CSPI04G11340 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCATTATTCAAATCATCCACACAGTGAAATATTTCCTTATAAAATCGGGAGTTAGGTGGATGGCTCATCATCCATGAATATGATGAATTCTCAACAATACCTGTGATTCTCATCGTTCCCCATTTTTTTCTCACAATTTTCTCTTCTTATTCAACTTCCATTGATTTCGATTCCGATTCCTTTCTTCTTAATCGAACTAACCCAGATTCTGTACTTCACTGTTGACCTATTCCCCGCTCATTTCCCTTCTGCCGGCCAATTGCTTCTCCTAACCATGATTGATTCTATCAAGGCTGCGATCGGTGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGTTAGCCTTTTTTTTGTTTTTGGGCTTTGGTTTTTTGACCTCTCTCTGCTTAACTGACTGTGAAATTTTGTGGGTTGTTTCGATTGGTTTAAATTTTGACCTGTATTGCCTATAATCTGTGGGTAGGATACTTGATGTAATGTGGGTTTTGTTTGTGTGTTGGGTGTCTTCAGTTTTCTTTTCATGTTGCCTCTTGAGAGGTGGATTGGTTTTCCATGTTCGGGTTTGGATTGAGAAAGCTGAGTTGAGTGTTGTCTTTTGAGTAATGATTGAGGTAGAAAGATTGTTGTATGACTAAAACGGAGTTGATGGTGTATGATGATTAAGAAAGAAGGAAAAAGGAGAATTTTTTTTATGGATATTGAACTAGGGCTAAGGTAAATAATTTTGTATGCTTAATAAAATGCGTTGCTTTTTTGCTCTGGGGGAGGAAGCCTTCCAAACTTTCAATATATATGAATTTTCAATTAAAGAAATTCAGGCCAAATGAGAGGAACTACTTGTTGACCGATCCATTATGCCTACATGGAATTTAATATTCTAAAAATTTCTTTCACACTCAAATGTTGTGGGGTTGTACCGTGGGGTCTTAAGGTGGTCTAAACACTCACTGTCGCAGATATTAAAAAAATTACTGACTGTTATTATCCTTTTTTTTTTCTAAGTTCTATCAAGGATTTAGGAAATCAATGTAATGAAATATTGTTGGTTGAGGACTTCTGCATATCCATTTTCCTTCAGCTCGAATTAAATGTTTTCTTTTTTAAGAATGGTATTATATGCTGAATTCATTGTTGGTAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGTGAGTTCACCTCTTCTAGTAATCTTTTATACTCTACTTGTTCTGATTGATTATTATTATTGATAACTTGTTCTGGTTTAAATCCTTCGTGGATGTATTTTGTGTGCTATTGATGCGACAGCCTATTTGTAGTTGCTTGCTTTGCTTAGACTACTAACTACTATTAACATTTGAAGATCTTCATGTTTTTCTGTTTTATATAAACACTTGCTCTATTGTTGCTTTGCATTTTTTTTTTGGCACTGAAATTGCATAACTCTGGTGTGTTTGTGTTCCAAAAGACCAAAATACATTTTTGAACAAACATCATTTAGGGCAAAAAGTTAAAATGTAATATAGCAAGTTATTATAGTTTAGCAAGTGGTTTGCTAAAGCATTAATTGTGATTAGTATGCTTTACATCTACTCCTATGTTTGCTTGCCATTTTTATTTCGAAACATGAGAATGGATCAATTAACAATATTTTGTGGGTGCGTTGAGCTTATATTGCTCCTTACTTCCATGATCTATCTCTATTTTATCTCATGCATAATTGCAGGAACACTTTTTACTAATTTGAATCATGTTAGTTACTTTTGTGACTTATTTTACGTGGTTAAAAGTGTTCTAATTTGAATTAATTGTTAATTTTTGCTAAATTAAGAACTTTTCCTTTTCCTTAGGTTTATCTTGAAAAACCATAATTTTCCATATCAATTCCAAGCATCTTCACCAATGCTTAACTGTATTTTCCCACAACATTTCAACTTTCCTCTGTTTATTCATATGTCTTCTGCCGAGCTGGCAAATTCTAGGATAATGTAAAACTCTGAAGGATAGCATTATAACATATTGAACTAATGGGGCAAAAGGAAAAAAAGTAGGACAGTCTTGATCTTCCCATCTTTTTATCTAAGCCAACGCCAGTTTGGATTTGAAAGTATGTTTGGCTACCTAGTTTGCAATATATCTGCCAGGTTTACAACTCACTTAGACTTCACACAAAACAGAGTATACCTTTTTGGTTATCTTTTCACCCAAGATTAGTAACTGAACTTTATTTGTTACGAGAATCTCATAGCTGACGAAGATTTAAATTAGGAAAGAACTGAATAATTCCAGATGAACAAATGTTCCTTCTGTTCTTTCCATTGAATTTTGATGGAGTGACATGCCTCACCGCCACACGCCCATCATGGCTGTAACTTTGAAACCTAAACATCATGAAGTGTTTTTTGCCTAATTGGTTTTTAGCTACAATACTTAGCTCTAATCTGTAGACACAGAATTCTCTCAATCATATTTGTGGATAAATACTTCCACTAGTTTTTCTCTAGACACGTACTTTCTCTAACCTTATCTCCATCCACACATGCTTTTCTCCTCCATCTCTTTGAAACATGTACTACTTTTGTTAGTCCTATACGCCTACTCTACTGATCACTTTGTAGTCTTTACATACACGATCTCCTTAGTGTATGTCTTTTTTCTAACCATTCTGTCTTCGCAAGAGCTAACTTTTCCAAACAAAGATACTCCCAACAATTTCTCTGCATTCACTTGCTTTATAATTAACAAAATTCCCTTTTTAATAAATTATAAATTCTAAACGGCTTTTTGAAGTAGAAAAAAACATTAAAATCTTTTTGGAATAAAAAACCCTATTACATAAAATTTATTAAAAAGGATGAAAGCATAGTGAAGATGATATCAACTCATCCCGAGGACCAAATCACCTTGATCAAATATTTAATATCTACGCAAATATTGTAGAGAGAGACTCTTGTCTTACAAGATTAGTAGAGGTTGATGGTTTGAACTATACAATATGAATTAGCTTTGTCTCATTTGCAACAACTTCTGTTGCATGCATGCATATTCGACTGACCCGTTTGTCTCCTTTGGTTCATCCCTTGGATATATAATGTTTGGTTGGTTCATGAACTGGGAAAAGCTGTGTTATGATTTTATGAACCCAAACCATATAAATGAAGGAGAAAACGATAGTTGTTATTTTCAATTCGACAAGAAAGCTGATCTTTTTTTTTTTTTTTGTTTTGAAATGCAGGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCGAAGCAGAAGAAAGCTTAAAACCGATAGTTAAAATGGTGGTGCCACCGTGTTTCTTTAGATAAGCTTTGATCAATAAAATGTAGCAAAGTAAGAGCTTCTAGTTGTGTTATTAAGGTAATTGTAAGTGTTTTGAAGTTTATATTTTGAAGCTGCATCTGGATCAATAATCCTTCAATTAGATTCACCTTTAAATTAAAATTTCTTTAGGCAGTTATTGGTTGATTCTTATAATTATTTTCTTCAGGCTTGTTTGGATTATAACTTTTTCAAGTGCTTAAAAACCTTTGGACATTAGGTTTCTGCTAATAGCAACTATTTTTCTTTTGGT ATGATTGATTCTATCAAGGCTGCGATCGGTGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCGAAGCAGAAGAAAGCTTAA ATGATTGATTCTATCAAGGCTGCGATCGGTGATGCCGTTCTCACTTCCATGTGGATTTTCTGTGCTTCATCTCTTGGGGTTCTCACTTCCGTTCTCTACTCAGCCGCCGGTGTTTATGGAATCCCACTTCACCCACTTCTTATCACTACTACTCTTGTTTTCATTCTTGTTTTTGTTTTTAATATAATTGGTGCTCTTTTGGGTGGAGCTAGCTTTAATCCTACTGCCACTGCTGCTTTTTATGCTGCTGGTGTTGGTCCAACCTCTCTCTTCGCCATGGCTATCCGTTTCCCTGCTCAGGCGGCTGGTGCGGTTGCTGGTGCCCTGGCAATCAAGGAGGTGATGCCTATACAATACAAGCACATGCTTGGTGGACCTTCTTTGAAAGTTGACATTCATTCTGGAGCTACAGCTGAAGGAGTTTTGACCTTTATAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGGGGTCCCTCCAGCCCTGTTATCAAAACATGGTTGCTGGCAATGGCTACCGTAGCGTTAATCGTTGCTGGTTCTAGTTACACAGGACCTTCCATGAATCCTGCAAATGCATTTGGATGGGCATATATAAACAACAGGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCTCCCCCTTTGTAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATGATCTTCCCACCACCACCCCCAGCCCCGGCGAAGCAGAAGAAAGCTTAA
BLAST of CSPI04G11340 vs. Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 6.6e-80 Identity = 150/243 (61.73%), Postives = 196/243 (80.66%), Query Frame = 1
BLAST of CSPI04G11340 vs. Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2) HSP 1 Score: 296.6 bits (758), Expect = 2.5e-79 Identity = 146/245 (59.59%), Postives = 196/245 (80.00%), Query Frame = 1
BLAST of CSPI04G11340 vs. Swiss-Prot
Match: SIP11_MAIZE (Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 4.9e-75 Identity = 144/241 (59.75%), Postives = 190/241 (78.84%), Query Frame = 1
BLAST of CSPI04G11340 vs. Swiss-Prot
Match: SIP11_ARATH (Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 1.1e-69 Identity = 137/243 (56.38%), Postives = 182/243 (74.90%), Query Frame = 1
BLAST of CSPI04G11340 vs. Swiss-Prot
Match: SIP12_ARATH (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.5e-65 Identity = 129/243 (53.09%), Postives = 177/243 (72.84%), Query Frame = 1
BLAST of CSPI04G11340 vs. TrEMBL
Match: A0A0A0KYP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192210 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 5.9e-128 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of CSPI04G11340 vs. TrEMBL
Match: Q107W9_VITVI (Small basic intrinsic protein 1 OS=Vitis vinifera GN=VIT_08s0007g07680 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.2e-93 Identity = 177/239 (74.06%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of CSPI04G11340 vs. TrEMBL
