CSPI04G09230 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G09230
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transposon TX1 uncharacterized
Location	Chr4 : 7059752 .. 7061881 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTTAAAAAATGCAAAAGATTGTGGAATATAGAAGGGGATGAGAATACCGCTTTCTTTCATAAAATTTGTTCTGCCAGGAAAAGGAGTATCATTACAAGCATTGTTGATAACAATGGGGTTCTTTGTACCAACAACAATGATATTATTAAAGCTTTCCCTAGGCATTTTGAGAATATCTATAGAGACAATGACAAAGAGCTTTGGCTTATTGAAAATTTACATTGGTCTCCTATCTTTTCCATGACTCAAGAAGAACTTTGCAAACCATTTATAGAACAAGAGATCTTTCTTTCGCTTAAATGGTTCTCTAACAACAAAACACCGAGGCCGAATGGATTTACTATAAAGCTCTTCAAATCATCTTGGAAGTTCATTAAACGGCAGATTTTGGAAGTTTTCACAGATTTTCACAAAAATGATATCATCAACAAGGTTGTGAATTATACTTACATTGCATTAATTGATAAAAATGATAAATGCTCCTTGACCACTGATTTCAGACCCATTAGTTTCACAACTACTCTCTACAAGCTGATGACAAAGGTTATGGCTGAAAGGTTAAAAAGCACCTTACCCAAAATTGTCTCTAAAAAAAATGGTTTTTGTCAAAGATAGACAGATAACAGATGCCATTTTGATTACAAACGAAGCAGTAGATTATTGGAAAACCAAGAAGGTTAAAGGCTACATTATCAAGTTCGACATCGAAAAGGCCTTTCACAAATTAAATGGCAGCTCATTGAATTCATGTTGTTGAAAAAAGGCTTCCCTCATAAATGGAGAAAATGGATAAAGTCTTCTGTTAGCAGCGTTCAATACTGATCAATCATTATATATGGAGGCCCCAAGGGTGAAATACAACCAACGAGAGGCATTCGACAAGGTGACCCATTATCTCCCTTTCTTTTTATACTTGATATGGACTACTTGAGCAGATTTCTTAGTCATCTTGAAGAAATGGGTAAGTTAAAGGGGGTCAGATTCAACGATGATCAAAATGTTACTCATTTGCTGTTTGCGAATGACATATTATTGTTTATCAAAGACCATGATGAATCGATTGATAATATGAGATTTGATATCCACCTCTTTGAACTTGTTTCAGGTCTAAATGTCAACATGAACAAGTCTATGATCTCCTTGATAAACGTTGACTCTCATAGAACAAATTGTGTGGCTACAAAATGGTGGCTTACATCTCAGTTCCTTCCAATCAACTACTTAGGTGTCCCATTGGGAGGTAAACCTCTCTCTAAAAATTTTCGGGCTGAAGTTTATGAAAAATCCACAGAAAAATAAAATAACTGGAAATATTCTTTATCTTTCTAAAGGTGGTAAAATCACTTTGATCAACCCCCCACTCTTGCTAGTCTTCCAACATATCAACTATCTGTTTTTAAGGCCCTTATAAATGTCTGTAAAAATATTGAAAAGGCTTGGAGGAATTTGCTTTGGAAGAATTCAATAGATAAAAATGATATTTATCTTATGAGGTGGTCAGTCATTACAACCTCCAAAGAAAAGGATGGCCTTGGCATAAATCGTGTTATAGATACAGTTTTTTTCCTTCTTTGCAAATGGCTTTGTGGATTCCACTATGAAAAAAGCCCTTTGTGGAAGTGCATCATCTTGGCTAAATATGATCAATCATTTGTTGGAGAAATTCCGATGAAGGGCAAATACTGCAGTCTCAAAGCTCCTTGGTTATCTATTATTAAGGGAGTGGATTGGTTCATTTCCCATATTCATTGGAAGATAAATGAAGGTGCTTCCCTTTCTTTCCGGAAGACATTATGGCATGAAAATAGCCCTCTACACCTATGCAGACCCAGACTTTTCGCCCTCTCTACAAAGCAAAATGGTACTATAAAAGATCTTTGGAACCCTAACACCCTTGAATGGGACATTAATCTGATAAGAAATCTAAGGGATCAGGAATTGCAACAATGGGAAAAGTTGAGAACTACCTTGCCTGTCCCTGAACACAATCATGGCACTAATATCCCCATATGGAAGCTGAACTCAAATGGGATCTTCTCCATTGCCTCTGTTAAAAAAGCTTTGCAAGCAAATGGGCAGTGTATTGAAATATCGGATTCCTTTGTCTTTGTCATGGAAGACTAG

