CSPI04G11720 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G11720
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 10008302 .. 10008643 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTACTGGCCGCCGAGGCCACCAATTCCAATTCCAAATCCCAACGAAGAAAAGATTTTAAGTGGATCTAAATTGAAGCGCCATAGATTTGAATTTCAACTTCTCATCAACAAATTATTAAATACTGTTCGTGATTGGGAGTGTTCGAATCATTATAATTATTATACAGCGCTGCGGTTCCAAATTAGTTTCAACTCAACTCCCGAATCTGGCGTTGAGAAGGAAGCTTCCACGAAAGACCACAACCCGAACAAGTATTGTTTAATCCTTTCTGTCAATCATACGGCAATTATATATTACAGAAAATTCCACGCTGGTGTTGAGTTTTCTCTGTGA

mRNA sequence

ATGGGAAATTACTGGCCGCCGAGGCCACCAATTCCAATTCCAAATCCCAACGAAGAAAAGATTTTAAGTGGATCTAAATTGAAGCGCCATAGATTTGAATTTCAACTTCTCATCAACAAATTATTAAATACTGTTCGTGATTGGGAGTGTTCGAATCATTATAATTATTATACAGCGCTGCGGTTCCAAATTAGTTTCAACTCAACTCCCGAATCTGGCGTTGAGAAGGAAGCTTCCACGAAAGACCACAACCCGAACAAGTATTGTTTAATCCTTTCTGTCAATCATACGGCAATTATATATTACAGAAAATTCCACGCTGGTGTTGAGTTTTCTCTGTGA

Coding sequence (CDS)

ATGGGAAATTACTGGCCGCCGAGGCCACCAATTCCAATTCCAAATCCCAACGAAGAAAAGATTTTAAGTGGATCTAAATTGAAGCGCCATAGATTTGAATTTCAACTTCTCATCAACAAATTATTAAATACTGTTCGTGATTGGGAGTGTTCGAATCATTATAATTATTATACAGCGCTGCGGTTCCAAATTAGTTTCAACTCAACTCCCGAATCTGGCGTTGAGAAGGAAGCTTCCACGAAAGACCACAACCCGAACAAGTATTGTTTAATCCTTTCTGTCAATCATACGGCAATTATATATTACAGAAAATTCCACGCTGGTGTTGAGTTTTCTCTGTGA
Homology
[Close]
BLAST of CSPI04G11720 vs. TrEMBL
Match: A0A0A0KYG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179680 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL 60
           MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL
Sbjct: 1   MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL 60

Query: 61  RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL 114
           RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL
Sbjct: 61  RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL 113

[Close]
BLAST of CSPI04G11720 vs. NCBI nr
Match: gi|700198726|gb|KGN53884.1| (hypothetical protein Csa_4G179680 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1 

Query: 1   MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL 60
           MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL
Sbjct: 1   MGNYWPPRPPIPIPNPNEEKILSGSKLKRHRFEFQLLINKLLNTVRDWECSNHYNYYTAL 60

Query: 61  RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL 114
           RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL
Sbjct: 61  RFQISFNSTPESGVEKEASTKDHNPNKYCLILSVNHTAIIYYRKFHAGVEFSL 113

The following BLAST results are available for this feature:
BLAST of CSPI04G11720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G11720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYG3_CUCSA1.3e-61100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179680 PE=4 SV=1[more]
BLAST of CSPI04G11720 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G11720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198726|gb|KGN53884.1|1.9e-61100.00hypothetical protein Csa_4G179680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G11720.1CSPI04G11720.1mRNA