CSPI04G11820 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G11820
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDynamin-related 3A-like protein
LocationChr4 : 10087128 .. 10087804 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAACCATACCAAACAGGAGATGCACAATGTCTTCATAAAAAAACTTTACAGGTAAGTAAGATTTGTAATTATTCTTTTTTGTAAAGTATATGAGATGCACATCTTCAGGTTTTGATCTTATACCAATTCTTTGATTTCAATGTGGGAAAATAGAGAAAACCTGTTTGAAGAGATGTTGCAGGAGCCCGATGAGGTGGCAATGAAGAGGAAGCACACGCGAGAAACCCTCCGAGTTCTACAGCAGGCTTTTCGGGTATGTATGTTTTTTGCTACACTCTGCAACCGTTCACAAATGGTGGTAGATTGGTGAAGCATGTATGAGTTTCACTGTCCAAGTTAGTTTTTTGTATGTACAAGGCGTTGCTTTGCTTCCAAAACTGAAAGAAACACTACTTTCTTATCTTATTTTTGTAGACGTTGGATGAATTGCCTTTGGAAGCGGAGTCGGTCGAGAGAGGTGATGATCCGACCGGATTACCGAGGATGCATGGAATGCCAACATCATCTGTGTATTCTACCATCAGTTCAAATGATTCATTCTCCCCTTCTTCCAAGAATCCTAAGCCGCGAAAGTCATCGTATTCAGGGGAGCTTCAGGTGCCGTTATACGGCAATTCAGATTCTAATGGGAACAGTCGATCATTCATGCCCAGCCTCTATCCAAAACTTGATCTA

mRNA sequence

GTTAACCATACCAAACAGGAGATGCACAATGTCTTCATAAAAAAACTTTACAGAGAAAACCTGTTTGAAGAGATGTTGCAGGAGCCCGATGAGGTGGCAATGAAGAGGAAGCACACGCGAGAAACCCTCCGAGTTCTACAGCAGGCTTTTCGGACGTTGGATGAATTGCCTTTGGAAGCGGAGTCGGTCGAGAGAGGTGATGATCCGACCGGATTACCGAGGATGCATGGAATGCCAACATCATCTGTGTATTCTACCATCAGTTCAAATGATTCATTCTCCCCTTCTTCCAAGAATCCTAAGCCGCGAAAGTCATCGTATTCAGGGGAGCTTCAGGTGCCGTTATACGGCAATTCAGATTCTAATGGGAACAGTCGATCATTCATGCCCAGCCTCTATCCAAAACTTGATCTA

Coding sequence (CDS)

GTTAACCATACCAAACAGGAGATGCACAATGTCTTCATAAAAAAACTTTACAGAGAAAACCTGTTTGAAGAGATGTTGCAGGAGCCCGATGAGGTGGCAATGAAGAGGAAGCACACGCGAGAAACCCTCCGAGTTCTACAGCAGGCTTTTCGGACGTTGGATGAATTGCCTTTGGAAGCGGAGTCGGTCGAGAGAGGTGATGATCCGACCGGATTACCGAGGATGCATGGAATGCCAACATCATCTGTGTATTCTACCATCAGTTCAAATGATTCATTCTCCCCTTCTTCCAAGAATCCTAAGCCGCGAAAGTCATCGTATTCAGGGGAGCTTCAGGTGCCGTTATACGGCAATTCAGATTCTAATGGGAACAGTCGATCATTCATGCCCAGCCTCTATCCAAAACTTGATCTA
Homology
[Close]
BLAST of CSPI04G11820 vs. Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 4.1e-26
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDE+A+KRK T+ETL VLQQA+RTLDELPLEA
Sbjct: 701 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDELPLEA 760

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYG 118
           +SV       G+ +   + TSS YST SS+ S SPS+     R+S  +G+     YG
Sbjct: 761 DSVS-----AGMSKHQELLTSSKYST-SSSYSASPST----TRRSRRAGDQHQNGYG 807

[Close]
BLAST of CSPI04G11820 vs. Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 9.4e-23
Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VN+TK+E+HNVFI+KLYRENL EE+L+EPDE+A+KRK T+ETLR+LQQA RTLDELPLEA
Sbjct: 685 VNYTKRELHNVFIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQANRTLDELPLEA 744

Query: 61  ESVERG 67
           ESVERG
Sbjct: 745 ESVERG 750

[Close]
BLAST of CSPI04G11820 vs. TrEMBL
Match: A0A0A0KZU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182230 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA
Sbjct: 5   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 64

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYGNSD 120
           ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPS KNPKPRKSSYSGELQVPLYGNSD
Sbjct: 65  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSPKNPKPRKSSYSGELQVPLYGNSD 124

Query: 121 SNGNSRSFMPSLYPKLDL 139
           SNGNSRSFMPSLYPKLDL
Sbjct: 125 SNGNSRSFMPSLYPKLDL 142

[Close]
BLAST of CSPI04G11820 vs. TrEMBL
Match: M5VIB3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001399mg PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-53
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDEVAMKRK TRETLRVLQQAFRTLDELPLEA
Sbjct: 697 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEVAMKRKRTRETLRVLQQAFRTLDELPLEA 756

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLY 120
           E+VE+    G DPTGLP++HG+PTSS+Y+T SSNDS+S S KNPKPRKSS+SGEL  P Y
Sbjct: 757 ETVEKGYSLGADPTGLPKIHGLPTSSMYNTSSSNDSYSASPKNPKPRKSSHSGELHSPFY 816

Query: 121 GNSDSNGNSRSFMPSLYPKLD 138
            N+DSNG+ R +MP LYP +D
Sbjct: 817 ANADSNGSGRMYMPGLYPSVD 837

[Close]
BLAST of CSPI04G11820 vs. TrEMBL
Match: A0A061E0U7_THECC (Dynamin-related protein 3A isoform 1 OS=Theobroma cacao GN=TCM_007356 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.7e-52
Identity = 111/143 (77.62%), Postives = 125/143 (87.41%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDE+A KRK TRETLRVLQQAFRTLDELPLEA
Sbjct: 685 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKRTRETLRVLQQAFRTLDELPLEA 744

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTIS-SNDSFSPSSKNPKPRKSSYSGELQVPL 120
           E+VER    G DPTGLP++HG+PTSS+YST S SNDS++ S KN K RKSS+SGELQ  L
Sbjct: 745 ETVERGYSLGSDPTGLPKIHGLPTSSMYSTSSGSNDSYAVSPKNTKSRKSSHSGELQSHL 804

Query: 121 YGNSDSNGNSRSFMPSLYPKLDL 139
           YGN+DSNG+ RSFMP LYP +DL
Sbjct: 805 YGNADSNGSGRSFMPGLYPTVDL 827

[Close]
BLAST of CSPI04G11820 vs. TrEMBL
Match: A0A061E114_THECC (Dynamin-related protein 3A isoform 2 OS=Theobroma cacao GN=TCM_007356 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.7e-52
Identity = 111/143 (77.62%), Postives = 125/143 (87.41%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDE+A KRK TRETLRVLQQAFRTLDELPLEA
Sbjct: 686 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKRTRETLRVLQQAFRTLDELPLEA 745

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTIS-SNDSFSPSSKNPKPRKSSYSGELQVPL 120
           E+VER    G DPTGLP++HG+PTSS+YST S SNDS++ S KN K RKSS+SGELQ  L
Sbjct: 746 ETVERGYSLGSDPTGLPKIHGLPTSSMYSTSSGSNDSYAVSPKNTKSRKSSHSGELQSHL 805

Query: 121 YGNSDSNGNSRSFMPSLYPKLDL 139
           YGN+DSNG+ RSFMP LYP +DL
Sbjct: 806 YGNADSNGSGRSFMPGLYPTVDL 828

[Close]
BLAST of CSPI04G11820 vs. TrEMBL
Match: A0A0B0MGJ3_GOSAR (Dynamin-related 3A-like protein OS=Gossypium arboreum GN=F383_19718 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.8e-50
Identity = 107/143 (74.83%), Postives = 123/143 (86.01%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLF+EMLQEPDE+A KRK TRETLRVLQ AFRTLDELPLEA
Sbjct: 643 VNHTKRELHNVFIKKLYRENLFQEMLQEPDEIASKRKRTRETLRVLQLAFRTLDELPLEA 702

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTIS-SNDSFSPSSKNPKPRKSSYSGELQVPL 120
           E+VER    G DPTGLP++HG+PTSS+YS  S SNDS++ SSKN KPRKS++SGELQ  L
Sbjct: 703 ETVERGYSLGSDPTGLPKIHGLPTSSMYSISSGSNDSYTASSKNLKPRKSAHSGELQSHL 762

Query: 121 YGNSDSNGNSRSFMPSLYPKLDL 139
           Y N+DSNGN R +MP LYP +DL
Sbjct: 763 YANADSNGNGRHYMPGLYPTVDL 785

[Close]
BLAST of CSPI04G11820 vs. TAIR10
Match: AT4G33650.2 (AT4G33650.2 dynamin-related protein 3A)

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-27
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDE+A+KRK T+ETL VLQQA+RTLDELPLEA
Sbjct: 702 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDELPLEA 761

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYG 118
           +SV       G+ +   + TSS YST SS+ S SPS+     R+S  +G+     YG
Sbjct: 762 DSVS-----AGMSKHQELLTSSKYST-SSSYSASPST----TRRSRRAGDQHQNGYG 808

[Close]
BLAST of CSPI04G11820 vs. TAIR10
Match: AT2G14120.3 (AT2G14120.3 dynamin related protein)

HSP 1 Score: 107.8 bits (268), Expect = 5.3e-24
Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VN+TK+E+HNVFI+KLYRENL EE+L+EPDE+A+KRK T+ETLR+LQQA RTLDELPLEA
Sbjct: 714 VNYTKRELHNVFIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQANRTLDELPLEA 773

Query: 61  ESVERG 67
           ESVERG
Sbjct: 774 ESVERG 779

[Close]
BLAST of CSPI04G11820 vs. NCBI nr
Match: gi|449459548|ref|XP_004147508.1| (PREDICTED: dynamin-related protein 3A [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA
Sbjct: 685 VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 744

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYGNSD 120
           ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPS KNPKPRKSSYSGELQVPLYGNSD
Sbjct: 745 ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSPKNPKPRKSSYSGELQVPLYGNSD 804

Query: 121 SNGNSRSFMPSLYPKLDL 139
           SNGNSRSFMPSLYPKLDL
Sbjct: 805 SNGNSRSFMPSLYPKLDL 822

[Close]
BLAST of CSPI04G11820 vs. NCBI nr
Match: gi|700198734|gb|KGN53892.1| (hypothetical protein Csa_4G182230 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA
Sbjct: 5   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 64

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYGNSD 120
           ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPS KNPKPRKSSYSGELQVPLYGNSD
Sbjct: 65  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSPKNPKPRKSSYSGELQVPLYGNSD 124

Query: 121 SNGNSRSFMPSLYPKLDL 139
           SNGNSRSFMPSLYPKLDL
Sbjct: 125 SNGNSRSFMPSLYPKLDL 142

[Close]
BLAST of CSPI04G11820 vs. NCBI nr
Match: gi|659108932|ref|XP_008454460.1| (PREDICTED: dynamin-related protein 3A-like [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 9.6e-68
Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA
Sbjct: 685 VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 744

Query: 61  ESVERGDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLYGNSD 120
           ESVERGDDPTGLPRMHGMPTSS+YST SSNDSFSPS KNPKPRKSSYSGELQVP+YGNSD
Sbjct: 745 ESVERGDDPTGLPRMHGMPTSSMYSTTSSNDSFSPSPKNPKPRKSSYSGELQVPVYGNSD 804

Query: 121 SNGNSRSFMPSLYPKLDL 139
           SNGN RSFMPSLYPKLDL
Sbjct: 805 SNGNGRSFMPSLYPKLDL 822

[Close]
BLAST of CSPI04G11820 vs. NCBI nr
Match: gi|645263445|ref|XP_008237240.1| (PREDICTED: dynamin-related protein 3A [Prunus mume])

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDEVAMKRK TRETLRVLQQAFRTLDELPLEA
Sbjct: 696 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEVAMKRKRTRETLRVLQQAFRTLDELPLEA 755

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLY 120
           E+VE+    G DPTGLP++HG+PTSS+Y+T SSNDS+S S KNPKPRKSS+SGEL  P Y
Sbjct: 756 ETVEKGYSLGADPTGLPKIHGLPTSSMYNTSSSNDSYSASPKNPKPRKSSHSGELHSPFY 815

Query: 121 GNSDSNGNSRSFMPSLYPKLD 138
            N+DSNG+ R +MP LYP +D
Sbjct: 816 ANADSNGSGRMYMPGLYPSVD 836

[Close]
BLAST of CSPI04G11820 vs. NCBI nr
Match: gi|595791833|ref|XP_007199665.1| (hypothetical protein PRUPE_ppa001399mg [Prunus persica])

HSP 1 Score: 216.9 bits (551), Expect = 2.3e-53
Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 1   VNHTKQEMHNVFIKKLYRENLFEEMLQEPDEVAMKRKHTRETLRVLQQAFRTLDELPLEA 60
           VNHTK+E+HNVFIKKLYRENLFEEMLQEPDEVAMKRK TRETLRVLQQAFRTLDELPLEA
Sbjct: 697 VNHTKRELHNVFIKKLYRENLFEEMLQEPDEVAMKRKRTRETLRVLQQAFRTLDELPLEA 756

