CSPI04G10220 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G10220
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrotransposable element Tf2
LocationChr4 : 8251612 .. 8255533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCGTAGGCTAAACTTTGGTATAACACCACCTTCCATGCTACCACAAAATCCACTCCTTTCCAACTTGTCTTTGGTAGACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCGTACATAATGTGTTTCACGTTTCTCAATTGAAAACGAAAGTTAGGGCAACAACAGCAAGCTCAACCAATAGCCCTAAACTGACCGAAGAGTTCGAATTGTAACTCAACCCTGAAACAGTGCTGGAATTTGTTGGAGTAAGGAGCTTGGTGCCAATGAGTGGCTGATCAAATGAAAGAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGTAAGGCCTCCTATTATCCATCAGTATAAAAGAAAGGGCAGGAAAGTAAATACACAGGAGGGGACAGAGCTGGGAGAGAGAAATAAAGAAAAGAATGATGTCTTTTAGGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGGTGTGTATTTCTTACTGTTTCTTTACTTTGCTTTGGATCTCTTGTTGAACTTTCTGTTTATTGGAATATAGGTCTATCATAGAGTGCTGCCTCTGTTTCTATCATTTTGTTGGGATTGTTATTGTCTTTTGAGGAAAGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGTGGCCCAAGCTTAACCTCAAACATCCCCATATCGTAGTCCATAATAGGTTAGTTGGATACAAAAGGGAAACGAACCTAATCACTTAAATTTGTACCATTCCCCTCTCTATAGGTAATACACATATAAGGACCAAGTGATGTGCGATGTTTTAGAAATGGATGTGTGCCATATCCTTCTAGGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTGTGAATTTTATCGGATGGAAAAAAGGATTGTGTTAGTTCTGATTGGCAACAATGAGATCCCAAAAACTACAACTACTTCCAAGAATAAGAATCTCTTTACTGTATGCCCTGGTAGTGAACTAACCTTCTTAAAAAAGGCTTTCGTGGTAAAAAAACTCAACCCTCAAAGTGAAAAACACAACACTTAGTCCATTAATAACCAATCTCTTTGAGAGAATTCCCACTTCTAACACAAAACCCATCCTCTTTACCTCCTTTACCTATTATTCAGCACCAAATTGATCTCAGATCAGGGAGTTCTTTACCCAATCTTCCACACTACCGAATGAGCCCATTCCTAGGCCTAATGACCAGTGTTTTAAAAGCCCACTAAGGCGCACGCCTAGGCTCAAGGACCCACTTGGAGCTTATTTGTGAAGAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAGTCGCATTAGGCATGGGCTTTTTTTATAACTAATGGGCTGGGCTTTAATTATAAAAAAAATATTATTACGTAGGTTTTTTAAACCTATTACGTGAAATTGAAGAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGGTCCACAGGCCACCCTTCTTCTTCACACAAAACGTCAAGATTTCTTCTTCTTCAACAAATCAATTTGGTGCTGCCATTACTCTGTTTTTTGGTGCAAAAACAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGGTTTCTTCTTCTTCAACAAATACCTTGACATTTTTTTTTTCTTTTTAACACAAATAGCATAAATACCTTTTGTTTTTTTTTCTTTTTAACACAGCTGCTGTTTTTTCTTTTAAAAAAAAACTAAAACAGCAGATTTAGATAGCTTCTGTCTTTTTTTTCTTTTTAACACAGATGCTGTTTTTCTCTAAAAAAAACTACAACAGCAGATTTAAATAGCTGCTGTTTTTTCTTATAAAATATTGATTTTTTTTTTTTTTGTTAATTTTAAAAAATAATTTGTGAATAATTATTTTGATAACTTAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA

mRNA sequence

ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA

Coding sequence (CDS)

