CSPI04G11620 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G11620
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 9944185 .. 9944367 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAATAAAAGTGATGACAGTGACCTACAACGAACTGAACTTATGTATCGACTGGCTCGACGAGCAACACAGGGACGCGCTGGATTTTGCCTCACCGAAATCCCATTTAATACCGTAGAAACTTCAATACAGCCCATGAATGAGATGGAACGCTGTATGAAACGGTTTCCAGTATCAAAA

mRNA sequence

ATGAATAATAAAAGTGATGACAGTGACCTACAACGAACTGAACTTATGTATCGACTGGCTCGACGAGCAACACAGGGACGCGCTGGATTTTGCCTCACCGAAATCCCATTTAATACCGTAGAAACTTCAATACAGCCCATGAATGAGATGGAACGCTGTATGAAACGGTTTCCAGTATCAAAA

Coding sequence (CDS)

ATGAATAATAAAAGTGATGACAGTGACCTACAACGAACTGAACTTATGTATCGACTGGCTCGACGAGCAACACAGGGACGCGCTGGATTTTGCCTCACCGAAATCCCATTTAATACCGTAGAAACTTCAATACAGCCCATGAATGAGATGGAACGCTGTATGAAACGGTTTCCAGTATCAAAA
Homology
[Close]
BLAST of CSPI04G11620 vs. TrEMBL
Match: A0A0A0KZS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179080 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MNNKSDDSDLQRTELMYRLARRATQGRAGFCLTEIPFNTVETSIQPMNEMERCMKRFPVS 60
          MNNKSDDSDLQRTELMYRLARRATQGR GFCLTEIPFNTVETSIQPMNEMERCMKRFPVS
Sbjct: 1  MNNKSDDSDLQRTELMYRLARRATQGRTGFCLTEIPFNTVETSIQPMNEMERCMKRFPVS 60

Query: 61 K 62
          K
Sbjct: 61 K 61

[Close]
BLAST of CSPI04G11620 vs. NCBI nr
Match: gi|700198714|gb|KGN53872.1| (hypothetical protein Csa_4G179080 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 4.0e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MNNKSDDSDLQRTELMYRLARRATQGRAGFCLTEIPFNTVETSIQPMNEMERCMKRFPVS 60
          MNNKSDDSDLQRTELMYRLARRATQGR GFCLTEIPFNTVETSIQPMNEMERCMKRFPVS
Sbjct: 1  MNNKSDDSDLQRTELMYRLARRATQGRTGFCLTEIPFNTVETSIQPMNEMERCMKRFPVS 60

Query: 61 K 62
          K
Sbjct: 61 K 61

The following BLAST results are available for this feature:
BLAST of CSPI04G11620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G11620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZS6_CUCSA2.8e-2698.36Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179080 PE=4 SV=1[more]
BLAST of CSPI04G11620 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G11620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198714|gb|KGN53872.1|4.0e-2698.36hypothetical protein Csa_4G179080 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G11620.1CSPI04G11620.1mRNA