mRNA sequence

ATGTGGGTTAAAAAATGCAAAAGATTGTGGAATATAGAAGGGGATGAGAATACCGCTTTCTTTCATAAAATTTGTTCTGCCAGGAAAAGGAGTATCATTACAAGCATTGTTGATAACAATGGGGTTCTTTGTACCAACAACAATGATATTATTAAAGCTTTCCCTAGGCATTTTGAGAATATCTATAGAGACAATGACAAAGAGCTTTGGCTTATTGAAAATTTACATTGGTCTCCTATCTTTTCCATGACTCAAGAAGAACTTTGCAAACCATTTATAGAACAAGAGATCTTTCTTTCGCTTAAATGGTTCTCTAACAACAAAACACCGAGGCCGAATGGATTTACTATAAAGCTCTTCAAATCATCTTGGAAGTTCATTAAACGGCAGATTTTGGAAGTTTTCACAGATTTTCACAAAAATGATATCATCAACAAGGTTGTGAATTATACTTACATTGCATTAATTGATAAAAATGATAAATGCTCCTTGACCACTGATTTCAGACCCATTAGTTTCACAACTACTCTCTACAAGCTGATGACAAAGATAACAGATGCCATTTTGATTACAAACGAAGCAGTAGATTATTGGAAAACCAAGAAGGTTAAAGGCTACATTATCAAGTTCGACATCGAAAAGGCCTTTCACAAATTAAATGGCAGCTCATTGAATTCATGCCCCAAGGGTGAAATACAACCAACGAGAGGCATTCGACAAGGTGACCCATTATCTCCCTTTCTTTTTATACTTGATATGGACTACTTGAGCAGATTTCTTAGTCATCTTGAAGAAATGGGTAAGTTAAAGGGGGTCAGATTCAACGATGATCAAAATGTTACTCATTTGCTGTTTGCGAATGACATATTATTGTTTATCAAAGACCATGATGAATCGATTGATAATATGAGATTTGATATCCACCTCTTTGAACTTGTTTCAGGTCTAAATGTCAACATGAACAAGTCTATGATCTCCTTGATAAACGTTGACTCTCATAGAACAAATTGTGTGGCTACAAAATGGTGGCTTACATCTCAGTTCCTTCCAATCAACTACTTAGGTGTCCCATTGGGAGTCATTACAACCTCCAAAGAAAAGGATGGCCTTGGCATAAATCGTGTTATAGATACAGTTTTTTTCCTTCTTTGCAAATGGCTTTGTGGATTCCACTATGAAAAAAGCCCTTTGTGGAAGTGCATCATCTTGGCTAAATATGATCAATCATTTGTTGGAGAAATTCCGATGAAGGGCAAATACTGCAGTCTCAAAGCTCCTTGGTTATCTATTATTAAGGGAGTGGATTGGTTCATTTCCCATATTCATTGGAAGATAAATGAAGGTGCTTCCCTTTCTTTCCGGAAGACATTATGGCATGAAAATAGCCCTCTACACCTATGCAGACCCAGACTTTTCGCCCTCTCTACAAAGCAAAATGGTACTATAAAAGATCTTTGGAACCCTAACACCCTTGAATGGGACATTAATCTGATAAGAAATCTAAGGGATCAGGAATTGCAACAATGGGAAAAGTTGAGAACTACCTTGCCTGTCCCTGAACACAATCATGGCACTAATATCCCCATATGGAAGCTGAACTCAAATGGGATCTTCTCCATTGCCTCTGTTAAAAAAGCTTTGCAAGCAAATGGGCAGTGTATTGAAATATCGGATTCCTTTGTCTTTGTCATGGAAGACTAG

Coding sequence (CDS)