ATGAGTGGAGAACTTTATTGGGATAGGATGAAAAAAGATATTAAGAATTATGTGGAGCAATGCAACATATGTCAAAGAAACAAAACGGAATCAACCTTACCAGCAGGGTTACTTCAACCTATTCCTATACCAGAACTCATGCTTGAAGATTGGTCCATGGATTTTGTGGAAGGACTACCAACAGATGGAAATGTGAATGCAATAATGGTTGTGGTGGATAGGCTAAGCAAATGTGCCTACTTTGTGACATTGAGACACCCCTTCTCGGCGAAACAAGTTGCTGAAGTCTTTATTGATAAAGTGATAAGGAAACATGGGGTACCAAAAATCCATCATGACCGAGACAAAAAATTTCTAAGTAACTTCTGGAAGGAACTTTTTTCCCCTAAGGGCACCTCCTTGAAGAGAAGCACAGCTTTCCATCCCCAAACAGATGGACAAACTGAGAGAGTTAACCGTTGCCTTGAGACTTACCTAGCGTGTTACTACAATGAACAACCCACAAAATGGCACATGTTTATTCCACCTCCACCTCCACTGATTTCATATGGAGAAAGGAAATCACGGAATAATGAAGTTGAACAAATGCTCAAAGAAACGGATTTATCTCTGAATGCTCTAAAAGAAAATATGAACATGGCTCAAAATAGAATGAAGAAATTTGTTGATCTAAAAAGAAGAGAGGTGCAGTTTGAGGTGGGAGATGCTGTCTATCTGAAATTGAAACCCTATAGGCAACGCTCTCTTGCAATAAAGAGAAGTGAAAAGTTGGCACCGAAGTTCTATGGGCCGTATGAAATAATTGAAAAGATTGATGAAGTGGCATATCGTTTGAAGCTCCCTCTCGAAGCTGCCAATCTACCAGAAACTGAAGCTACTTGGGAATCAGTTTATCTAATGAAACAGCAGTTCCCCAACTTCCACCTTGAGGACAAGGTGAATCTTGAAGCCAGGGGTGTTGGAGGAGTCGTCAGCCACATAAAGGGCTGGGCTATTTTCTCTGTCTTTCTTTCTGAACTGAACCTAACAGAAGGAAATTCTTCAAAGAAAGTTGCTAACCCTTACTCTCGTCCTTCTTTAGGCAAATGCTTTCGCTGTGGCCAACAAGGGCACCTCTCCAACAAACGCCCTCAAAGAAAAATGCTAGCCATAAGTGATGACAACGAAGATGTTCAAGAAGAGCTGTTGGACAAGGAAGAAGATGCTGTTGTTTTATACACGGATGAAGATGAAAATTTATCTTGTGTTTTACAAAAGATTTTACTAAATCCCAAAACAAAGTATCATCCCCAAAGACATATCCTTTTCAGAAGTAGTTGTACTGTCAATCGGAAAATTTGTCAAGTGATCACCAATAGAGGGAGTAGTGAAAACATAGTCACCAAAAAGCTTGCCGCCCATGGCAATATGATAATCAAACCACCCATAACGGACAGAAGAGAATGCCTAAGCGAAGCGATTTCTGAAAAGCCCGGCTTAGGCGTGTGCCTCCCTTCAGGGGCGTCTAGGCTCAAAAACAACCCTTCACCCTTCTCCTCCCACAAATTTTCTTTAACGAACGACTCTTCATCTATTTCCGTTCCTTTTCGCTTCTGCTTCAAAGAAACTCTATCGCCGGCGCTGACCTTCAACAAATCTCTTCGGCAATGTAAGAGGAAAAGAGAAGATAAGGACGCTTCCCAAAATCACCGGCCACCCTTCTTCTTCTTCACACAAAACGGAAAGATCATAGATGCTGATGAAAGTTCGAGAAAAGATCCGGCATGGAAATATGGTCAATTGCATAATGACCAAGATATAAATATGTTTTTCTGTGGATTTCGTTCAAAAGTAACAAAAGGAGGGGTATATAGAATGAAACAACACCTCGTTGGTGATTATAGAAATGTCACCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCGAACCCAGAAACTGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGATCCTGGATTGA
Homology
[Close]
BLAST of CSPI04G10220 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-39
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1 

Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HMFIPPPP--------PLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFV 246
            H      P        P +S  E  S +++ ++  +ET      +KE++N    +MKK+ 
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYF 1182

Query: 247  DLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLP 282
            D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y L LP
Sbjct: 1183 DMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]
BLAST of CSPI04G10220 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-39
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1 

Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HMFIPPPP--------PLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFV 246
            H      P        P +S  E  S +++ ++  +ET      +KE++N    +MKK+ 
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYF 1182

Query: 247  DLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLP 282
            D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y L LP
Sbjct: 1183 DMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]
BLAST of CSPI04G10220 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-39
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1 

Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HMFIPPPP--------PLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFV 246
            H      P        P +S  E  S +++ ++  +ET      +KE++N    +MKK+ 
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYF 1182

Query: 247  DLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLP 282
            D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y L LP
Sbjct: 1183 DMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]
BLAST of CSPI04G10220 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-39
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1 

Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HMFIPPPP--------PLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFV 246
            H      P        P +S  E  S +++ ++  +ET      +KE++N    +MKK+ 
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYF 1182

Query: 247  DLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLP 282
            D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y L LP
Sbjct: 1183 DMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]
BLAST of CSPI04G10220 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 6.2e-39
Identity = 105/300 (35.00%), Postives = 150/300 (50.00%), Query Frame = 1 

Query: 7    WDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNVN 66
            W  ++K I+ YV+ C+ CQ NK+ +  P G LQPIP  E   E  SMDF+  LP     N
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 67   AIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWKE 126
            A+ VVVDR SK A  V      +A+Q A +F  +VI   G PK I  D D  F S  WK+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKD 1062

Query: 127  LFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKW--------------- 186
                    +K S  + PQTDGQTER N+ +E  L C  +  P  W               
Sbjct: 1063 FAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAI 1122

Query: 187  HMFIPPPP--------PLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFV 246
            H      P        P +S  E  S +++ ++  +ET      +KE++N    +MKK+ 
Sbjct: 1123 HSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYF 1182

Query: 247  DLKRREV-QFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLP 282
            D+K +E+ +F+ GD V +K    R ++  + +S KLAP F GP+ +++K     Y L LP
Sbjct: 1183 DMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLP 1238

[Close]
BLAST of CSPI04G10220 vs. TrEMBL
Match: Q9SQW9_ARATH (Putative retroelement pol polyprotein OS=Arabidopsis thaliana GN=F23H6.1 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.1e-78
Identity = 144/307 (46.91%), Postives = 207/307 (67.43%), Query Frame = 1 

Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            ++ E+YW  ++KD+ NY++ C ICQ NK  +  PAGLL P+PIP+ +  D S+DFVEGLP
Sbjct: 1221 LTSEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLP 1280

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
            +    N I+VVVDRLSK ++F+ L+HPF+AK V E FI  V++ HG P  +  DRD+ FL
Sbjct: 1281 SSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFL 1340

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            S FW ELF  +GT L++STA+HPQTDGQTE VNRCLE+YL C+   +PT W  ++P    
Sbjct: 1341 SGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEY 1400

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                  PP L+ YG+  + N  VE++LK+ D  L  L+EN+ +A
Sbjct: 1401 WYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIA 1460

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 282
            Q +MKK  D  RR+V FE+ + VYLKL+PYRQ S+A +++EKL+ +++GP++++ +I +V
Sbjct: 1461 QAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQV 1520

[Close]
BLAST of CSPI04G10220 vs. TrEMBL
Match: A0A151RRQ4_CAJCA (Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_033252 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.0e-77
Identity = 154/288 (53.47%), Postives = 199/288 (69.10%), Query Frame = 1 

Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            +S  +YW+ M+KDI+++V  C  CQRNK ++  PA LLQP+PIP  +  D SMDF+EGLP
Sbjct: 847  ISEVVYWEGMRKDIQHHVATCETCQRNKYQALSPARLLQPLPIPNQVWADISMDFIEGLP 906

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPKIHHDRDKKFLS 120
                 N I+VVVDRL+K A+F+ L HPF+AK+VAEVFI +V++ HG+     DRDK FLS
Sbjct: 907  KAQGKNVILVVVDRLTKYAHFLALSHPFTAKEVAEVFITEVVKLHGIVS---DRDKIFLS 966

Query: 121  NFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP----P 180
            +FW ELF   GT LK STA+HPQTDGQTE VNRCLETYL C    +P +W  ++      
Sbjct: 967  HFWSELFKLVGTRLKFSTAYHPQTDGQTEVVNRCLETYLRCLTGSKPKQWPKWLTLYGRD 1026

Query: 181  PPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFVDLKRREVQFEVGDA 240
            PP L+      S   EV  M  + D  L+ LKEN+  AQN+MKK+ D  RR V   +GD 
Sbjct: 1027 PPHLLKGTTIPSTVEEVNLMTYDRDQMLHDLKENLVTAQNQMKKYADQSRRAVSLAIGDW 1086

Query: 241  VYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLPLEA 285
            VYLKLKPYR RSLA KR+EK++P+FYGPY+I ++I  VA++L LP E+
Sbjct: 1087 VYLKLKPYRLRSLARKRNEKMSPRFYGPYQITKQIGVVAFQLALPPES 1131

[Close]
BLAST of CSPI04G10220 vs. TrEMBL
Match: D1GEG7_BRARP (Disease resistance protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.4e-76
Identity = 149/305 (48.85%), Postives = 200/305 (65.57%), Query Frame = 1 

Query: 6    YWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNV 65
            +W+ + + ++ YV +CNICQ +K  +  PAGLLQP+PIP  + ED SMDFVEGLP    V
Sbjct: 2301 HWEGLYQRVQKYVSECNICQTHKYSTLAPAGLLQPLPIPNRIWEDVSMDFVEGLPGSQGV 2360

Query: 66   NAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWK 125
            N IMVVVDRLSK A+FV L+HPF+A +VA  F+ +V++ HG P+ I  DRD+ FLS+FWK
Sbjct: 2361 NVIMVVVDRLSKYAHFVGLKHPFTAVEVASKFVSEVVKHHGFPRSIVSDRDRVFLSSFWK 2420

Query: 126  ELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP--------- 185
            +LF   GT LK STAFHPQTDGQTE +NRC+ETYL C+ +  P  WH F+          
Sbjct: 2421 DLFRASGTKLKYSTAFHPQTDGQTEVLNRCMETYLRCFASSHPRTWHKFLSWAELWYNTS 2480

Query: 186  ----------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMK 245
                             PP ++ + E  + N ++E  L+E D  L  +++++  AQ+ MK
Sbjct: 2481 FHTALKATPFQVVYGREPPAIVRFEEGSTNNYDLEMALRERDAMLVQIQQHLLRAQHLMK 2540

Query: 246  KFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLK 285
               D  RRE+ F VGD VYLKLKP+RQ ++  +  +KLA K++GPYEI E+I +VAYRLK
Sbjct: 2541 ASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISERIGKVAYRLK 2600

[Close]
BLAST of CSPI04G10220 vs. TrEMBL
Match: A5BEK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026680 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.4e-76
Identity = 142/307 (46.25%), Postives = 205/307 (66.78%), Query Frame = 1 

Query: 4    ELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDG 63
            E YW+ M+K+++ ++++C+ICQ+NK+E+  PAGLLQP+PIP  +  D S+DF+EGLP   
Sbjct: 1074 EFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSE 1133

Query: 64   NVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVP-KIHHDRDKKFLSNF 123
            + + IMVVVDRLSK A+F+ + HP++A ++A+VF+  + + HG+P  I  DRD  F S F
Sbjct: 1134 SYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTF 1193

Query: 124  WKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP------- 183
            WKELF  +GT+LK S+A+HPQTDGQTE VN+ +E YL C+  ++P  W  ++P       
Sbjct: 1194 WKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYN 1253

Query: 184  ------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNR 243
                              PPP LI Y    ++  EVE  LK  D  +  L+ N+ +AQ+R
Sbjct: 1254 TNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDR 1313

Query: 244  MKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYR 285
            MKKF D+K     F +GD VYL+L+PY+Q+S+  +R+ KL+P+FYGPY ++EKI  VAYR
Sbjct: 1314 MKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYR 1373

[Close]
BLAST of CSPI04G10220 vs. TrEMBL
Match: J3SDF5_BETVU (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.3e-75
Identity = 147/307 (47.88%), Postives = 202/307 (65.80%), Query Frame = 1 

Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            ++ E YW  M++++  YV QC ICQ+ K     P GLLQP+PIP L+ ED SMDF+EGLP
Sbjct: 1195 LAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLP 1254

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVP-KIHHDRDKKFL 120
                V+ I+V+VDRLSK A+F+TLRHPF+A  VA++F+ +V+R HG P  I  DRD+ FL
Sbjct: 1255 VSKGVDTILVIVDRLSKYAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSDRDRIFL 1314

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            S FWKELF   GT+LKRS+A+HPQTDGQTE VNR LETYL C+    P  W  ++P    
Sbjct: 1315 SLFWKELFRLHGTTLKRSSAYHPQTDGQTEIVNRALETYLRCFVGGHPRSWAKWLPWAEF 1374

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                  PP ++   + ++    +E ML++ D  ++ L+ N+  A
Sbjct: 1375 SYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRA 1434

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 282
            Q RMK + D  R EV+F+VGDAV+L+L+PYRQRSLA +  EKLAP+FYGP+ ++++I   
Sbjct: 1435 QQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGAT 1494

[Close]
BLAST of CSPI04G10220 vs. TAIR10
Match: AT1G36095.1 (AT1G36095.1 DNA binding)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-13
Identity = 57/144 (39.58%), Postives = 76/144 (52.78%), Query Frame = 1 

Query: 579 ADESSRK--DPAWKYGQLHNDQDINMFFCGFRSKVTKGGVYRMKQHLVGDYRNVTACTKC 638
           +DE S K  DP  KY Q    +    + C +  KVT GGV   KQH++G +RNVT C+  
Sbjct: 2   SDELSHKNLDPVKKYAQPVPLKH-GSWRCNYCHKVTNGGVKGAKQHILGGFRNVTQCSLV 61

Query: 639 PDHVKEEIKEYMSKKKEIKEQKNLILD--IDVEDYGIEDEDEGSVSVNNRATPSGPSLKK 698
           P  ++EEIK+ M KK EIK    ++       +DYG E+E+   V  N R     P +KK
Sbjct: 62  PPIMREEIKDSMLKKTEIKATTQMMPPPATSYDDYG-EEEEAAEVLGNERRQ---PPVKK 121

Query: 699 PRQKGPMDAFFTPNPETVVQNRKD 719
             QKG MD F  P    V++  KD
Sbjct: 122 --QKGLMDMFVCPTLPNVLKVLKD 138

[Close]
BLAST of CSPI04G10220 vs. NCBI nr
Match: gi|6466937|gb|AAF13073.1|AC011621_1 (putative retroelement pol polyprotein [Arabidopsis thaliana])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 144/307 (46.91%), Postives = 207/307 (67.43%), Query Frame = 1 

Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            ++ E+YW  ++KD+ NY++ C ICQ NK  +  PAGLL P+PIP+ +  D S+DFVEGLP
Sbjct: 1221 LTSEVYWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLP 1280

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFL 120
            +    N I+VVVDRLSK ++F+ L+HPF+AK V E FI  V++ HG P  +  DRD+ FL
Sbjct: 1281 SSNRFNCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFL 1340

Query: 121  SNFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP---- 180
            S FW ELF  +GT L++STA+HPQTDGQTE VNRCLE+YL C+   +PT W  ++P    
Sbjct: 1341 SGFWSELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEY 1400

Query: 181  ---------------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMA 240
                                  PP L+ YG+  + N  VE++LK+ D  L  L+EN+ +A
Sbjct: 1401 WYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEELLKDRDGMLVELRENLEIA 1460

Query: 241  QNRMKKFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEV 282
            Q +MKK  D  RR+V FE+ + VYLKL+PYRQ S+A +++EKL+ +++GP++++ +I +V
Sbjct: 1461 QAQMKKAADKSRRDVAFEIDEWVYLKLRPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQV 1520

[Close]
BLAST of CSPI04G10220 vs. NCBI nr
Match: gi|923923198|ref|XP_013730756.1| (PREDICTED: uncharacterized protein LOC106434427 [Brassica napus])

HSP 1 Score: 300.4 bits (768), Expect = 8.8e-78
Identity = 148/305 (48.52%), Postives = 207/305 (67.87%), Query Frame = 1 

Query: 6    YWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNV 65
            +W  M K I+ YV  C +CQ +K  +  PAGLLQP+PIPE + ED +MDF+EGLPT    
Sbjct: 1199 FWKGMYKQIRQYVASCAVCQTHKHSTLSPAGLLQPLPIPEKVWEDINMDFIEGLPTSNGY 1258

Query: 66   NAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWK 125
            N I+VV+D+LSK A+F++ +HPF+A  VA+ F+D+V++ HG PK I  DRD+ FLS+FW 
Sbjct: 1259 NVILVVIDKLSKFAHFLSFKHPFTALDVAKKFVDEVVKLHGFPKSIVSDRDRIFLSSFWT 1318

Query: 126  ELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP--------- 185
            E+F   GT+LK STAFHPQTDGQ+E +NRCLETYL C+ +  P  WH ++          
Sbjct: 1319 EVFRLSGTTLKYSTAFHPQTDGQSEVLNRCLETYLRCFSSSHPRSWHTYLAWAQLWYNTT 1378

Query: 186  ----------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMK 245
                             PPPL+ +    + N ++++ L+E D +L+ALKEN+  AQ+ MK
Sbjct: 1379 YHKSLQTTPFKVLFGRDPPPLLRFESGSTTNFQLDRALQERDDALDALKENLLRAQDIMK 1438

Query: 246  KFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLK 285
               D  RREV+F VGD VYLKL+PYRQ+S+  + ++KLA KF+GPY++IE++ +VAY+L+
Sbjct: 1439 SQADKSRREVEFVVGDMVYLKLQPYRQKSVVKRFNQKLAAKFFGPYKVIERVGKVAYKLE 1498

[Close]
BLAST of CSPI04G10220 vs. NCBI nr
Match: gi|729344250|ref|XP_010541181.1| (PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 151/302 (50.00%), Postives = 197/302 (65.23%), Query Frame = 1 

Query: 6    YWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNV 65
            +W  MK DIK YV +C +CQ  K  +  PAGLLQP+PIPE + ED SMDF+EGLP     
Sbjct: 1365 HWVGMKADIKKYVAECAVCQSQKYSTLAPAGLLQPLPIPEHIWEDISMDFIEGLPRSAGY 1424

Query: 66   NAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWK 125
            N ++VVVDRLSK A+F+ L+HPF+A  VA+VF+ +V+R HG PK I  DRDK FLSNFW 
Sbjct: 1425 NVVLVVVDRLSKYAHFIALKHPFTAMVVAKVFVQEVVRLHGFPKSIVSDRDKVFLSNFWS 1484

Query: 126  ELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP--------- 185
            ELF   GT LK STA+HPQTDGQTE +NRCLETYL CY N+ P KW  F+          
Sbjct: 1485 ELFRIAGTKLKFSTAYHPQTDGQTEVLNRCLETYLRCYANDHPRKWIQFLSWAEFWYNTS 1544

Query: 186  ----------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMK 245
                             PP L+ Y E  + N E+E+ L+E D  +  +K+ +  AQ RMK
Sbjct: 1545 FHTALQSTPFQIVYGREPPTLLKYEEGSTSNFELEKALRERDRMILEIKQKLQAAQQRMK 1604

Query: 246  KFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLK 282
               D  RR++   VG+ VYLK++PYRQ +LA + ++KLA ++YGP++I  ++ EVAY+LK
Sbjct: 1605 VSADKGRRDLTLTVGEWVYLKIRPYRQNTLAARSNQKLAARYYGPFQIESRMGEVAYKLK 1664

[Close]
BLAST of CSPI04G10220 vs. NCBI nr
Match: gi|1012333858|gb|KYP45237.1| (Retrotransposable element Tf2 [Cajanus cajan])

HSP 1 Score: 297.7 bits (761), Expect = 5.7e-77
Identity = 154/288 (53.47%), Postives = 199/288 (69.10%), Query Frame = 1 

Query: 1    MSGELYWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLP 60
            +S  +YW+ M+KDI+++V  C  CQRNK ++  PA LLQP+PIP  +  D SMDF+EGLP
Sbjct: 847  ISEVVYWEGMRKDIQHHVATCETCQRNKYQALSPARLLQPLPIPNQVWADISMDFIEGLP 906

Query: 61   TDGNVNAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPKIHHDRDKKFLS 120
                 N I+VVVDRL+K A+F+ L HPF+AK+VAEVFI +V++ HG+     DRDK FLS
Sbjct: 907  KAQGKNVILVVVDRLTKYAHFLALSHPFTAKEVAEVFITEVVKLHGIVS---DRDKIFLS 966

Query: 121  NFWKELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP----P 180
            +FW ELF   GT LK STA+HPQTDGQTE VNRCLETYL C    +P +W  ++      
Sbjct: 967  HFWSELFKLVGTRLKFSTAYHPQTDGQTEVVNRCLETYLRCLTGSKPKQWPKWLTLYGRD 1026

Query: 181  PPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMKKFVDLKRREVQFEVGDA 240
            PP L+      S   EV  M  + D  L+ LKEN+  AQN+MKK+ D  RR V   +GD 
Sbjct: 1027 PPHLLKGTTIPSTVEEVNLMTYDRDQMLHDLKENLVTAQNQMKKYADQSRRAVSLAIGDW 1086

Query: 241  VYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLKLPLEA 285
            VYLKLKPYR RSLA KR+EK++P+FYGPY+I ++I  VA++L LP E+
Sbjct: 1087 VYLKLKPYRLRSLARKRNEKMSPRFYGPYQITKQIGVVAFQLALPPES 1131

[Close]
BLAST of CSPI04G10220 vs. NCBI nr
Match: gi|227438239|gb|ACP30609.1| (disease resistance protein [Brassica rapa subsp. pekinensis])

HSP 1 Score: 294.7 bits (753), Expect = 4.8e-76
Identity = 149/305 (48.85%), Postives = 200/305 (65.57%), Query Frame = 1 

Query: 6    YWDRMKKDIKNYVEQCNICQRNKTESTLPAGLLQPIPIPELMLEDWSMDFVEGLPTDGNV 65
            +W+ + + ++ YV +CNICQ +K  +  PAGLLQP+PIP  + ED SMDFVEGLP    V
Sbjct: 2301 HWEGLYQRVQKYVSECNICQTHKYSTLAPAGLLQPLPIPNRIWEDVSMDFVEGLPGSQGV 2360

Query: 66   NAIMVVVDRLSKCAYFVTLRHPFSAKQVAEVFIDKVIRKHGVPK-IHHDRDKKFLSNFWK 125
            N IMVVVDRLSK A+FV L+HPF+A +VA  F+ +V++ HG P+ I  DRD+ FLS+FWK
Sbjct: 2361 NVIMVVVDRLSKYAHFVGLKHPFTAVEVASKFVSEVVKHHGFPRSIVSDRDRVFLSSFWK 2420

Query: 126  ELFSPKGTSLKRSTAFHPQTDGQTERVNRCLETYLACYYNEQPTKWHMFIP--------- 185
            +LF   GT LK STAFHPQTDGQTE +NRC+ETYL C+ +  P  WH F+          
Sbjct: 2421 DLFRASGTKLKYSTAFHPQTDGQTEVLNRCMETYLRCFASSHPRTWHKFLSWAELWYNTS 2480

Query: 186  ----------------PPPPLISYGERKSRNNEVEQMLKETDLSLNALKENMNMAQNRMK 245
                             PP ++ + E  + N ++E  L+E D  L  +++++  AQ+ MK
Sbjct: 2481 FHTALKATPFQVVYGREPPAIVRFEEGSTNNYDLEMALRERDAMLVQIQQHLLRAQHLMK 2540

