TARALMFQMK-----VPKQFWADAVSTACFLINRMPTVVLKEDTSFFSSPTSSASEEDEE 666

Query: 561 LFIYEVTS--PTPSLSTDVPPSRPLISQV------YSRRPPPQPSDSCPPSMLPSSCDPA 620
             +Y+V +  PT   S+ V     L+  +      ++  P  +P+       L SS +  
Sbjct: 667 WLVYQVVNSRPTVGQSSVVDSEXHLLCSLSGSCXFHNFLPASRPNHQL--FRLLSSSEFL 726

Query: 621 PSD-DLPIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQ 680
           P + DLPI+LRK                             +S S+P +V EAL+HP W+
Sbjct: 727 PVNLDLPISLRK-----------------------------DSISVPKTVTEALNHPGWK 786

Query: 681 NAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIY 740
           NAM+EE+ AL+DN TW LV  P GKK  GCKWVFAVK+NPDG++ARLKARLVA+GYAQ Y
Sbjct: 787 NAMLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTY 846

Query: 741 GTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQ 753
           G DYS T+S VAKL S+RLF+ +AA+ +W +HQLDIKN F+HGDL+EEVY+EQPPGFVAQ
Sbjct: 847 GVDYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQ 906

[Close]
BLAST of CSPI04G13690 vs. TrEMBL
Match: A0A061EWC9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024268 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.8e-115
Identity = 251/510 (49.22%), Postives = 314/510 (61.57%), Query Frame = 1 

Query: 313 PFEVHCRLGHPSFLSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAERKS---- 372
           PF  H RL   S    RV+KR ++ FELVHSD+WGPCP+ S +         +  S    
Sbjct: 106 PFAKHHRLPSVS----RVNKRVVSTFELVHSDVWGPCPIVSKSSFKYFATFVDDYSRVTW 165

Query: 373 RHLLETTRALSFQMHVSKTFCVDVISTACFFINRM--------------SSSVLNGEIPY 432
           R+L++    L F   +   FC ++ +    F++++              S  + NG +  
Sbjct: 166 RYLMKNHSKLFF---IFCAFCAEIKTQFNVFVHKLRIDNAKEYFFDKFQSYMIQNGILHQ 225

Query: 433 RVLFPTKHLFPIAPKIFGCDTPFTSLPSSSCQGEDDNLFIYEVT---SPTPSLSTDVPPS 492
                T     +A +       + S      QGE+D+L +Y +T   + T  L+TD  P+
Sbjct: 226 SSYIDTPSQNRVAERKINISLSYDS------QGEEDDLLVYTITHSVNTTDILATDPAPA 285

Query: 493 RPLISQVYSRRPPPQPSDSCP---PSMLPSSCDPAPSDDLPIALRKGKRKCTYPVSSFIS 552
           +P I  VYS+RP  Q +   P   PS L S+ D  PS  LPIALRKGK +CTYP+SSF+S
Sbjct: 286 QPPIVHVYSKRPEAQTTCPLPVPSPSDLVSN-DHEPSLHLPIALRKGKCQCTYPISSFVS 345

Query: 553 YHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKK 612
           Y  LS S+ +F+ SL+S SIP +VHEALSHP W+ AM+EEM ALD N TWD V  PAGKK
Sbjct: 346 YDHLSFSSGSFVASLDSISIPKTVHEALSHPGWRAAMVEEMVALDGNCTWDSVDLPAGKK 405

Query: 613 ATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAAT 672
           A GCKWV AVK++P+G++    A LVAKGYAQ Y  DY  T+S VAKLT +RLF+ M AT
Sbjct: 406 AIGCKWVLAVKVDPNGSV----ASLVAKGYAQTYSIDYFVTFSPVAKLTFVRLFISMVAT 465

Query: 673 NKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGK 732
             W LHQLDIKN F+HGDLQ+EVYMEQP G VAQ E  KVC L+K LYGLKQSPRAWFGK
Sbjct: 466 YDWPLHQLDIKNAFLHGDLQDEVYMEQPLGLVAQGEYGKVCHLQKCLYGLKQSPRAWFGK 525

Query: 733 FSQALVCFGMKKSTSDHSVFYRRSEKGIALLVVYVDDIVITGNDALRKLGAKPSGTPMMS 792
           FS+ +  FGMKKS  DHSVFY++SE GI LLVVYVDDIVITG+D                
Sbjct: 526 FSEVVQEFGMKKSKCDHSVFYKQSEAGIILLVVYVDDIVITGSD---------------- 577