Match: M1TFX6_CAMSI (Aquaporin protein AQU20 OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.6e-93 Identity = 180/239 (75.31%), Postives = 207/239 (86.61%), Query Frame = 1
BLAST of CSPI04G11340 vs. TrEMBL
Match: A0A059DHD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02066 PE=3 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91 Identity = 177/244 (72.54%), Postives = 207/244 (84.84%), Query Frame = 1
BLAST of CSPI04G11340 vs. TrEMBL
Match: I1N854_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G108400 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 4.2e-89 Identity = 166/248 (66.94%), Postives = 203/248 (81.85%), Query Frame = 1
BLAST of CSPI04G11340 vs. TAIR10
Match: AT3G04090.1 (AT3G04090.1 small and basic intrinsic protein 1A) HSP 1 Score: 264.6 bits (675), Expect = 6.0e-71 Identity = 137/243 (56.38%), Postives = 182/243 (74.90%), Query Frame = 1
BLAST of CSPI04G11340 vs. TAIR10
Match: AT5G18290.1 (AT5G18290.1 Aquaporin-like superfamily protein) HSP 1 Score: 249.6 bits (636), Expect = 2.0e-66 Identity = 129/243 (53.09%), Postives = 177/243 (72.84%), Query Frame = 1
BLAST of CSPI04G11340 vs. TAIR10
Match: AT3G56950.2 (AT3G56950.2 small and basic intrinsic protein 2;1) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-25 Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 1
BLAST of CSPI04G11340 vs. TAIR10
Match: AT2G16850.1 (AT2G16850.1 plasma membrane intrinsic protein 2;8) HSP 1 Score: 69.3 bits (168), Expect = 3.7e-12 Identity = 53/176 (30.11%), Postives = 78/176 (44.32%), Query Frame = 1
BLAST of CSPI04G11340 vs. TAIR10
Match: AT2G37180.1 (AT2G37180.1 Aquaporin-like superfamily protein) HSP 1 Score: 65.1 bits (157), Expect = 6.9e-11 Identity = 51/186 (27.42%), Postives = 84/186 (45.16%), Query Frame = 1
BLAST of CSPI04G11340 vs. NCBI nr
Match: gi|449459590|ref|XP_004147529.1| (PREDICTED: aquaporin SIP1-2 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 8.5e-128 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of CSPI04G11340 vs. NCBI nr
Match: gi|659082671|ref|XP_008441970.1| (PREDICTED: aquaporin SIP1-1-like [Cucumis melo]) HSP 1 Score: 459.9 bits (1182), Expect = 2.7e-126 Identity = 239/243 (98.35%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of CSPI04G11340 vs. NCBI nr
Match: gi|1009170919|ref|XP_015866459.1| (PREDICTED: aquaporin SIP1-1-like [Ziziphus jujuba]) HSP 1 Score: 354.4 bits (908), Expect = 1.6e-94 Identity = 177/240 (73.75%), Postives = 207/240 (86.25%), Query Frame = 1
BLAST of CSPI04G11340 vs. NCBI nr
Match: gi|526117862|ref|NP_001267877.1| (small basic intrinsic protein 1 [Vitis vinifera]) HSP 1 Score: 350.9 bits (899), Expect = 1.8e-93 Identity = 177/239 (74.06%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of CSPI04G11340 vs. NCBI nr
Match: gi|459021864|gb|AGG39698.1| (aquaporin protein AQU20 [Camellia sinensis]) HSP 1 Score: 349.4 bits (895), Expect = 5.2e-93 Identity = 180/239 (75.31%), Postives = 207/239 (86.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |