CSPI04G11370 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G11370
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ribonuclease 3-like protein 2
Location	Chr4 : 9628919 .. 9632000 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTTAGCTCAACTGACACCTAAGCTCTTATGGACAAGAGGTTCTGAGTTCAAATTTCCAGCCCAGTATTTATTACAATACTTTTGCAAGCAAAAATATGTCAAGATTTAGAATTTCATAAGTTTATAACAGTAACAATAATAAGTTTATAACATCATCAAATGTATTGATGTGGACCTCTCTTTTTTTTTTGTTAGGATGCATTTTACCCAAATATACACAGAAATTCACCCCTTCCCTTCCACTCACTCAGCTCCCACCTGCGCCTCCTTCTCCATTCTTCAAACGATTCACAGTCCAACCACCGTCGCCGGCGTTTAAGGTCTGACCTAGAGAATCCTCCATGATAGCATTCTTTTTTCTTTTCCTTTCTTTTCTTTATTTTTTTTTATTGAGGAACTCCATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGGTGAGTTCTTAGTTACATTTGAAGTATGACTATTGTTACTTTATTAGCTGGGCACCAATTAGTTTTCTTTTCGTCTTCAATCTTTTGTAGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAAAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGGTAAATACTATATGATATTTGAGACGTTGCATACTTGCATTGTTTGGACTCTGAATTAGGAGGTAGTTTAGATGTTGTAGTTGTGGATTTTTCATTTACAAGTATGAACACTCTAACTTATATATCTGCTTTCTAACCAAGTGGGAAATTGAGTTCTTCAATAATTATGATGAAATGCACCTTTTTAGGCTTGCCTGCTTCAATTGTAGTCTTGTAATCTTATATCTTCACCAAACTACTTTCATTCTTTCTGTTCATGGACATGTTATTTTTTTCTCTCAAATTTTAAGATTCATTTTAGTTGTCAATACTCACCTGTTCTCTTTTTTGTTTTTTACAAGGCATGATGTTAGTTTCAGCAATGACATTGAACTATTCAGCTAAATTTGATGTTAATATATTTGTTAAATGGTAAAAAGAGAACACTAGGTTTACGTGAAAAACCTTAAAACAGGAAGAAAGAACCACGATAGAGAGTAACTTTTTATTATTTTCACACACATTGAAAGTTACAAGGGAAGATAACTTTAAAAGTTTTAGCAAGCATTAATACAAAAAAAGGAAATAAACTTAGGGTAAACTACAATATTAAAATACTCTCAACGCAATAAACTATCAACAAAGCCTCTTGTTTCCAACAATATCTATACACTGATTTGTTAAAACTTGTGTTCTTTTGAATCTCCACCCTCTGTGCAATATACTTTTACCTTGTATGAGTAAAACTACACAAACTTGGTTTGCTTCCTTTTACTTTTCCTTCTTAGATGTTGATTTTTTATGTGAATGAACTCTTGGATACCTGTTTGCATTATATCGAGTATTGTTTTAAAAGGTCTTCCTGGACACACGCCTAGGCTCAAGGATCAGGTCTGGCACATTTCTTTTCCAAGGTGACGCTCACAAAATAAGACGTACACCTTTTGTGAAGCCTCAAGGCTCCTTGGAAAGTAGTAATAATTAGAGTGTTTTCTTCTTTTTTAACTAAAAAATATATATTTAGTAAGGCTAAATGCAAATTTTATTTTGTTTGGAAGGTTTTTTTCTTTCATATTTTTGGTTCAACTCTGCTCTCTCCTGAATGTAATACTTTCATGTATATATTGTATGCTTAAAAAAATCCTCTTTTTTTTTCTTGAGTTTAAGCTCTAGAAGAATATTGCGCTTTTATTGCAAGTCATTTTTTGGGTCAGAAACAAAAGTTCAACGCAGATCATCTCCTTTTTCCAACGTGTTCAACCACTAAACACCTCATTGATTTCTTACTTGCAGTAAAGAAGTTCTTGGACGCCCACATGGAAGAAGATTTGTTTGCTGTGTAAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAATTTCTATATTATTCAATTGGGCATAATCTAGCATAACTGTATAGTAAGTTTATGCTTTCTGATGTCCTCATTTTCCTTGAATATCTTGGAGGTGGGTATGTTGTAAACCATGATTCTACTTGCATTTCTGAGTACAAGTTATTGTATCAAAATAAGTATTGGTTGCAATGTAAAATTCAAGGCAACCAGTTTAGGCTGTCATGATGTGTAAATGTAATCTATATTGTTTGAAAATAGACAAATTTTGGGATGTTATGATCGAATTGTACAATTGTTCCATAGTAGAATTGTACAATGTAAAATTGTTGATGC

mRNA sequence

ATGAGCTTAGCTCAACTGACACCTAAGCTCTTATGGACAAGAGGTTCTGAGTTCAAATTTCCAGCCCACTCCCACCTGCGCCTCCTTCTCCATTCTTCAAACGATTCACAGTCCAACCACCGTCGCCGGCGTTTAAGGAACTCCATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAAAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGTAAAGAAGTTCTTGGACGCCCACATGGAAGAAGATTTGTTTGCTGTGTAAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAA

Coding sequence (CDS)

ATGAGCTTAGCTCAACTGACACCTAAGCTCTTATGGACAAGAGGTTCTGAGTTCAAATTTCCAGCCCACTCCCACCTGCGCCTCCTTCTCCATTCTTCAAACGATTCACAGTCCAACCACCGTCGCCGGCGTTTAAGGAACTCCATGACACCAATTGAGCGCATACTATCTTATAAGTTTAAGAACAAGAAGCTGTTGGAAGAAGCCCTCACCCACTCCTCCTACCTCAACTCTCCCTCCTATGACCGCCTCGAGTTCATCGGAGATTCAGCTATTGGCCTCGCTATTTCCACTTACTTTTTTCCCCTTTATCCGGACCTCAATCAAGGCCAACTCACTTTACTTAGAGCTGCTAACGTTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCTCCATAGATTGTATAGTTATGTTAGACGCAACGCAGACGATCTTGATGATAATGTTAGAGAGTTTGCCGATGCCGTCGCTCTAGAAGACAACTCAATTCCCTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTGGCTGGTGCTATCTATGTAGATGTTGAGTTTGATCTTCAAAAACTATGGGCGATTATTAGGGGTTTGCTAGAGCCTATCTATACTCTTGAAGAGTTACAAGTAGAGCCCCAACCTGTAACTGTACTCTTTCAAGTTTGCCAAAGAAATGGAAAGCAGGTTGATATTAAGCATTGGAAAAACGGATCCAATAGCATCGCGAGTGTCTATGTTGATGGTAAATTTGTTGCTTCCGGCTCTTCAATGCAAAAAGAAATCGCAAGGCTCAATGCTGCCAAAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAGAATTAAAACATTTGTAACTATTGATGGTATTGATGGTTCGTTTGAAATTGAAGGGGCAAAGCAGAAGCTACATGATTTTTGTTGCAGGAAAAAGTGGCAGAGTCCAAGTTACAGTAAAGAAGTTCTTGGACGCCCACATGGAAGAAGATTTGTTTGCTGTGTAAAAATTTCCACTTTTAATGATACGCACTCTATAATCGGAGATGAGAAGTCAAGAGTAAAAGAGGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGATTTACAGAAAAGAAAGTATCTCTAA

Homology

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BLAST of CSPI04G11370 vs. Swiss-Prot
Match: RTL2_ARATH (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.5e-96
Identity = 188/337 (55.79%), Postives = 249/337 (73.89%), Query Frame = 1


Query: 48  SMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDL 107
           SM  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 108 NQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDN-SIPYG 167
               L+LLRAANVSTEKLARV++ H LYS++RRNA  LD+ V+EF++AV  ED+ S+ YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 168 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQ 227
           GLVKAPKVLAD+ ES+AGA+YVDV FDLQ+LW I RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 228 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDT 287
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AAKEAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 288 RIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGRPHGRRFVCCVKIS- 347
                + ID      ++  AK KL++ C +KKW  P YS +E      G+RFVC  KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 348 TFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           T   T  + GDE+S++K+AE+S+A  MIR L+K  YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of CSPI04G11370 vs. Swiss-Prot
Match: RTL2_ORYSJ (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 8.0e-64
Identity = 135/279 (48.39%), Postives = 186/279 (66.67%), Query Frame = 1


Query: 52  IERILSYKFKNKKLLEEALTHSSYLNSP-SYDRLEFIGDSAIGLAISTYFFPLYPDLNQG 111
           +ER+L Y+F++ +LLEEALTH S+ +   SY RLEF+GDSA+GLA S + +   P L  G
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPG 99

Query: 112 QLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALED----NSIPYG 171
            L+ LRAAN+STEKLARVAV H LY  +RRN   LD  V +F + V  E     +++PYG
Sbjct: 100 PLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYG 159

Query: 172 G-LVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLF 231
           G +VKAPKVLADIVE++A A+YVD +FDL+KLW + R L EPI T E   ++ QPVT+L 
Sbjct: 160 GSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLH 219

Query: 232 QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMD 291
           ++CQ++GK    K W+ G  ++ +V+V G+ V  GSS QK IA+LNAA++A  KL+ +  
Sbjct: 220 ELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKK 279

Query: 292 TRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 325
             + T V     D   E+   KQKL++ C R+ W  P +
Sbjct: 280 QVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKPIF 316

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BLAST of CSPI04G11370 vs. Swiss-Prot
Match: DCL1_ARATH (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-47
Identity = 127/347 (36.60%), Postives = 187/347 (53.89%), Query Frame = 1


Query: 52   IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 111
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1562 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1621

Query: 112  GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG--- 171
            G+LT LRAA V+ E  ARVAV H+L+ Y+R  +  L+  +REF   V  E +   +    
Sbjct: 1622 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1681

Query: 172  -GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLF 231
             G  KAPKVL DIVES+AGAI++D   D    W + + LL+P+ T E L +   PV  L 
Sbjct: 1682 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1741

Query: 232  QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMD 291
            + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AA+ AL  L +   
Sbjct: 1742 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1801

Query: 292  TRIKTFVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYSKEVLGRP- 351
               K     +G  G  + E              +Q L+D C RK W  PSY     G P 
Sbjct: 1802 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPA 1861

Query: 352  HGRRFVCCVKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 378
            H +RF   V+++T +   T   IG+    VK+A++SAA L++  L K
Sbjct: 1862 HAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of CSPI04G11370 vs. Swiss-Prot
Match: DCL1_ORYSJ (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.5e-46
Identity = 124/336 (36.90%), Postives = 190/336 (56.55%), Query Frame = 1


Query: 52   IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 111
            ++ +L  +F+NK LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y DL  
Sbjct: 1541 LKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPP 1600

Query: 112  GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALE-----DNSIP 171
            G+LT LRAA V+ E  ARVAV H+L+ ++R  +  L+  +REF   V  E      NS  
Sbjct: 1601 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFG 1660

Query: 172  YGGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVL 231
             G   KAPKVL DIVES+AGAI++D  +D   +W + + LL P+ T E L +   PV  L
Sbjct: 1661 LGDC-KAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVREL 1720

Query: 232  FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSM 291
             + CQ+  + ++ K  + G+ +   V+VDG  +    + QK++A+  AA+ AL+ L +  
Sbjct: 1721 QERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK- 1780

Query: 292  DTRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGRP-HGRRFVCCVKI 351
            +T  K     DG   +      +Q L+D C R++W  P Y     G P H +RFV  V++
Sbjct: 1781 ETATKKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRV 1840

Query: 352  STFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 378
            +T +   T   IG+    VK+A++SAA L++  L +
Sbjct: 1841 NTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 1872

[Close]

BLAST of CSPI04G11370 vs. Swiss-Prot
Match: RTL3_ARATH (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-43
Identity = 105/270 (38.89%), Postives = 170/270 (62.96%), Query Frame = 1


Query: 47  NSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPD 106
           +S+  +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP 
Sbjct: 413 SSVEAVEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPM 472

Query: 107 LNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG 166
           L    L++LR AN   +K A VAV   +Y     +    +    +F + +  ED+  PY 
Sbjct: 473 LEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--PY- 532

Query: 167 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVE-PQPVTVLF 226
            +VKAPK+L +++  VAGA+Y+DV++++Q+L  I R LLEPIYTL++L+++  QP  +LF
Sbjct: 533 RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLF 592

Query: 227 QVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDS 286
           ++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA+EA+ KLS+ 
Sbjct: 593 RLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC 652

Query: 287 MDTRIKTFVTIDGIDGSFEIEGAKQKLHDF 314
           M   I+  +  D +DG     G+   L  F
Sbjct: 653 MP--IEKIIHQDNLDGEVIQTGSSSLLTAF 674

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BLAST of CSPI04G11370 vs. TrEMBL
Match: A0A0A0L1E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.7e-142
Identity = 264/338 (78.11%), Postives = 295/338 (87.28%), Query Frame = 1


Query: 45  LRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLY 104
           + +S+  +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 105 PDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP 164
           P L+QG L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+P
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 165 YGGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVL 224
           YGG++KAPKVLADIVESVAGA+YVDV FDLQKLW IIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 225 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSM 284
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAA+EALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 285 DTRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGRPHGRRFVCCVKI 344
           DTRIKTFVTIDGID SFEIEGAKQKLHD C ++KWQ P+YS E  LG  H R FVC VKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 345 STFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           +T   T  I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11370 vs. TrEMBL
Match: A0A0A0L020_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192730 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.4e-128
Identity = 239/276 (86.59%), Postives = 254/276 (92.03%), Query Frame = 1


Query: 49  MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 108
           MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN
Sbjct: 1   MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 60

Query: 109 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGL 168
           QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPY GL
Sbjct: 61  QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYVGL 120

Query: 169 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVC 228
           VKAPKVLADIVESVAGAIYVDVEFDLQKLWAII+  L+PIYT E+L+ +PQPVT+LF+ C
Sbjct: 121 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLLFEDC 180

Query: 229 QRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDTRI 288
           Q+ GKQV I++ + GS  +A VYVD + VASG S QK IARLNAA+EALI LSDS DT+I
Sbjct: 181 QKKGKQVHIENQEKGSTYVAKVYVDCRPVASGFSKQKPIARLNAAREALIILSDSTDTKI 240

Query: 289 KTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 325
           K  VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY
Sbjct: 241 KRVVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSY 276

[Close]

BLAST of CSPI04G11370 vs. TrEMBL
Match: A0A061F5X1_THECC (Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.2e-114
Identity = 223/361 (61.77%), Postives = 271/361 (75.07%), Query Frame = 1


Query: 22  AHSHLRLLLHSSNDSQSNHRRRRLRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSY 81
           +++H      SS+ S S+     +  S+  +ERIL+Y F+NK+LLEEALTHSSY +S SY
Sbjct: 24  SYNHFTTTTTSSSSSPSSD----MEASIAAVERILNYSFRNKRLLEEALTHSSYSDSTSY 83

Query: 82  DRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRN 141
            RLEF+GD+A+GLA++ + F  YP+L+ G L+L+RAAN+STEKLARVA+ HRL+ +VR N
Sbjct: 84  QRLEFVGDAALGLALTNHVFLAYPELDPGLLSLIRAANISTEKLARVAIKHRLFQFVRHN 143

Query: 142 ADDLDDNVREFADAVALEDNSIPYGGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAII 201
           A  L+D VREFA  V+ ED+ + YGG +KAPKVLADIVESVA A+YVDV FDL KLW II
Sbjct: 144 ATSLEDKVREFAKVVSQEDDPVSYGGSMKAPKVLADIVESVAAAVYVDVNFDLSKLWVII 203

Query: 202 RGLLEPIYTLEELQVEPQPVTVLFQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGS 261
           RGLLEPI TLE+LQ +PQPVTVLF+ CQ+ GK VDIKHWK G  ++ASVYVDG FVASGS
Sbjct: 204 RGLLEPIVTLEDLQQQPQPVTVLFEFCQKQGKHVDIKHWKKGLRNVASVYVDGSFVASGS 263

Query: 262 SMQKEIARLNAAKEALIKLSDSMDTRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQS 321
           S QK+IA+LNAA+ AL KL  SM   +  F  I GI+GSFEI+GAKQKLH+ C +KKW  
Sbjct: 264 SEQKDIAKLNAARGALHKLLQSMPVDVNPF-GIGGINGSFEIDGAKQKLHELCGKKKWPK 323

Query: 322 PSYSKEV-LGRPHGRRFVCCVKISTFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKY 381
           P Y  E   GRPH R FV  VKI T +    I GDEKSRVKEAENSAAS MIR LQ+  Y
Sbjct: 324 PIYELEKDEGRPHERIFVSSVKIPTVDGALYITGDEKSRVKEAENSAASFMIRALQESGY 379

[Close]

BLAST of CSPI04G11370 vs. TrEMBL
Match: V4TYN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-113
Identity = 214/331 (64.65%), Postives = 257/331 (77.64%), Query Frame = 1


Query: 52  IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 111
           +E I++Y FKNK+LLEEALTHSSY +S SY RLEFIGD+A+GLA+S Y F  YP L+ GQ
Sbjct: 39  VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQ 98

Query: 112 LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGLVKA 171
           L+LLRAAN+STEKLARVAV H  Y +VR +A  LDD VREFA+AV+ EDN+  YGG +KA
Sbjct: 99  LSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVREFAEAVSQEDNTAVYGGSIKA 158

Query: 172 PKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRN 231
           PKVLADIVES+A AIYVD++FDLQKLW I RGLLEPI TLEELQ +PQPVT+LF++CQ+N
Sbjct: 159 PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKN 218

Query: 232 GKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDTRIKTF 291
           GKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAA+EAL KL+ SM       
Sbjct: 219 GKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVC 278

Query: 292 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGRPHGRRFVCCVKISTFNDTH 351
              D ID  FEIE AKQKLH+ C +KKW  PSY  E   G  H ++F+  V+I+T +   
Sbjct: 279 EIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQIATTDGVL 338

Query: 352 SIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
            I GDEKSRVK+AENSAAS+M+R L++  YL
Sbjct: 339 FITGDEKSRVKDAENSAASMMLRALRESTYL 369

[Close]

BLAST of CSPI04G11370 vs. TrEMBL
Match: A0A067F3Y1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.9e-113
Identity = 213/331 (64.35%), Postives = 257/331 (77.64%), Query Frame = 1


Query: 52  IERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQ 111
           +E I++Y FKNK+LLEEALTHSSY +S SY RLEFIGD+A+GLA+S Y F  YP L+ GQ
Sbjct: 39  VENIINYNFKNKRLLEEALTHSSYTDSTSYQRLEFIGDAALGLALSNYVFLAYPQLDPGQ 98

Query: 112 LTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGLVKA 171
           L+LLRAAN+STEKLARVAV H  Y +VR +A  LDD V+EFA+AV+ EDN+  YGG +KA
Sbjct: 99  LSLLRAANISTEKLARVAVKHGFYKFVRHSAAALDDKVKEFAEAVSQEDNTAVYGGSIKA 158

Query: 172 PKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVCQRN 231
           PKVLADIVES+A AIYVD++FDLQKLW I RGLLEPI TLEELQ +PQPVT+LF++CQ+N
Sbjct: 159 PKVLADIVESIAAAIYVDIDFDLQKLWMIFRGLLEPIVTLEELQQQPQPVTLLFKLCQKN 218