Query: 793 NQQLVKEEELCKDPERYRRLVGKLNYLTVT 799
                 + EL +D E+YR LVGKLNYLTVT
Sbjct: 586 ----TADGELFEDSEKYRGLVGKLNYLTVT 577

[Close]
BLAST of CSPI04G13690 vs. TrEMBL
Match: A5BBZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021296 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.5e-111
Identity = 276/680 (40.59%), Postives = 367/680 (53.97%), Query Frame = 1 

Query: 137 CNYCRKSGHMKHDCRKLLYKNSQRSQHAQIASTCDIPEA-------SVTISADEFAKFQN 196
           C YC K GH +  C +L +    R+ H   +S    P+         +++   E+  +  
Sbjct: 71  CTYCNKLGHTRDRCYQL-HGRPPRTAHVVQSSDPQPPQPPSSSTSQGISLIDSEYDDYLR 130

Query: 197 YQESLQASSSSTPIASTVAPGNIKCLLTSSTK---WVIDSGATAHMTGNSHLFSRPLSPA 256
           YQ     ++ S  +AS    GN+   LT ++    W++DSGA+ H++GN  LFS   + +
Sbjct: 131 YQ-----ATKSAFVASIAQTGNVSACLTHTSSLGPWILDSGASDHISGNKDLFSSITTTS 190

Query: 257 PFPSVTLADGSTSSVLGSGTIHLTPSFSLSSDRVTKKIIGRGYESGGLYLFDHQVSQAVA 316
             P+VTLA+GS     G G  H  PS  L+SDR T K IG G ES GLY      + AV 
Sbjct: 191 ALPTVTLANGSQIVAKGIGLAHPLPSLPLTSDRSTGKTIGIGRESQGLYHLTSSSTPAVF 250

Query: 317 CPVVPSPFEVHCRLGHPSFLSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAER 376
                +P  +H RLGH S    +   + +  F  + S     C +     +     +  R
Sbjct: 251 IST-DAPLLIHNRLGHHSLSKFQ---KMVPRFSSLSSLACKSCQLGKHTHVSFPKRLNNR 310

Query: 377 KSRH--LLETTRALSFQMHVSKTFCVDVISTACFFINRMSSSVLNGEIPYRVLFPTKHLF 436
              H  L+ T   LS +            +T C F+    S +  G   YR      H +
Sbjct: 311 AKSHFELVHTDDKLSAK------------ATKCIFLGY--SRLQKG---YRCYSSETHRY 370

Query: 437 PIAPKI-FGCDTPFTSLPSSSCQGEDDNLFIYEVTSPTPSLST-DVPPSRPLISQVYSRR 496
            ++  + F  D+PF S   S        L I EV  P P +S  D  PSRPL  QV +  
Sbjct: 371 FLSADVTFFEDSPFFSTSES--------LPISEVL-PLPIISPPDAVPSRPL--QVLA-- 430

Query: 497 PPPQPSDSCP-PSMLPSSCDPAPSDDLPIALRKGKRKCT--YPVSSFISYHQLSPSTYAF 556
                 DS P PS  P+S  P PS +LPIA  KG R     +P+ +F+SYH+LS    AF
Sbjct: 431 ------DSLPIPSASPASALP-PSANLPIAFWKGNRSTRNPHPIYNFLSYHRLSSPYSAF 490

Query: 557 ITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVK 616
           ++++ S S+P S  EA+ HP W+  M++EM AL  N TWDLV  P+GK   GC+WV+ VK
Sbjct: 491 VSAISSVSLPKSTPEAIFHPDWRQTMVDEMIALHFNVTWDLVVLPSGKSTVGCRWVYTVK 550

Query: 617 MNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIK 676
           + PDG + RLK  LVAKGY Q+YG+DY  T+S VAK+ S+RL L MA    W L+QLDIK
Sbjct: 551 VGPDGQVDRLKGHLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAVMRSWPLYQLDIK 610

Query: 677 NVFVHGDLQEEVYMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMK 736
           N F+HGDL EEVYMEQPPGFVAQ ES  VCRLR+SLYGLKQSPRAWF +FS  +  F M 
Sbjct: 611 NAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFDMF 670

Query: 737 KSTSDHSVFYRRSEKGIALLVVYVDDIVITGNDALRKLGAKPSGTPMMSNQQLVK-EEEL 796
           +ST++HSVFY  +  G      Y  DI+    +    L  KP  TPM  N +L+  + E 
Sbjct: 671 RSTANHSVFYHHNSSG-----KYALDIL----EETGMLDCKPVDTPMDPNVKLIPGQGEP 694