ATGTGGGTTAAAAAATGCAAAAGATTGTGGAATATAGAAGGGGATGAGAATACCGCTTTCTTTCATAAAATTTGTTCTGCCAGGAAAAGGAGTATCATTACAAGCATTGTTGATAACAATGGGGTTCTTTGTACCAACAACAATGATATTATTAAAGCTTTCCCTAGGCATTTTGAGAATATCTATAGAGACAATGACAAAGAGCTTTGGCTTATTGAAAATTTACATTGGTCTCCTATCTTTTCCATGACTCAAGAAGAACTTTGCAAACCATTTATAGAACAAGAGATCTTTCTTTCGCTTAAATGGTTCTCTAACAACAAAACACCGAGGCCGAATGGATTTACTATAAAGCTCTTCAAATCATCTTGGAAGTTCATTAAACGGCAGATTTTGGAAGTTTTCACAGATTTTCACAAAAATGATATCATCAACAAGGTTGTGAATTATACTTACATTGCATTAATTGATAAAAATGATAAATGCTCCTTGACCACTGATTTCAGACCCATTAGTTTCACAACTACTCTCTACAAGCTGATGACAAAGATAACAGATGCCATTTTGATTACAAACGAAGCAGTAGATTATTGGAAAACCAAGAAGGTTAAAGGCTACATTATCAAGTTCGACATCGAAAAGGCCTTTCACAAATTAAATGGCAGCTCATTGAATTCATGCCCCAAGGGTGAAATACAACCAACGAGAGGCATTCGACAAGGTGACCCATTATCTCCCTTTCTTTTTATACTTGATATGGACTACTTGAGCAGATTTCTTAGTCATCTTGAAGAAATGGGTAAGTTAAAGGGGGTCAGATTCAACGATGATCAAAATGTTACTCATTTGCTGTTTGCGAATGACATATTATTGTTTATCAAAGACCATGATGAATCGATTGATAATATGAGATTTGATATCCACCTCTTTGAACTTGTTTCAGGTCTAAATGTCAACATGAACAAGTCTATGATCTCCTTGATAAACGTTGACTCTCATAGAACAAATTGTGTGGCTACAAAATGGTGGCTTACATCTCAGTTCCTTCCAATCAACTACTTAGGTGTCCCATTGGGAGTCATTACAACCTCCAAAGAAAAGGATGGCCTTGGCATAAATCGTGTTATAGATACAGTTTTTTTCCTTCTTTGCAAATGGCTTTGTGGATTCCACTATGAAAAAAGCCCTTTGTGGAAGTGCATCATCTTGGCTAAATATGATCAATCATTTGTTGGAGAAATTCCGATGAAGGGCAAATACTGCAGTCTCAAAGCTCCTTGGTTATCTATTATTAAGGGAGTGGATTGGTTCATTTCCCATATTCATTGGAAGATAAATGAAGGTGCTTCCCTTTCTTTCCGGAAGACATTATGGCATGAAAATAGCCCTCTACACCTATGCAGACCCAGACTTTTCGCCCTCTCTACAAAGCAAAATGGTACTATAAAAGATCTTTGGAACCCTAACACCCTTGAATGGGACATTAATCTGATAAGAAATCTAAGGGATCAGGAATTGCAACAATGGGAAAAGTTGAGAACTACCTTGCCTGTCCCTGAACACAATCATGGCACTAATATCCCCATATGGAAGCTGAACTCAAATGGGATCTTCTCCATTGCCTCTGTTAAAAAAGCTTTGCAAGCAAATGGGCAGTGTATTGAAATATCGGATTCCTTTGTCTTTGTCATGGAAGACTAG

Homology

[Close]

BLAST of CSPI04G09230 vs. Swiss-Prot
Match: M1250_ARATH (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.1e-11
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1


Query: 224 LNSCPKGEIQPTRGIRQGDPLSPFLFILDMDYLSRFLSHLEEMGKLKGVRF-NDDQNVTH 283
           +N  P+G + P+RG+RQGDPLSP+LFIL  + LS      +E G+L G+R  N+   + H
Sbjct: 14  INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINH 73

Query: 284 LLFAND 289
           LLFA+D
Sbjct: 74  LLFADD 79

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BLAST of CSPI04G09230 vs. Swiss-Prot
Match: LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-07
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 1


Query: 219 LNGSSLNSCPKGEIQPTRGIRQGDPLSPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ 278
           LNG  L + P        G RQG PLSP LF + ++ L+R +   +E   +KG++   ++
Sbjct: 643 LNGQKLEAFPL-----KTGTRQGCPLSPLLFNIVLEVLARAIRQEKE---IKGIQLGKEE 702

Query: 279 NVTHLLFANDILLFIKDHDESIDNMRFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCV 338
            V   LFA+D+++++++   S  N+   I  F  VSG  +N+ KS   L N +    + +
Sbjct: 703 -VKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQI 762

Query: 339 ATKWWLTSQFLPINYLGVPL 359
             +   T     I YLG+ L
Sbjct: 763 MGELPFTIASKRIKYLGIQL 773

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BLAST of CSPI04G09230 vs. Swiss-Prot
Match: LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-06
Identity = 43/141 (30.50%), Postives = 68/141 (48.23%), Query Frame = 1


Query: 218 KLNGSSLNSCPKGEIQPTRGIRQGDPLSPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDD 277
           K+NG  L + P        G RQG PLSP+LF + ++ L+R +   +E   +KG++   +
Sbjct: 649 KVNGEKLEAIPLKS-----GTRQGCPLSPYLFNIVLEVLARAIRQQKE---IKGIQIGKE 708

Query: 278 QNVTHLLFANDILLFIKDHDESIDNMRFDIHLFELVSGLNVNMNKSMISLINVDSHRTNC 337
           + V   L A+D++++I D   S   +   I+ F  V G  +N NKSM  L   +      
Sbjct: 709 E-VKISLLADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKE 768

Query: 338 VATKWWLTSQFLPINYLGVPL 359
           +      +     I YLGV L
Sbjct: 769 IRETTPFSIVTNNIKYLGVTL 780

[Close]

BLAST of CSPI04G09230 vs. TrEMBL
Match: A5BZP6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014700 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 169/579 (29.19%), Postives = 264/579 (45.60%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARK-RSIITSIVDNNGVLCTNNNDIIKAFPRHFEN 61
           W +K K  W  +GD N+  FHK+ + R+ R+ I  + +  G++  N+  I +    +F+ 
Sbjct: 71  WRQKVKVKWVKDGDCNSKLFHKVANGRRNRNFIKFLENERGLVLDNSESITEEILLYFKK 130

Query: 62  IYRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLF 121
           +Y     E W +E + WSPI   +   L  PF E+EIF  +     +K P P+GFTI +F
Sbjct: 131 LYSSPLGESWRVEGIDWSPISKESASRLDSPFAEEEIFNVIFQLDRDKAPGPDGFTIAVF 190

Query: 122 KSSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKL 181
           +  W  IK  ++ VF +FH + IIN+  N ++I  + K  +    +DFRPIS  T LYK+
Sbjct: 191 QDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIVFLPKKSQSKKISDFRPISPITCLYKV 250

Query: 182 MTK--------------------------ITDAILITNEAVDYWKTKKVKGYIIKFDIEK 241
           + K                          I DA+LI NE VD  +    +G + K D EK
Sbjct: 251 IAKVLSGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRSGEEGVVFKIDFEK 310

Query: 242 AFHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPL 301
           A+  +    L                              N   KG ++ +RG+RQGDPL
Sbjct: 311 AYDHVKWDFLDHVLEKKGFSSKWRSWMRGCLSSVSYAILVNGNAKGWVKASRGLRQGDPL 370

Query: 302 SPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ-NVTHLLFANDILLFIKDHDESIDNM 361
           S FLF +  D L R L   EE   L+G R   ++  V+HL FA+D +LF    +E +  +
Sbjct: 371 SHFLFTIVADVLXRMLLKAEERSLLEGFRVGKNRCRVSHLQFADDTILFANSREEELQTL 430

Query: 362 RFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVI-- 421
           +  + +F  +SGL VN++KS +  IN+D +  +              +  LG    +I  
Sbjct: 431 KSLLLVFGQMSGLKVNLDKSNLFGINLDQNHLSSGCKSREDAKGLSLVQGLGKAKEIILL 490

Query: 422 -----TTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPM 481
                   + K GLGI ++      LL KWL  F  E + LW  +IL+ Y     G    
Sbjct: 491 RWDAVCKPRVKVGLGIGKIPLRNRALLGKWLWRFPRESTTLWHQVILSIYGTHSNGWDAN 550

Query: 482 KGKYCSLKAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCRPRLFALST 513
                S + PW +I +    F  +  + + +G  + F + LW E+       PRL+ +  
Sbjct: 551 TVVRWSHRCPWKAIAQVFQDFSKYTRFXVGDGERIRFWEDLWWEDQIFKDQYPRLYQVVM 610

[Close]

BLAST of CSPI04G09230 vs. TrEMBL
Match: A5AK13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026287 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.9e-62
Identity = 181/601 (30.12%), Postives = 263/601 (43.76%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARKRSIITSIVDNNGVLCTNNNDIIKAFPRHFENI 61
           W +K + +W  EGD+NT +FHK+ +AR R                         ++F + 
Sbjct: 310 WRQKSREIWLKEGDKNTKYFHKMANARAR-------------------------KNFLSK 369

Query: 62  YRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLFK 121
            R N++    I  L++  +       L   F E+EIF +L     NK P P+GFT+  + 
Sbjct: 370 IRINERPK--INGLNFKELGEGLANSLEVVFSEEEIFAALSSCCGNKAPSPDGFTMAFWL 429

Query: 122 SSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLM 181
             W  +K +ILE+F +FH +    + +N T++ LI K +      DFRPIS   ++YKL+
Sbjct: 430 FCWDVVKSEILELFREFHLHGTFQRSLNSTFLLLIPKKEGAEDLRDFRPISLVGSVYKLL 489

Query: 182 TKIT--------------------------DAILITNEAVDYWKTKKVKGYIIKFDIEKA 241
            K+                           DA+LI NEA+D      V G ++K DIEKA
Sbjct: 490 AKVVTNRLKSVMGEVISDSQQAFVHGRQILDAVLIANEALDSRLKDNVXGLLLKLDIEKA 549

Query: 242 FHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPLS 301
           F  +N + L                              N CP G  + +RG+RQGDPLS
Sbjct: 550 FDHVNWNXLIDVMSRMGFGHKWINWMKWCWSTATFSILINGCPTGFFRSSRGLRQGDPLS 609

Query: 302 PFLFILDMDYLSRFLSHLEEMGKLKGV----RFNDDQNVTHLLFANDILLFIKDHDESID 361
           P+LF+  M+ LS+ LS     G   G     R  +   V+H LFA+D L+F       + 
Sbjct: 610 PYLFLFAMEALSQLLSRARNEGFFSGFKVGGRGREGLIVSHXLFADDTLIFCDADAVQLQ 669

Query: 362 NMRFDIHLFELVSGLNVNMNK----------SMISLINVDSHRTNCVATKWWLTSQFLPI 421
            + +    FE +SGL VN++K           M SL+++   +  C           LP 
Sbjct: 670 YLSWTFMWFEAISGLKVNLSKFEAIPVGECPPMESLVSILGCKIGC-----------LPT 729

Query: 422 NYLGVPLG-------VITTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILA 481
           +YLG+PLG       VI  +K+  GLGI  +      LL KWL  F  E   LWK II +
Sbjct: 730 SYLGLPLGAPYKSTSVICAAKKDGGLGIRNLAIFNKALLGKWLWRFANENESLWKQIISS 789

Query: 482 KYDQSFVGEIPMKGKYCSL-------KAPWLSIIKGVDWFISHIHWKINEGASLSFRKTL 517
           KYD          G +CS           W +I  G + F SH  + + +G  + F K L
Sbjct: 790 KYDL-------QDGGWCSKGVRDRYGVGVWKAIRNGWENFRSHSRFLVGDGTRVKFWKDL 849

[Close]

BLAST of CSPI04G09230 vs. TrEMBL
Match: A5B7Z9_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_022758 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61
Identity = 169/606 (27.89%), Postives = 272/606 (44.88%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARK-RSIITSIVDNNGVLCTNNNDIIKAFPRHFEN 61
           W +K K  W  +GD N+  FHK+ + R+ R+ I  + +  G++  N+  I +    +F+ 
Sbjct: 186 WRQKAKVKWVKDGDCNSKLFHKVANERRNRNFIKLLENERGLVLDNSESITEEILLYFKK 245

Query: 62  IYRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLF 121
           +Y     E W +E + WSPI       L  PF E EI+ ++     +K P P+GFTI +F
Sbjct: 246 LYSSPPGESWSVEGIDWSPISEERASRLDSPFSEVEIYNAIFQLDRDKAPGPDGFTIAVF 305

Query: 122 KSSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKL 181
           +  W  IK  ++ VF +FH + IIN+  N ++I L+ K  +    +DFRPIS  T LYK+
Sbjct: 306 QDCWDVIKDDLVRVFAEFHNSGIINQNTNASFIVLLPKKSQSKKISDFRPISLITCLYKV 365

Query: 182 MTK--------------------------ITDAILITNEAVDYWKTKKVKGYIIKFDIEK 241
           +TK                          I DA+LI NE VD  +    +G + K D EK
Sbjct: 366 ITKFLSGRLRGVLQETIHSTQGAFVKGRQILDAVLIANEIVDEKRQSGEEGVVFKIDFEK 425

Query: 242 AFHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPL 301
           A+  +    L                              N   KG ++ +RG+RQGDPL
Sbjct: 426 AYDHVKWDFLDHVLEKKGFSPKWRKWMRGCLSSVSYAILVNDNAKGWVKASRGLRQGDPL 485

Query: 302 SPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ-NVTHLLFANDILLFIKDHDESIDNM 361
           SPFLF +  D LSR L   EE   L+G R   ++  V+HL FA+D + F    +E +  +
Sbjct: 486 SPFLFTIVADVLSRMLLKAEERSLLEGFRVGRNRCRVSHLQFADDTIFFANSSEEELQTL 545

Query: 362 RFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVITT 421
           +  + +F  VSGL VN++KS +  IN+D    +     W    +    ++ G  LG    
Sbjct: 546 KSLLLVFGQVSGLKVNLDKSNLFGINLDQDHLSRFLLXWLQKLRGCKXSFFGQGLG---- 605

Query: 422 SKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPMKGKYCSL 481
            K K+ + ++ ++  +  +      G H   S  W    L ++               S 
Sbjct: 606 -KAKETILLDGMLCVILXIY-----GTH---SNGWDANTLVRW---------------SH 665

Query: 482 KAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCRPRLFALSTKQNGTIK 541
           + PW +I +    F  +    +  G  + F + LW  +       PRLF +   ++  I 
Sbjct: 666 RCPWKAIAQVFQDFSKYTRLVVGNGERIRFWEDLWWGDQIFKDQYPRLFRVVMDKSVPIY 725

Query: 542 D-LWNPNTLEWDINLIRNLRDQELQQWEKLRTTLPVPE-HNHGTNIPIWKLNSNGIFSIA 548
             L +     W+ N  R+L D E++  E+L  ++         ++   W L S+G+F++ 
Sbjct: 726 SILGSDRPFSWNFNFRRSLTDYEIKDLERLMRSIDCMNLFTSASDARSWSLLSSGLFTVK 763

[Close]

BLAST of CSPI04G09230 vs. TrEMBL
Match: A5B2E0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029931 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 169/623 (27.13%), Postives = 280/623 (44.94%), Query Frame = 1


Query: 2    WVKKCKRLWNIEGDENTAFFHKICSARKRSIITSIVDNNGVLCTNNNDIIKAFPRHFENI 61
            W +  + LW  EGD+N+ FFH++ +A +R+     +  NGV  T   ++ +   ++F+ +
Sbjct: 1081 WRQMSRELWLKEGDKNSGFFHRMANAHRRTNSMDRIKINGVWRTEEQEVREGIVQNFQQL 1140

Query: 62   YRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLFK 121
              +       IE LH   + +   E L  PF  +EI  +L   + +K P P+GFT   ++
Sbjct: 1141 LTEEPSWRADIEGLHLPRLNTCEAEGLEVPFTMEEIHSALMDMNGDKAPGPDGFTGAFWQ 1200

Query: 122  SSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLM 181
            + W+F+K +I+++F +F       K +N T++ LI K        +FRPIS    LYKL+
Sbjct: 1201 TCWEFVKEEIMDLFKEFFVQKSFAKSLNTTFLVLIPKKGGAEDLGEFRPISLLGGLYKLV 1260

Query: 182  T--------------------------KITDAILITNEAVDYWKTKKVKGYIIKFDIEKA 241
                                       +I DA LI NE VD+W  +K KG I K DIEKA
Sbjct: 1261 AKVLANRLKKVLGKVVSMDQNAFVRGRQILDASLIANEVVDFWYKRKEKGLICKLDIEKA 1320

Query: 242  FHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPLS 301
            +  +N + L                              N  P G    ++G+RQGDPLS
Sbjct: 1321 YDSINWNFLMKVLQKMGFGSRWMEWIWWCISTAKFSILVNGVPAGFFPSSKGLRQGDPLS 1380

Query: 302  PFLFILDMDYLSRFLSHLEEMGKLKGVRFNDD----QNVTHLLFANDILLFIKDHDESID 361
            P+LF++ M+ LS  +      G + G            V+HLLFA+D ++F +   E + 
Sbjct: 1381 PYLFVMGMEVLSALIRRAVGGGFVSGCSLKGRGGLVMEVSHLLFADDTIIFCEAKKEYLT 1440

Query: 362  NMRFDIHLFELVSGLNVNMNK----SMISLINVDSHRTNCVATK---------WWLTSQF 421
            ++ + +  FE  SGL+   ++    + I +  +   R      K          W   + 
Sbjct: 1441 SLSWILAWFEAASGLSNKPSQKAPWASIPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRM 1500

Query: 422  LPINYLGVPLGVITTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQ 481
                +L +   V+ T K K GLGI ++      LL KW+  F +E+  LWK +I  KY Q
Sbjct: 1501 ERKIHL-INWEVVCTQKVKGGLGIRKIDLLNKALLSKWIWRFAFEEGTLWKKVIGVKYGQ 1560

Query: 482  SFVGEIPMKGKYCSLKAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCR 541
              +G    + +       W  I+K  +W   +I +K+ +G  ++F    W  +  L    
Sbjct: 1561 EGLGWRTNEARGAFGVXVWKEILKEANWCWDNIRFKVGKGTRVNFWTDHWCGDEALSRIF 1620

Query: 542  PRLFALSTKQNGTIKDLWNPNTLE--WDINLIRNLRDQELQQWEKLRTTLPVPEHNHGTN 550
            P+LFAL+  +N TI ++W+ +  +  W++   R+  D EL   E L   L   + +   +
Sbjct: 1621 PQLFALAVHKNATISEVWDSSLGQGGWNLRFARDSNDWELVVIEALFNMLRDFKLSQEED 1680

[Close]

BLAST of CSPI04G09230 vs. TrEMBL
Match: A5AXD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035958 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.7e-59
Identity = 164/607 (27.02%), Postives = 265/607 (43.66%), Query Frame = 1


Query: 2    WVKKCKRLWNIEGDENTAFFHKICSARKRSIITSIVDNNGVLCTNNNDIIKAFPRHFENI 61
            W +  + LW  EGD NT FFH++ +A +R      +  NGV  T   ++ +     ++ +
Sbjct: 592  WRQLSRELWLREGDRNTGFFHRMANAHRRVNALDKIKINGVRLTEEQEVREGIANAYQQL 651

Query: 62   YRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLFK 121
              ++      I  L    I     E L  PF + EI  +L   + +K P PNGF +  ++
Sbjct: 652  LSESSGWKADIGGLLLKQISHSEAEPLELPFSDVEIHAALMGMNGDKAPGPNGFMVAFWQ 711

Query: 122  SSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLM 181
            S W+ +K  +L++F +FH+ +   K +N+T++ L+ K        D+RPIS    LY L+
Sbjct: 712  SCWETVKEDVLDMFKEFHEQNSFIKSLNHTFLVLLPKKGGAEDMDDYRPISLLGGLYTLL 771

Query: 182  T--------------------------KITDAILITNEAVDYWKTKKVKGYIIKFDIEKA 241
                                       +I DA LI NE +D W+ +  KG I K DIEKA
Sbjct: 772  AKVLANRLKKVIGKVVFSYQNAFIKERRILDASLIANEVIDSWQKRGEKGLICKLDIEKA 831