Query: 61  ESVER----GDDPTGLPRMHGMPTSSVYSTISSNDSFSPSSKNPKPRKSSYSGELQVPLY 120
           E+VE+    G DPTGLP++HG+PTSS+Y+T SSNDS+S S KNPKPRKSS+SGEL  P Y
Sbjct: 757 ETVEKGYSLGADPTGLPKIHGLPTSSMYNTSSSNDSYSASPKNPKPRKSSHSGELHSPFY 816

Query: 121 GNSDSNGNSRSFMPSLYPKLD 138
            N+DSNG+ R +MP LYP +D
Sbjct: 817 ANADSNGSGRMYMPGLYPSVD 837

The following BLAST results are available for this feature:
BLAST of CSPI04G11820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRP3A_ARATH4.1e-2661.54Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2[more]
DRP3B_ARATH9.4e-2380.30Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2[more]
BLAST of CSPI04G11820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZU7_CUCSA1.2e-6999.28Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182230 PE=4 SV=1[more]
M5VIB3_PRUPE1.6e-5377.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001399mg PE=3 SV=1[more]
A0A061E0U7_THECC6.7e-5277.62Dynamin-related protein 3A isoform 1 OS=Theobroma cacao GN=TCM_007356 PE=3 SV=1[more]
A0A061E114_THECC6.7e-5277.62Dynamin-related protein 3A isoform 2 OS=Theobroma cacao GN=TCM_007356 PE=3 SV=1[more]
A0A0B0MGJ3_GOSAR4.8e-5074.83Dynamin-related 3A-like protein OS=Gossypium arboreum GN=F383_19718 PE=3 SV=1[more]
BLAST of CSPI04G11820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33650.22.3e-2761.54 dynamin-related protein 3A[more]
AT2G14120.35.3e-2480.30 dynamin related protein[more]
BLAST of CSPI04G11820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459548|ref|XP_004147508.1|1.7e-6999.28PREDICTED: dynamin-related protein 3A [Cucumis sativus][more]
gi|700198734|gb|KGN53892.1|1.7e-6999.28hypothetical protein Csa_4G182230 [Cucumis sativus][more]
gi|659108932|ref|XP_008454460.1|9.6e-6896.38PREDICTED: dynamin-related protein 3A-like [Cucumis melo][more]
gi|645263445|ref|XP_008237240.1|2.3e-5377.30PREDICTED: dynamin-related protein 3A [Prunus mume][more]
gi|595791833|ref|XP_007199665.1|2.3e-5377.30hypothetical protein PRUPE_ppa001399mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003130GED
IPR020850GED_dom
IPR022812Dynamin_SF
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G11820.1CSPI04G11820.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003130Dynamin GTPase effectorPFAMPF02212GEDcoord: 1..55
score: 3.7
IPR020850GTPase effector domainPROFILEPS51388GEDcoord: 1..61
score: 16
IPR022812Dynamin superfamilyPANTHERPTHR11566DYNAMINcoord: 1..77
score: 5.1
NoneNo IPR availablePANTHERPTHR11566:SF75DYNAMIN-RELATED PROTEIN 3A-RELATEDcoord: 1..77
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G11820Csa4G182230Cucumber (Chinese Long) v2cpicuB184
CSPI04G11820Bhi05G000781Wax gourdcpiwgoB387
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G11820Cucurbita pepo (Zucchini)cpecpiB225
CSPI04G11820Bottle gourd (USVL1VR-Ls)cpilsiB279
CSPI04G11820Melon (DHL92) v3.6.1cpimedB267
CSPI04G11820Melon (DHL92) v3.6.1cpimedB290
CSPI04G11820Cucumber (Gy14) v2cgybcpiB168
CSPI04G11820Silver-seed gourdcarcpiB0327
CSPI04G11820Cucumber (Chinese Long) v3cpicucB213
CSPI04G11820Cucumber (Chinese Long) v3cpicucB252
CSPI04G11820Watermelon (97103) v2cpiwmbB284
CSPI04G11820Wax gourdcpiwgoB361
CSPI04G11820Cucumber (Gy14) v1cgycpiB495
CSPI04G11820Cucurbita maxima (Rimu)cmacpiB343
CSPI04G11820Cucurbita moschata (Rifu)cmocpiB334
CSPI04G11820Cucurbita moschata (Rifu)cmocpiB515
CSPI04G11820Melon (DHL92) v3.5.1cpimeB296
CSPI04G11820Watermelon (Charleston Gray)cpiwcgB286
CSPI04G11820Watermelon (97103) v1cpiwmB298