Query: 797 CKDPERYRRLVGKLNYLTVT 799
            +DP RYRRLVGKLNYLT+T
Sbjct: 731 LRDPGRYRRLVGKLNYLTIT 694

[Close]
BLAST of CSPI04G13690 vs. TrEMBL
Match: B0FBS2_9ROSI (Putative uncharacterized protein OS=Vitis hybrid cultivar PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.7e-105
Identity = 204/361 (56.51%), Postives = 257/361 (71.19%), Query Frame = 1 

Query: 414  YRVLFPTKHLFPIAPKI-FGCDTPFTSLPSSSCQGEDDNLFIYEVTSPTP---------- 473
            YR   P  + + ++  + F  DT F S P+SS   ED+   +Y+V +  P          
Sbjct: 718  YRCFSPDLNKYLVSTDVVFSEDTSFFSSPTSSASEEDEEWLVYQVVNSRPTVGQSSVVDS 777

Query: 474  --SLSTDVP-------PSRPLISQVYSRRPPPQPSDSCPPSMLPSSCDPAPSDDLPIALR 533
              SL+   P       P++P I QVYSRRP    +D+CP +  PSS DP+   DLPI+LR
Sbjct: 778  DASLAPSGPVVHIPPAPAKPPIVQVYSRRPVT--TDTCP-APAPSSSDPSSDLDLPISLR 837

Query: 534  KGKRKCT--YPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTA 593
            KGKR C   Y +++F+SY  LS S+   + S++S S+P +V EAL+HP W+NAM+EE+ A
Sbjct: 838  KGKRHCKSIYSIANFVSYDHLSSSSSVLVASIDSISVPKTVTEALNHPGWKNAMLEEICA 897

Query: 594  LDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYS 653
            L+DN TW LV  P GKK  GCKWVFAVK+NPDG++ARLKARLVA+GYAQ YG DYS T+S
Sbjct: 898  LEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFS 957

Query: 654  LVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQWESDKVCRL 713
             VAKL S+RLF+ +AA+ +W +HQLDIKN F+HGDL+EEVY+EQPPGFVAQ E  KVCRL
Sbjct: 958  PVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRL 1017

Query: 714  RKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIALLVVYVDDIVITGN 753
            +K+LYGLKQSPRAWFGKFS+ +  FGM KS  DHSVFY++S  GI LLVVYVDDIVITGN
Sbjct: 1018 KKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYKKSAAGIILLVVYVDDIVITGN 1075

[Close]
BLAST of CSPI04G13690 vs. TrEMBL
Match: A5AFV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020608 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.7e-104
Identity = 224/456 (49.12%), Postives = 280/456 (61.40%), Query Frame = 1 

Query: 352 SSCADIPSQNGVAERKSRHLLETTRALSFQMHVSKTFCVDVISTACFFINRMSSSVLNG- 411
           SSCA  P QNG+AERK+RHL+ET R +    +V   F  D I TAC+ INRM SSVL+  
Sbjct: 532 SSCAHTPQQNGIAERKNRHLVETARTILLHSNVPFRFWGDAILTACYLINRMPSSVLHDQ 591

Query: 412 -----------------------------------------EIPYRVLFPTKHLFPIAPK 471
                                                    +  YR      H + I+  
Sbjct: 592 IPHFLPPRVFGCTCFVHILTPGQDKLFAKAMKCLFLGYSRLQKXYRCYSLETHRYFISAN 651

Query: 472 I-FGCDTPFTSLPSSSCQGEDDNLFIYEVTSPTPSLSTDVPPSRPLISQVYSRRP----- 531
           + F  D+PF S  S S       +    + SP+     DV P RPL  QVY RRP     
Sbjct: 652 VTFFEDSPFFSTTSESLPVS--KVLPLSIVSPS-----DVVPPRPL--QVYHRRPRVAAP 711

Query: 532 ---PPQPSDSCP-PSMLPSSCDPAPSDDLPIALRKGKR--KCTYPVSSFISYHQLSPSTY 591
                 P+DS P PS  P+   P+P DDLPIA+RKG R  +  +P+ +F+SYH+LS   +
Sbjct: 712 LPFAEAPADSLPIPSASPTPALPSP-DDLPIAIRKGTRFTRNPHPIYNFLSYHRLSSPYF 771

Query: 592 AFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFA 651
           AF++++   S+P S HEALSHP W+ AM++EM AL  NGTWDL+  P+GK   GC+WV+A
Sbjct: 772 AFVSTIFFVSLPKSTHEALSHPGWRQAMVDEMAALHSNGTWDLIVLPSGKSTVGCRWVYA 831