Query: 232 GKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDTRIKTF 291
           GKQVDIKHW+    +IASVYVDG FVAS SS QKEIA+LNAA+EAL KL+ SM       
Sbjct: 219 GKQVDIKHWRKNRKNIASVYVDGSFVASASSEQKEIAKLNAAREALEKLAQSMPVNCDVC 278

Query: 292 VTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGRPHGRRFVCCVKISTFNDTH 351
              D ID  FEIE AKQKLH+ C +KKW  PSY  E   G  H ++F+  V+I+T +   
Sbjct: 279 EIFDDIDEKFEIEAAKQKLHELCGKKKWPKPSYKIEKDEGPSHDKKFMSAVQIATTDGVL 338

Query: 352 SIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
            I GDEKSRVK+AENSAAS+M+R L++  YL
Sbjct: 339 FITGDEKSRVKDAENSAASMMLRALRESTYL 369

[Close]

BLAST of CSPI04G11370 vs. TAIR10
Match: AT3G20420.1 (AT3G20420.1 RNAse THREE-like protein 2)

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97
Identity = 188/337 (55.79%), Postives = 249/337 (73.89%), Query Frame = 1


Query: 48  SMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDL 107
           SM  +E+IL+YKF NK LL+EA+TH+S  + PSY+RLEFIGDSAIGLAIS Y +  YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 108 NQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDN-SIPYG 167
               L+LLRAANVSTEKLARV++ H LYS++RRNA  LD+ V+EF++AV  ED+ S+ YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 168 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQ 227
           GLVKAPKVLAD+ ES+AGA+YVDV FDLQ+LW I RGLLEPI TL++LQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 228 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDT 287
           +C ++ K++DIK+WK+G+ SIA +Y+D + +ASG +  K+IARL AAKEAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 288 RIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGRPHGRRFVCCVKIS- 347
                + ID      ++  AK KL++ C +KKW  P YS +E      G+RFVC  KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 348 TFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           T   T  + GDE+S++K+AE+S+A  MIR L+K  YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of CSPI04G11370 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 189.9 bits (481), Expect = 2.9e-48
Identity = 127/347 (36.60%), Postives = 187/347 (53.89%), Query Frame = 1


Query: 52   IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 111
            +ER L Y+FK K LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y  L  
Sbjct: 1563 LERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1622

Query: 112  GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG--- 171
            G+LT LRAA V+ E  ARVAV H+L+ Y+R  +  L+  +REF   V  E +   +    
Sbjct: 1623 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1682

Query: 172  -GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLF 231
             G  KAPKVL DIVES+AGAI++D   D    W + + LL+P+ T E L +   PV  L 
Sbjct: 1683 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRELQ 1742

Query: 232  QVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMD 291
            + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AA+ AL  L +   
Sbjct: 1743 ERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEI 1802

Query: 292  TRIKTFVTIDGIDGSFEIEG------------AKQKLHDFCCRKKWQSPSYSKEVLGRP- 351
               K     +G  G  + E              +Q L+D C RK W  PSY     G P 
Sbjct: 1803 AESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPA 1862

Query: 352  HGRRFVCCVKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 378
            H +RF   V+++T +   T   IG+    VK+A++SAA L++  L K
Sbjct: 1863 HAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]

BLAST of CSPI04G11370 vs. TAIR10
Match: AT5G45150.1 (AT5G45150.1 RNAse THREE-like protein 3)

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-44
Identity = 105/270 (38.89%), Postives = 170/270 (62.96%), Query Frame = 1


Query: 47  NSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPD 106
           +S+  +E+IL+Y F NK LL+E LTH+   NSP +  L F+G+SA+ LA + + +  YP 
Sbjct: 413 SSVEAVEKILNYSFVNKTLLKELLTHN---NSPLFQGLMFVGESALSLAFTKHLYLTYPM 472

Query: 107 LNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG 166
           L    L++LR AN   +K A VAV   +Y     +    +    +F + +  ED+  PY 
Sbjct: 473 LEPKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIELMGKEDD--PY- 532

Query: 167 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVE-PQPVTVLF 226
            +VKAPK+L +++  VAGA+Y+DV++++Q+L  I R LLEPIYTL++L+++  QP  +LF
Sbjct: 533 RVVKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLMLF 592

Query: 227 QVCQRNGKQVDIKHWKNGSN--SIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDS 286
           ++  ++GKQ+D ++ K+G +  +IA VY+D  F+ASG + + + A+L AA+EA+ KLS+ 
Sbjct: 593 RLADKHGKQIDFRYSKDGGSRKNIAQVYMDDMFIASGCAKRIDTAKLLAAEEAIQKLSEC 652

Query: 287 MDTRIKTFVTIDGIDGSFEIEGAKQKLHDF 314
           M   I+  +  D +DG     G+   L  F
Sbjct: 653 MP--IEKIIHQDNLDGEVIQTGSSSLLTAF 674

[Close]

BLAST of CSPI04G11370 vs. TAIR10
Match: AT4G15417.1 (AT4G15417.1 RNAse II-like 1)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-39
Identity = 102/230 (44.35%), Postives = 143/230 (62.17%), Query Frame = 1


Query: 52  IERILSYKFKNKKLLEEALTHSSYLN--SPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 111
           +E+IL+YKFK+K LL +A T +SY++  S SY+ LE +GDS + + I   F  LYP    
Sbjct: 32  LEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPKEAP 91

Query: 112 GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGLV 171
           G LT LRA NV TEKLARVAV H+LYSY+R     L++ + EF +  A+E   +   GL+
Sbjct: 92  GPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVE--AMEKYPLHSNGLL 151

Query: 172 KAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVCQ 231
           K PKVLADIVES  GAI++D     + +W +I+ LLEPI  L+++  +  P+T L ++CQ
Sbjct: 152 KVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLDKM--KSHPMTELNEMCQ 211

Query: 232 -RNGKQVDIKHWKNGSNSIASVYVDGKFVASG-SSMQKEIARLNAAKEAL 278
            RN K      W+   N     +++ KFV  G   ++KE AR  AAK A+
Sbjct: 212 KRNLKLTSKDTWE--ENQTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254

[Close]

BLAST of CSPI04G11370 vs. TAIR10
Match: AT3G43920.2 (AT3G43920.2 dicer-like 3)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29
Identity = 76/237 (32.07%), Postives = 130/237 (54.85%), Query Frame = 1


Query: 47   NSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPD 106
            + +  +ER + ++F  K LL+EA+THSS   S SY+RLEF+GDS +   I+ + F  Y  
Sbjct: 1196 DELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLFNTYEQ 1255

Query: 107  LNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG 166
               G++T LR+A V+ E  A+VAV + L+++++R A  L+  + ++  +    D +    
Sbjct: 1256 TGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSI 1315

Query: 167  GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQ 226
              ++ PK L D+VES+AGA+ +D   DL ++W +   LL P+ T ++LQ+   P   L +
Sbjct: 1316 PSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQL--PPYRELNE 1375

Query: 227  VCQRNGKQVDIKHWKNGSNSIASVYV---DGKFVASGSSMQKEIARLNAAKEALIKL 281
            +C   G    +K   +G  + A++ +   D      GS    ++A   AA   L +L
Sbjct: 1376 LCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQL 1430

[Close]

BLAST of CSPI04G11370 vs. NCBI nr
Match: gi|659096533|ref|XP_008449148.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 539.3 bits (1388), Expect = 5.6e-150
Identity = 278/333 (83.48%), Postives = 303/333 (90.99%), Query Frame = 1


Query: 49  MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 108
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 109 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGL 168
           QG+LTLLRAANVSTEKLARVAVLH LY YVRR+A DLDDNVREFADAVALEDNSIPYGGL
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 169 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVC 228
            KAPKVLADIVESVAGAIYVDVEFDLQKLWAII+ LL+PIYT E+L+ EPQPVT+LF+VC
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 229 QRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDTRI 288
           Q+NGKQV IK+ + GS ++A VYVD   VASGSS QK IARLNAA++ALI LSDSMDT+I
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 289 KTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGRPHGRRFVCCVKISTFND 348
           KT VTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSYS+EVLGRPH RRFVC VKIST++D
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSEEVLGRPHERRFVCSVKISTYDD 300

Query: 349 THSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           THSIIGDEKSRVKEA+NSAASLMIR+LQ+RKYL
Sbjct: 301 THSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 333

[Close]

BLAST of CSPI04G11370 vs. NCBI nr
Match: gi|659096531|ref|XP_008449147.1| (PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 534.6 bits (1376), Expect = 1.4e-148
Identity = 278/334 (83.23%), Postives = 303/334 (90.72%), Query Frame = 1


Query: 49  MTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLN 108
           MT IER LSYKFKNKKLLE ALTHSSY N+ SYDRLEFIGDSAIGLAIS YFF LYPDL+
Sbjct: 1   MTAIERKLSYKFKNKKLLEVALTHSSYPNTASYDRLEFIGDSAIGLAISNYFFSLYPDLD 60

Query: 109 QGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYGGL 168
           QG+LTLLRAANVSTEKLARVAVLH LY YVRR+A DLDDNVREFADAVALEDNSIPYGGL
Sbjct: 61  QGRLTLLRAANVSTEKLARVAVLHGLYDYVRRSAADLDDNVREFADAVALEDNSIPYGGL 120

Query: 169 VKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQVC 228
            KAPKVLADIVESVAGAIYVDVEFDLQKLWAII+ LL+PIYT E+L+ EPQPVT+LF+VC
Sbjct: 121 KKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDLLKPIYTPEDLEAEPQPVTLLFEVC 180

Query: 229 QRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDTRI 288
           Q+NGKQV IK+ + GS ++A VYVD   VASGSS QK IARLNAA++ALI LSDSMDT+I
Sbjct: 181 QKNGKQVVIKNQEKGSWNVARVYVDRTLVASGSSKQKPIARLNAARQALIILSDSMDTKI 240

Query: 289 KTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGRPHGRRFVCCVKISTFN 348
           KT VTIDGIDGSFEIEGA QKLHDFC RKKWQ+PSYS +EVLGRPH RRFVC VKIST++
Sbjct: 241 KTVVTIDGIDGSFEIEGATQKLHDFCSRKKWQNPSYSVEEVLGRPHERRFVCSVKISTYD 300

Query: 349 DTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           DTHSIIGDEKSRVKEA+NSAASLMIR+LQ+RKYL
Sbjct: 301 DTHSIIGDEKSRVKEAKNSAASLMIRNLQERKYL 334

[Close]

BLAST of CSPI04G11370 vs. NCBI nr
Match: gi|659096529|ref|XP_008449146.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo])

HSP 1 Score: 523.9 bits (1348), Expect = 2.4e-145
Identity = 269/336 (80.06%), Postives = 298/336 (88.69%), Query Frame = 1


Query: 47  NSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPD 106
           +S+  +ERILSYKFKNKKLLEEALTH SY +S SY+RLEFIGDSAIGLA++ YFF  YP+
Sbjct: 3   SSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAYPN 62

Query: 107 LNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIPYG 166
           L+QGQL+LLRAANVSTEKLARVAV H LY+YVRRNA  +D  V+EF D+VALE +S+PYG
Sbjct: 63  LHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSSVPYG 122

Query: 167 GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVLFQ 226
           GL+KAPKVLADIVESVAGA+YVDV FDLQKLW IIRGLLEPIYTLEELQVEPQPVTVLF 
Sbjct: 123 GLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVLFD 182

Query: 227 VCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSMDT 286
           VCQRNGKQVDIK+WKNGS +IASVYVDG FVASGSSMQKEIARLNAA+EALIKLS SMDT
Sbjct: 183 VCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGSMDT 242

Query: 287 RIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYS-KEVLGRPHGRRFVCCVKIST 346
           +IKT VTI+GID SFEIEGAKQKLHDFCCRKKWQ P YS ++ LG  HGRRFVC VKI T
Sbjct: 243 KIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVKIPT 302

Query: 347 FNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
              T  I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 303 CYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11370 vs. NCBI nr
Match: gi|778697607|ref|XP_011654357.1| (PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 2.5e-142
Identity = 264/338 (78.11%), Postives = 295/338 (87.28%), Query Frame = 1


Query: 45  LRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLY 104
           + +S+  +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 105 PDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP 164
           P L+QG L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+P
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 165 YGGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVL 224
           YGG++KAPKVLADIVESVAGA+YVDV FDLQKLW IIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 225 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSM 284
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAA+EALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 285 DTRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGRPHGRRFVCCVKI 344
           DTRIKTFVTIDGID SFEIEGAKQKLHD C ++KWQ P+YS E  LG  H R FVC VKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 345 STFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           +T   T  I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of CSPI04G11370 vs. NCBI nr
Match: gi|700198793|gb|KGN53951.1| (hypothetical protein Csa_4G192230 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 2.5e-142
Identity = 264/338 (78.11%), Postives = 295/338 (87.28%), Query Frame = 1


Query: 45  LRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLY 104
           + +S+  +ERILSY F NK LLEEALTH SY  S SY+RLEF+GDSAIGLA++ YFF   
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 105 PDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP 164
           P L+QG L+LLRAANVSTEKLARVAV H LY+YVRR++  +DD V+EF D+VALE +S+P
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSSVP 120

Query: 165 YGGLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVL 224
           YGG++KAPKVLADIVESVAGA+YVDV FDLQKLW IIRGLLEPIYTLEELQVEPQPVTVL
Sbjct: 121 YGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 225 FQVCQRNGKQVDIKHWKNGSNSIASVYVDGKFVASGSSMQKEIARLNAAKEALIKLSDSM 284
           FQVCQRNGKQVDIKHWKNGSNSIASV+VDGKFVASGSSMQKEIARLNAA+EALIKLSDSM
Sbjct: 181 FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 285 DTRIKTFVTIDGIDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEV-LGRPHGRRFVCCVKI 344
           DTRIKTFVTIDGID SFEIEGAKQKLHD C ++KWQ P+YS E  LG  H R FVC VKI
Sbjct: 241 DTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVKI 300

Query: 345 STFNDTHSIIGDEKSRVKEAENSAASLMIRDLQKRKYL 382
           +T   T  I+GDEKSRVK+AENSAASLMIR LQ+RK+L
Sbjct: 301 ATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

The following BLAST results are available for this feature:

BLAST of CSPI04G11370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RTL2_ARATH	3.5e-96	55.79	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana GN=RTL2 PE=1 SV=1	[more]
RTL2_ORYSJ	8.0e-64	48.39	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0271300 PE...	[more]
DCL1_ARATH	5.2e-47	36.60	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1 SV=2	[more]
DCL1_ORYSJ	7.5e-46	36.90	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica GN=DCL1 PE=3 SV...	[more]
RTL3_ARATH	7.7e-43	38.89	Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana GN=RTL3 PE=2 SV=1	[more]

BLAST of CSPI04G11370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1E2_CUCSA	1.7e-142	78.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192230 PE=4 SV=1	[more]
A0A0A0L020_CUCSA	1.4e-128	86.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192730 PE=4 SV=1	[more]
A0A061F5X1_THECC	1.2e-114	61.77	Ribonuclease 3-like protein 2 OS=Theobroma cacao GN=TCM_030826 PE=4 SV=1	[more]
V4TYN2_9ROSI	1.3e-113	64.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008694mg PE=4 SV=1	[more]
A0A067F3Y1_CITSI	2.9e-113	64.35	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017515mg PE=4 SV=1	[more]

BLAST of CSPI04G11370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20420.1	2.0e-97	55.79	RNAse THREE-like protein 2	[more]
AT1G01040.2	2.9e-48	36.60	dicer-like 1	[more]
AT5G45150.1	4.4e-44	38.89	RNAse THREE-like protein 3	[more]
AT4G15417.1	2.5e-39	44.35	RNAse II-like 1	[more]
AT3G43920.2	3.0e-29	32.07	dicer-like 3	[more]

BLAST of CSPI04G11370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096533\|ref\|XP_008449148.1\|	5.6e-150	83.48	PREDICTED: ribonuclease 3-like protein 2 isoform X2 [Cucumis melo]	[more]
gi\|659096531\|ref\|XP_008449147.1\|	1.4e-148	83.23	PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Cucumis melo]	[more]
gi\|659096529\|ref\|XP_008449146.1\|	2.4e-145	80.06	PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo]	[more]
gi\|778697607\|ref\|XP_011654357.1\|	2.5e-142	78.11	PREDICTED: ribonuclease 3-like protein 2 [Cucumis sativus]	[more]
gi\|700198793\|gb\|KGN53951.1\|	2.5e-142	78.11	hypothetical protein Csa_4G192230 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000999	RNase_III_dom
IPR014720	dsRBD_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004525	ribonuclease III activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G11370.1	CSPI04G11370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	GENE3D	G3DSA:1.10.1520.10		coord: 48..210 score: 2.6
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 82..189 score: 1.2
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 64..214 score: 3.5
IPR000999	Ribonuclease III domain	PROFILE	PS50142	RNASE_3_2	coord: 49..191 score: 35
IPR000999	Ribonuclease III domain	unknown	SSF69065	RNase III domain-like	coord: 171..211 score: 2.79E-38coord: 48..139 score: 2.79
IPR014720	Double-stranded RNA-binding domain	GENE3D	G3DSA:3.30.160.20		coord: 306..376 score: 3.7E-9coord: 220..280 score: 1.
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 306..375 score: 7.0E-11coord: 220..280 score: 4.
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 306..376 score: 2.1E-6coord: 220..281 score: 0
IPR014720	Double-stranded RNA-binding domain	PROFILE	PS50137	DS_RBD	coord: 219..282 score: 9
None	No IPR available	PANTHER	PTHR14950	HELICASE-RELATED	coord: 47..301 score: 2.6E
None	No IPR available	PANTHER	PTHR14950:SF22	SUBFAMILY NOT NAMED	coord: 47..301 score: 2.6E
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 173..280 score: 1.65E-8coord: 306..378 score: 2.36

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G11370	Wax gourd	cpiwgoB408
CSPI04G11370	Cucumber (Gy14) v1	cgycpiB513
CSPI04G11370	Cucurbita maxima (Rimu)	cmacpiB672
CSPI04G11370	Cucurbita maxima (Rimu)	cmacpiB877
CSPI04G11370	Cucurbita moschata (Rifu)	cmocpiB663
CSPI04G11370	Cucurbita moschata (Rifu)	cmocpiB857
CSPI04G11370	Cucumber (Chinese Long) v2	cpicuB183
CSPI04G11370	Melon (DHL92) v3.5.1	cpimeB323
CSPI04G11370	Watermelon (Charleston Gray)	cpiwcgB317
CSPI04G11370	Watermelon (97103) v1	cpiwmB346
CSPI04G11370	Cucurbita pepo (Zucchini)	cpecpiB076
CSPI04G11370	Cucurbita pepo (Zucchini)	cpecpiB498
CSPI04G11370	Bottle gourd (USVL1VR-Ls)	cpilsiB257
CSPI04G11370	Melon (DHL92) v3.6.1	cpimedB314
CSPI04G11370	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G11370	Silver-seed gourd	carcpiB0314
CSPI04G11370	Silver-seed gourd	carcpiB0661
CSPI04G11370	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G11370	Watermelon (97103) v2	cpiwmbB309