Query: 246  KFVDLKRREVQFEVGDAVYLKLKPYRQRSLAIKRSEKLAPKFYGPYEIIEKIDEVAYRLK 285
               D  RRE+ F VGD VYLKLKP+RQ ++  +  +KLA K++GPYEI E+I +VAYRLK
Sbjct: 2541 ASADKHRRELSFAVGDWVYLKLKPFRQHTVVRRYCQKLAAKYFGPYEISERIGKVAYRLK 2600

The following BLAST results are available for this feature:
BLAST of CSPI04G10220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TF211_SCHPO6.2e-3935.00Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF212_SCHPO6.2e-3935.00Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF21_SCHPO6.2e-3935.00Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF22_SCHPO6.2e-3935.00Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF23_SCHPO6.2e-3935.00Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of CSPI04G10220 vs. TrEMBL
Match NameE-valueIdentityDescription
Q9SQW9_ARATH2.1e-7846.91Putative retroelement pol polyprotein OS=Arabidopsis thaliana GN=F23H6.1 PE=4 SV... [more]
A0A151RRQ4_CAJCA4.0e-7753.47Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_033252 PE=4 SV=1[more]
D1GEG7_BRARP3.4e-7648.85Disease resistance protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A5BEK1_VITVI4.4e-7646.25Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026680 PE=4 SV=1[more]
J3SDF5_BETVU1.3e-7547.88Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1[more]
BLAST of CSPI04G10220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G36095.16.2e-1339.58 DNA binding[more]
BLAST of CSPI04G10220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|6466937|gb|AAF13073.1|AC011621_13.0e-7846.91putative retroelement pol polyprotein [Arabidopsis thaliana][more]
gi|923923198|ref|XP_013730756.1|8.8e-7848.52PREDICTED: uncharacterized protein LOC106434427 [Brassica napus][more]
gi|729344250|ref|XP_010541181.1|1.1e-7750.00PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana][more]
gi|1012333858|gb|KYP45237.1|5.7e-7753.47Retrotransposable element Tf2 [Cajanus cajan][more]
gi|227438239|gb|ACP30609.1|4.8e-7648.85disease resistance protein [Brassica rapa subsp. pekinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G10220.1CSPI04G10220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 49..157
score: 7.2
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 38..225
score: 16
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 47..170
score: 1.3
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 40..174
score: 6.07
NoneNo IPR availableunknownCoilCoilcoord: 190..224
score: -coord: 640..660
scor
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 6..281
score: 4.6E
NoneNo IPR availablePANTHERPTHR24559:SF186SUBFAMILY NOT NAMEDcoord: 6..281
score: 4.6E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G10220Cucumber (Gy14) v2cgybcpiB168
CSPI04G10220Cucumber (Chinese Long) v3cpicucB213
CSPI04G10220Watermelon (97103) v2cpiwmbB337
CSPI04G10220Wax gourdcpiwgoB371
CSPI04G10220Wax gourdcpiwgoB375
CSPI04G10220Cucurbita maxima (Rimu)cmacpiB265
CSPI04G10220Cucurbita maxima (Rimu)cmacpiB479
CSPI04G10220Cucurbita moschata (Rifu)cmocpiB252
CSPI04G10220Cucurbita moschata (Rifu)cmocpiB469
CSPI04G10220Cucumber (Chinese Long) v2cpicuB182
CSPI04G10220Melon (DHL92) v3.5.1cpimeB313
CSPI04G10220Melon (DHL92) v3.5.1cpimeB332
CSPI04G10220Watermelon (Charleston Gray)cpiwcgB347
CSPI04G10220Watermelon (97103) v1cpiwmB312
CSPI04G10220Cucurbita pepo (Zucchini)cpecpiB569
CSPI04G10220Cucurbita pepo (Zucchini)cpecpiB619
CSPI04G10220Bottle gourd (USVL1VR-Ls)cpilsiB312
CSPI04G10220Melon (DHL92) v3.6.1cpimedB304