Query: 652 VKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLD 711
           VK+ PDG +  LKARLVAKGY Q+YG+DY  T+SLVAK+ S+RL L MAA   W L+QLD
Sbjct: 832 VKVGPDGQVDHLKARLVAKGYTQVYGSDYGDTFSLVAKIASVRLLLSMAAMCSWPLYQLD 891

Query: 712 IKNVFVHGDLQEEVYMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFG 753
           IKN F+HGDL EEVYMEQPPGFVAQ ES  VCRLR+SLYGLKQSPRAWFG+FS  +  FG
Sbjct: 892 IKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFGRFSSVVQEFG 951

[Close]
BLAST of CSPI04G13690 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 212.6 bits (540), Expect = 8.8e-55
Identity = 106/236 (44.92%), Postives = 155/236 (65.68%), Query Frame = 1 

Query: 521 YPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDL 580
           + +S F+SY ++SP  ++F+  +     P++ +EA     W  AM +E+ A++   TW++
Sbjct: 58  HDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEI 117

Query: 581 VSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIR 640
            + P  KK  GCKWV+ +K N DGT+ R KARLVAKGY Q  G D+  T+S V KLTS++
Sbjct: 118 CTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVK 177

Query: 641 LFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVA-QWES---DKVCRLRKSLY 700
           L L ++A   ++LHQLDI N F++GDL EE+YM+ PPG+ A Q +S   + VC L+KS+Y
Sbjct: 178 LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237

Query: 701 GLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIALLVVYVDDIVITGND 753
           GLKQ+ R WF KFS  L+ FG  +S SDH+ F + +      ++VYVDDI+I  N+
Sbjct: 238 GLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNN 293

[Close]
BLAST of CSPI04G13690 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 90.5 bits (223), Expect = 5.0e-18
Identity = 52/117 (44.44%), Postives = 67/117 (57.26%), Query Frame = 1 

Query: 530 HQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKA 589
           ++L+P  Y+   +      P SV  AL  P W  AM EE+ AL  N TW LV  P  +  
Sbjct: 10  NKLNPK-YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNI 69

Query: 590 TGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMA 647
            GCKWVF  K++ DGT+ RLKARLVAKG+ Q  G  +  TYS V +  +IR  L +A
Sbjct: 70  LGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of CSPI04G13690 vs. NCBI nr
Match: gi|147838854|emb|CAN63534.1| (hypothetical protein VITISV_001206 [Vitis vinifera])

HSP 1 Score: 441.8 bits (1135), Expect = 2.5e-120
Identity = 302/790 (38.23%), Postives = 408/790 (51.65%), Query Frame = 1 

Query: 81  IPSLDNAFTRVIRIESSS----TGVSIPQPSSAIFSKNNNHRAPQRNSIDHRKPEFVEIV 140
           I SL   F+RV+R E+ S    T V + +  +A  ++  N+R   R   +        IV
Sbjct: 187 IGSLQEVFSRVLRTENVSSSQHTNVLVAKGENAENARRVNNRGGNRAFENRGNDSSTTIV 246

Query: 141 CNYCRKSGHMKHDCRKLLYKNSQRSQHAQIAST-----CDIPEASVTISADEFAKFQNYQ 200
           C YC ++GH K +CRKL  +N +R Q A +A++      D     VT++A+EF+K+  YQ
Sbjct: 247 CFYCHEAGHTKKNCRKLQNRN-RRIQTANVATSDTATFSDSSNKIVTMTAEEFSKYSQYQ 306

Query: 201 ESLQASSSSTPIASTVAPGNIKCLLTSSTKWV---------------------------- 260
           ++L+AS   TP+++    G   CL++SS KW+                            
Sbjct: 307 DALKAS---TPVSALAESGKT-CLVSSSNKWIIDSGATDHMTGNHKTFSTFRTHSAPPVT 366

Query: 261 IDSGATAHMTGNSHLFSRPLSPAPFPSVTLADGSTSSVLGSG--------TIHLTPSFSL 320
           +  G+T  + G+  +  +P S     SV        +++           ++   P   +
Sbjct: 367 VADGSTYEIKGSGTV--KPTSSITLSSVLNLPNLAFNLISVSKLTKNLNCSVSFFPDHCV 426

Query: 321 SSDRVTKKIIGRGYESGGLYLFDHQVSQAVACPVVPSPFEVHCRLGHPSF---------- 380
             D +TK+  G+G+ S GLY+ D  V + VAC    SP E HCRLGHPS           
Sbjct: 427 FQDLMTKRTFGKGHVSDGLYILDEWVPRPVACVSTASPVEAHCRLGHPSLPVLKKLCPQF 486

Query: 381 --------------------LSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAE 440
                               L  R++KRA + FELVHSD+WGPCPV+S           +
Sbjct: 487 DTLPSLDCESCHFAKHHRSSLGPRLNKRAESLFELVHSDVWGPCPVTSQTGFRYFVTFVD 546

Query: 441 RKSRHLLETTRALSFQMHVSKTF--------------CVDVISTACFFINRMSSSVLNGE 500
             SR         SF+ +VS +F              CVD  S       R +  +L  E
Sbjct: 547 DFSRMTWYLFYEESFRKYVSNSFQNYMSXNGILHQTSCVDTPSQN-GVAERKNRHLL--E 606

Query: 501 IPYRVLFPTKHLFPIAPKIF-------GC-------------DTPFTSLPSSSCQGEDDN 560
               ++F  K      PK F        C             DT F S P+SS   ED+ 
Sbjct: 607 TARALMFQMK-----VPKQFWADAVSTACFLINRMPTVVLKEDTSFFSSPTSSASEEDEE 666

Query: 561 LFIYEVTS--PTPSLSTDVPPSRPLISQV------YSRRPPPQPSDSCPPSMLPSSCDPA 620
             +Y+V +  PT   S+ V     L+  +      ++  P  +P+       L SS +  
Sbjct: 667 WLVYQVVNSRPTVGQSSVVDSEXHLLCSLSGSCXFHNFLPASRPNHQL--FRLLSSSEFL 726

Query: 621 PSD-DLPIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQ 680
           P + DLPI+LRK                             +S S+P +V EAL+HP W+
Sbjct: 727 PVNLDLPISLRK-----------------------------DSISVPKTVTEALNHPGWK 786

Query: 681 NAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIY 740
           NAM+EE+ AL+DN TW LV  P GKK  GCKWVFAVK+NPDG++ARLKARLVA+GYAQ Y
Sbjct: 787 NAMLEEICALEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTY 846

Query: 741 GTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQ 753
           G DYS T+S VAKL S+RLF+ +AA+ +W +HQLDIKN F+HGDL+EEVY+EQPPGFVAQ
Sbjct: 847 GVDYSDTFSPVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQ 906

[Close]
BLAST of CSPI04G13690 vs. NCBI nr
Match: gi|590634785|ref|XP_007028466.1| (Uncharacterized protein TCM_024268 [Theobroma cacao])

HSP 1 Score: 424.1 bits (1089), Expect = 5.5e-115
Identity = 251/510 (49.22%), Postives = 314/510 (61.57%), Query Frame = 1 

Query: 313 PFEVHCRLGHPSFLSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAERKS---- 372
           PF  H RL   S    RV+KR ++ FELVHSD+WGPCP+ S +         +  S    
Sbjct: 106 PFAKHHRLPSVS----RVNKRVVSTFELVHSDVWGPCPIVSKSSFKYFATFVDDYSRVTW 165

Query: 373 RHLLETTRALSFQMHVSKTFCVDVISTACFFINRM--------------SSSVLNGEIPY 432
           R+L++    L F   +   FC ++ +    F++++              S  + NG +  
Sbjct: 166 RYLMKNHSKLFF---IFCAFCAEIKTQFNVFVHKLRIDNAKEYFFDKFQSYMIQNGILHQ 225

Query: 433 RVLFPTKHLFPIAPKIFGCDTPFTSLPSSSCQGEDDNLFIYEVT---SPTPSLSTDVPPS 492
                T     +A +       + S      QGE+D+L +Y +T   + T  L+TD  P+
Sbjct: 226 SSYIDTPSQNRVAERKINISLSYDS------QGEEDDLLVYTITHSVNTTDILATDPAPA 285

Query: 493 RPLISQVYSRRPPPQPSDSCP---PSMLPSSCDPAPSDDLPIALRKGKRKCTYPVSSFIS 552
           +P I  VYS+RP  Q +   P   PS L S+ D  PS  LPIALRKGK +CTYP+SSF+S
Sbjct: 286 QPPIVHVYSKRPEAQTTCPLPVPSPSDLVSN-DHEPSLHLPIALRKGKCQCTYPISSFVS 345

Query: 553 YHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKK 612
           Y  LS S+ +F+ SL+S SIP +VHEALSHP W+ AM+EEM ALD N TWD V  PAGKK
Sbjct: 346 YDHLSFSSGSFVASLDSISIPKTVHEALSHPGWRAAMVEEMVALDGNCTWDSVDLPAGKK 405

Query: 613 ATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAAT 672
           A GCKWV AVK++P+G++    A LVAKGYAQ Y  DY  T+S VAKLT +RLF+ M AT
Sbjct: 406 AIGCKWVLAVKVDPNGSV----ASLVAKGYAQTYSIDYFVTFSPVAKLTFVRLFISMVAT 465

Query: 673 NKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGK 732
             W LHQLDIKN F+HGDLQ+EVYMEQP G VAQ E  KVC L+K LYGLKQSPRAWFGK
Sbjct: 466 YDWPLHQLDIKNAFLHGDLQDEVYMEQPLGLVAQGEYGKVCHLQKCLYGLKQSPRAWFGK 525

Query: 733 FSQALVCFGMKKSTSDHSVFYRRSEKGIALLVVYVDDIVITGNDALRKLGAKPSGTPMMS 792
           FS+ +  FGMKKS  DHSVFY++SE GI LLVVYVDDIVITG+D                
Sbjct: 526 FSEVVQEFGMKKSKCDHSVFYKQSEAGIILLVVYVDDIVITGSD---------------- 577

Query: 793 NQQLVKEEELCKDPERYRRLVGKLNYLTVT 799
                 + EL +D E+YR LVGKLNYLTVT
Sbjct: 586 ----TADGELFEDSEKYRGLVGKLNYLTVT 577

[Close]
BLAST of CSPI04G13690 vs. NCBI nr
Match: gi|147798598|emb|CAN61219.1| (hypothetical protein VITISV_021296 [Vitis vinifera])

HSP 1 Score: 411.4 bits (1056), Expect = 3.7e-111
Identity = 276/680 (40.59%), Postives = 367/680 (53.97%), Query Frame = 1 

Query: 137 CNYCRKSGHMKHDCRKLLYKNSQRSQHAQIASTCDIPEA-------SVTISADEFAKFQN 196
           C YC K GH +  C +L +    R+ H   +S    P+         +++   E+  +  
Sbjct: 71  CTYCNKLGHTRDRCYQL-HGRPPRTAHVVQSSDPQPPQPPSSSTSQGISLIDSEYDDYLR 130

Query: 197 YQESLQASSSSTPIASTVAPGNIKCLLTSSTK---WVIDSGATAHMTGNSHLFSRPLSPA 256
           YQ     ++ S  +AS    GN+   LT ++    W++DSGA+ H++GN  LFS   + +
Sbjct: 131 YQ-----ATKSAFVASIAQTGNVSACLTHTSSLGPWILDSGASDHISGNKDLFSSITTTS 190

Query: 257 PFPSVTLADGSTSSVLGSGTIHLTPSFSLSSDRVTKKIIGRGYESGGLYLFDHQVSQAVA 316
             P+VTLA+GS     G G  H  PS  L+SDR T K IG G ES GLY      + AV 
Sbjct: 191 ALPTVTLANGSQIVAKGIGLAHPLPSLPLTSDRSTGKTIGIGRESQGLYHLTSSSTPAVF 250

Query: 317 CPVVPSPFEVHCRLGHPSFLSLRVDKRAIAPFELVHSDIWGPCPVSSCADIPSQNGVAER 376
                +P  +H RLGH S    +   + +  F  + S     C +     +     +  R
Sbjct: 251 IST-DAPLLIHNRLGHHSLSKFQ---KMVPRFSSLSSLACKSCQLGKHTHVSFPKRLNNR 310

Query: 377 KSRH--LLETTRALSFQMHVSKTFCVDVISTACFFINRMSSSVLNGEIPYRVLFPTKHLF 436
              H  L+ T   LS +            +T C F+    S +  G   YR      H +
Sbjct: 311 AKSHFELVHTDDKLSAK------------ATKCIFLGY--SRLQKG---YRCYSSETHRY 370

Query: 437 PIAPKI-FGCDTPFTSLPSSSCQGEDDNLFIYEVTSPTPSLST-DVPPSRPLISQVYSRR 496
            ++  + F  D+PF S   S        L I EV  P P +S  D  PSRPL  QV +  
Sbjct: 371 FLSADVTFFEDSPFFSTSES--------LPISEVL-PLPIISPPDAVPSRPL--QVLA-- 430

Query: 497 PPPQPSDSCP-PSMLPSSCDPAPSDDLPIALRKGKRKCT--YPVSSFISYHQLSPSTYAF 556
                 DS P PS  P+S  P PS +LPIA  KG R     +P+ +F+SYH+LS    AF
Sbjct: 431 ------DSLPIPSASPASALP-PSANLPIAFWKGNRSTRNPHPIYNFLSYHRLSSPYSAF 490

Query: 557 ITSLESTSIPNSVHEALSHPRWQNAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVK 616
           ++++ S S+P S  EA+ HP W+  M++EM AL  N TWDLV  P+GK   GC+WV+ VK
Sbjct: 491 VSAISSVSLPKSTPEAIFHPDWRQTMVDEMIALHFNVTWDLVVLPSGKSTVGCRWVYTVK 550

Query: 617 MNPDGTMARLKARLVAKGYAQIYGTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIK 676
           + PDG + RLK  LVAKGY Q+YG+DY  T+S VAK+ S+RL L MA    W L+QLDIK
Sbjct: 551 VGPDGQVDRLKGHLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAVMRSWPLYQLDIK 610

Query: 677 NVFVHGDLQEEVYMEQPPGFVAQWESDKVCRLRKSLYGLKQSPRAWFGKFSQALVCFGMK 736
           N F+HGDL EEVYMEQPPGFVAQ ES  VCRLR+SLYGLKQSPRAWF +FS  +  F M 
Sbjct: 611 NAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFDMF 670

Query: 737 KSTSDHSVFYRRSEKGIALLVVYVDDIVITGNDALRKLGAKPSGTPMMSNQQLVK-EEEL 796
           +ST++HSVFY  +  G      Y  DI+    +    L  KP  TPM  N +L+  + E 
Sbjct: 671 RSTANHSVFYHHNSSG-----KYALDIL----EETGMLDCKPVDTPMDPNVKLIPGQGEP 694

Query: 797 CKDPERYRRLVGKLNYLTVT 799
            +DP RYRRLVGKLNYLT+T
Sbjct: 731 LRDPGRYRRLVGKLNYLTIT 694

[Close]
BLAST of CSPI04G13690 vs. NCBI nr
Match: gi|659121366|ref|XP_008460624.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499401 [Cucumis melo])

HSP 1 Score: 407.9 bits (1047), Expect = 4.0e-110
Identity = 207/267 (77.53%), Postives = 224/267 (83.90%), Query Frame = 1 

Query: 443 SSCQGEDDNLFIYEVTSPTPSLSTDVPPSRPLISQVYSRRPPPQPSDSCPPSMLPSSCDP 502
           S  +GEDDNL  YE+TSPT     D P S PL S+VYSRRPP QPSDSCP SM PSSCD 
Sbjct: 319 SPFKGEDDNLCKYEITSPT-----DAPHSHPLPSRVYSRRPPSQPSDSCPTSMPPSSCDS 378

Query: 503 APSDDLPIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQ 562
            P DD+PIALRKGKR CTYPVSSF+SYHQLSP   AFIT L+S SIPN+VHEALSHP W+
Sbjct: 379 GPGDDIPIALRKGKRNCTYPVSSFVSYHQLSPPICAFITXLDSISIPNTVHEALSHPGWR 438

Query: 563 NAMIEEMTALDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIY 622
           N MIEEMTA DDNGT DLVS PAGKKA GCK VF++K+NPDGT+ARLKARLVAK YAQ Y
Sbjct: 439 NTMIEEMTAFDDNGTGDLVSXPAGKKAIGCKLVFSLKVNPDGTVARLKARLVAKDYAQTY 498

Query: 623 GTDYSYTYSLVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQ 682
           G DYS T+S VAKLTSIRLFL MAAT+ WSLHQLDIKN F+HGDLQEEVYMEQPP FVAQ
Sbjct: 499 GIDYSDTFSPVAKLTSIRLFLSMAATHNWSLHQLDIKNSFLHGDLQEEVYMEQPPXFVAQ 558

Query: 683 WESDKVCRLRKSLYGLKQSPRAWFGKF 710
            ESDK+CRLRKSLYGL+QSP AWFGKF
Sbjct: 559 GESDKLCRLRKSLYGLQQSPCAWFGKF 580

[Close]
BLAST of CSPI04G13690 vs. NCBI nr
Match: gi|163955688|gb|ABY49842.1| (hypothetical protein [Vitis hybrid cultivar])

HSP 1 Score: 390.6 bits (1002), Expect = 6.7e-105
Identity = 204/361 (56.51%), Postives = 257/361 (71.19%), Query Frame = 1 

Query: 414  YRVLFPTKHLFPIAPKI-FGCDTPFTSLPSSSCQGEDDNLFIYEVTSPTP---------- 473
            YR   P  + + ++  + F  DT F S P+SS   ED+   +Y+V +  P          
Sbjct: 718  YRCFSPDLNKYLVSTDVVFSEDTSFFSSPTSSASEEDEEWLVYQVVNSRPTVGQSSVVDS 777

Query: 474  --SLSTDVP-------PSRPLISQVYSRRPPPQPSDSCPPSMLPSSCDPAPSDDLPIALR 533
              SL+   P       P++P I QVYSRRP    +D+CP +  PSS DP+   DLPI+LR
Sbjct: 778  DASLAPSGPVVHIPPAPAKPPIVQVYSRRPVT--TDTCP-APAPSSSDPSSDLDLPISLR 837

Query: 534  KGKRKCT--YPVSSFISYHQLSPSTYAFITSLESTSIPNSVHEALSHPRWQNAMIEEMTA 593
            KGKR C   Y +++F+SY  LS S+   + S++S S+P +V EAL+HP W+NAM+EE+ A
Sbjct: 838  KGKRHCKSIYSIANFVSYDHLSSSSSVLVASIDSISVPKTVTEALNHPGWKNAMLEEICA 897

Query: 594  LDDNGTWDLVSRPAGKKATGCKWVFAVKMNPDGTMARLKARLVAKGYAQIYGTDYSYTYS 653
            L+DN TW LV  P GKK  GCKWVFAVK+NPDG++ARLKARLVA+GYAQ YG DYS T+S
Sbjct: 898  LEDNHTWKLVDLPQGKKVVGCKWVFAVKVNPDGSVARLKARLVARGYAQTYGVDYSDTFS 957

Query: 654  LVAKLTSIRLFLFMAATNKWSLHQLDIKNVFVHGDLQEEVYMEQPPGFVAQWESDKVCRL 713
             VAKL S+RLF+ +AA+ +W +HQLDIKN F+HGDL+EEVY+EQPPGFVAQ E  KVCRL
Sbjct: 958  PVAKLNSVRLFISIAASQQWMIHQLDIKNAFLHGDLEEEVYLEQPPGFVAQGEYGKVCRL 1017

Query: 714  RKSLYGLKQSPRAWFGKFSQALVCFGMKKSTSDHSVFYRRSEKGIALLVVYVDDIVITGN 753
            +K+LYGLKQSPRAWFGKFS+ +  FGM KS  DHSVFY++S  GI LLVVYVDDIVITGN
Sbjct: 1018 KKALYGLKQSPRAWFGKFSKEIQAFGMNKSEKDHSVFYKKSAAGIILLVVYVDDIVITGN 1075

The following BLAST results are available for this feature:
BLAST of CSPI04G13690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC5.9e-5334.62Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME1.1e-3534.73Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M820_ARATH8.9e-1744.44Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
YG21B_YEAST2.3e-1230.81Transposon Ty2-GR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YO22B_YEAST2.3e-1230.81Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of CSPI04G13690 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BI89_VITVI1.8e-12038.23Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001206 PE=4 SV=1[more]
A0A061EWC9_THECC3.8e-11549.22Uncharacterized protein OS=Theobroma cacao GN=TCM_024268 PE=4 SV=1[more]
A5BBZ3_VITVI2.5e-11140.59Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021296 PE=4 SV=1[more]
B0FBS2_9ROSI4.7e-10556.51Putative uncharacterized protein OS=Vitis hybrid cultivar PE=4 SV=1[more]
A5AFV0_VITVI6.7e-10449.12Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020608 PE=4 SV=1[more]
BLAST of CSPI04G13690 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.18.8e-5544.92 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.15.0e-1844.44ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
BLAST of CSPI04G13690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147838854|emb|CAN63534.1|2.5e-12038.23hypothetical protein VITISV_001206 [Vitis vinifera][more]
gi|590634785|ref|XP_007028466.1|5.5e-11549.22Uncharacterized protein TCM_024268 [Theobroma cacao][more]
gi|147798598|emb|CAN61219.1|3.7e-11140.59hypothetical protein VITISV_021296 [Vitis vinifera][more]
gi|659121366|ref|XP_008460624.1|4.0e-11077.53PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499401 [Cucumis me... [more]
gi|163955688|gb|ABY49842.1|6.7e-10556.51hypothetical protein [Vitis hybrid cultivar][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G13690.1CSPI04G13690.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 128..156
score: 6.9
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 336..419
score: 3.2
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 575..753
score: 2.4
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 216..798
score: 2.8E-161coord: 1..188
score: 2.8E
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 216..798
score: 2.8E-161coord: 1..188
score: 2.8E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 575..796
score: 8.0