Query: 242  FHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPLS 301
            +  +N   L                              N  P G    ++G+RQGDPLS
Sbjct: 832  YDSINWQFLLKVMQKMGFGPKWLGWMWSCISTAKFLVLVNGXPAGFFSSSKGLRQGDPLS 891

Query: 302  PFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ----NVTHLLFANDILLFIKDHDESID 361
            P+LF++ M+ LS  ++   E   + G      +    N++HLLFA+D ++F +   E + 
Sbjct: 892  PYLFVMGMEVLSVLITRAVEGXFISGCSIXRGRGQAINISHLLFADDTIVFCEAKKEFLT 951

Query: 362  NMRFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVI 421
             + + +  FE  S L +N+ +  +  +  D           W  +      +L V    +
Sbjct: 952  YLSWILFWFEAASXLKINLGQKRLEKLQRDF---------LWGGANGGKKAHL-VKWEXV 1011

Query: 422  TTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPMKGKYC 481
               KEK GLG+ +       LL KW+  F   K  LWK ++ AKY Q   G    K    
Sbjct: 1012 CADKEKGGLGLRKFACLNKALLGKWIWRFARAKEDLWKKVLEAKYGQEDFGWRTRKANGV 1071

Query: 482  SLKAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCRPRLFALSTKQNGT 541
                 W  I+K   W   ++ +K+ +G  + F    W  N+ L    P LF+++ ++N T
Sbjct: 1072 FGVGVWKXILKESAWCWENMVFKVGKGNKIRFWTDPWCGNNVLSQSFPNLFSMAAQRNVT 1131

Query: 542  IKDLWNPNTLE--WDINLIRNLRDQELQQWEKLRTTLPVPEHNHGTNIPIWKLNSNGIFS 547
            +++ W+ N  +  W++  +R   D EL     L   L         +  IWK   +G+F 
Sbjct: 1132 VEETWDQNFGQGGWNLRFLRAFNDWELDMVGNLLVELREYRVTLEEHSVIWKEGGDGLF- 1185

[Close]

BLAST of CSPI04G09230 vs. TAIR10
Match: ATMG01250.1 (ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase))

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-12
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1


Query: 224 LNSCPKGEIQPTRGIRQGDPLSPFLFILDMDYLSRFLSHLEEMGKLKGVRF-NDDQNVTH 283
           +N  P+G + P+RG+RQGDPLSP+LFIL  + LS      +E G+L G+R  N+   + H
Sbjct: 14  INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINH 73

Query: 284 LLFAND 289
           LLFA+D
Sbjct: 74  LLFADD 79

[Close]

BLAST of CSPI04G09230 vs. NCBI nr
Match: gi|659068893|ref|XP_008446987.1| (PREDICTED: uncharacterized protein LOC103489530 [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 1.8e-88
Identity = 190/464 (40.95%), Postives = 257/464 (55.39%), Query Frame = 1


Query: 137 DFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLMTK------------- 196
           DF+   +INK +N TYIALI K    S   DFRPIS TT++YK++ K             
Sbjct: 10  DFYDKGVINKNMNNTYIALISKKKDYSHPKDFRPISLTTSIYKIIAKTLSNRLKTTLPDT 69

Query: 197 -------------ITDAILITNEAVDYWKTKKVKGYIIKFDIEKAFHKLNGSSL------ 256
                        ITDAIL+ NEAVDYWK KK+KG+I+K DIEKAF  LN   +      
Sbjct: 70  ISGKQLAFVKNRQITDAILMANEAVDYWKVKKIKGFILKLDIEKAFDNLNWDFIDFVLEK 129

Query: 257 ------------------------NSCPKGEIQPTRGIRQGDPLSPFLFILDMDYLSRFL 316
                                   N  P+G I+  RG+RQGDPLSPFLF++ MDYLSR L
Sbjct: 130 KNFPNLWRKWIKGCISNVTYSVIVNGRPQGRIKANRGLRQGDPLSPFLFVIAMDYLSRLL 189

Query: 317 SHLEEMGKLKGVRFNDDQNVTHLLFANDILLFIKDHDESIDNMRFDIHLFELVSGLNVNM 376
           SHLE  G +KGV  N + N++H+LFA DILLFI+D+D  ++N+R  + LFE  SGL +N+
Sbjct: 190 SHLESSGAIKGVSLNSNCNISHILFAYDILLFIEDNDCFLNNLRMALSLFERASGLKINL 249

Query: 377 NKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVITTSKEKDGLGINRVIDTVF 436
            KS +  +NV  +R    A+ W         +YL +    +  SKE+ GLGI+R+  T  
Sbjct: 250 LKSALVPVNVSLNRAKECASFWGNNGS--EGSYL-INWTKVFKSKEEGGLGISRLHVTNK 309

Query: 437 FLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPMKGKYCSLKAPWLSIIKGVDWFISH 496
            LL KWL  +  E + LW+ +I  KY  ++ G+IP      + KAPW SII  +DWF S+
Sbjct: 310 ALLSKWLWCYLSEPNALWRRLIQCKYKGNYPGDIPSNISSSTSKAPWRSIIDNIDWFKSN 369

Query: 497 IHWKINEGASLSFRKTLWHENSPLHLCRPRLFALSTKQNGTIKDLWNPNTLEWDINLIRN 545
             W++N G  +SF  + W +   L    PRLFAL+  +  ++KD WN    +W+I   R 
Sbjct: 370 QSWELNNGDQISFWYSNWSQEGHLSTAYPRLFALTLGKEISVKDAWNTFDNQWNIIFRRE 429

[Close]

BLAST of CSPI04G09230 vs. NCBI nr
Match: gi|147807415|emb|CAN70755.1| (hypothetical protein VITISV_014700 [Vitis vinifera])

HSP 1 Score: 251.1 bits (640), Expect = 4.5e-63
Identity = 169/579 (29.19%), Postives = 264/579 (45.60%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARK-RSIITSIVDNNGVLCTNNNDIIKAFPRHFEN 61
           W +K K  W  +GD N+  FHK+ + R+ R+ I  + +  G++  N+  I +    +F+ 
Sbjct: 71  WRQKVKVKWVKDGDCNSKLFHKVANGRRNRNFIKFLENERGLVLDNSESITEEILLYFKK 130

Query: 62  IYRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLF 121
           +Y     E W +E + WSPI   +   L  PF E+EIF  +     +K P P+GFTI +F
Sbjct: 131 LYSSPLGESWRVEGIDWSPISKESASRLDSPFAEEEIFNVIFQLDRDKAPGPDGFTIAVF 190

Query: 122 KSSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKL 181
           +  W  IK  ++ VF +FH + IIN+  N ++I  + K  +    +DFRPIS  T LYK+
Sbjct: 191 QDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIVFLPKKSQSKKISDFRPISPITCLYKV 250

Query: 182 MTK--------------------------ITDAILITNEAVDYWKTKKVKGYIIKFDIEK 241
           + K                          I DA+LI NE VD  +    +G + K D EK
Sbjct: 251 IAKVLSGRLRGVLHETIHSTQGAFVQGRQILDAVLIANEIVDEKRRSGEEGVVFKIDFEK 310

Query: 242 AFHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPL 301
           A+  +    L                              N   KG ++ +RG+RQGDPL
Sbjct: 311 AYDHVKWDFLDHVLEKKGFSSKWRSWMRGCLSSVSYAILVNGNAKGWVKASRGLRQGDPL 370

Query: 302 SPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ-NVTHLLFANDILLFIKDHDESIDNM 361
           S FLF +  D L R L   EE   L+G R   ++  V+HL FA+D +LF    +E +  +
Sbjct: 371 SHFLFTIVADVLXRMLLKAEERSLLEGFRVGKNRCRVSHLQFADDTILFANSREEELQTL 430

Query: 362 RFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVI-- 421
           +  + +F  +SGL VN++KS +  IN+D +  +              +  LG    +I  
Sbjct: 431 KSLLLVFGQMSGLKVNLDKSNLFGINLDQNHLSSGCKSREDAKGLSLVQGLGKAKEIILL 490

Query: 422 -----TTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPM 481
                   + K GLGI ++      LL KWL  F  E + LW  +IL+ Y     G    
Sbjct: 491 RWDAVCKPRVKVGLGIGKIPLRNRALLGKWLWRFPRESTTLWHQVILSIYGTHSNGWDAN 550

Query: 482 KGKYCSLKAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCRPRLFALST 513
                S + PW +I +    F  +  + + +G  + F + LW E+       PRL+ +  
Sbjct: 551 TVVRWSHRCPWKAIAQVFQDFSKYTRFXVGDGERIRFWEDLWWEDQIFKDQYPRLYQVVM 610

[Close]

BLAST of CSPI04G09230 vs. NCBI nr
Match: gi|147780543|emb|CAN69124.1| (hypothetical protein VITISV_026287 [Vitis vinifera])

HSP 1 Score: 248.4 bits (633), Expect = 2.9e-62
Identity = 181/601 (30.12%), Postives = 264/601 (43.93%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARKRSIITSIVDNNGVLCTNNNDIIKAFPRHFENI 61
           W +K + +W  EGD+NT +FHK+ +AR R                         ++F + 
Sbjct: 310 WRQKSREIWLKEGDKNTKYFHKMANARAR-------------------------KNFLSK 369

Query: 62  YRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLFK 121
            R N++    I  L++  +       L   F E+EIF +L     NK P P+GFT+  + 
Sbjct: 370 IRINERPK--INGLNFKELGEGLANSLEVVFSEEEIFAALSSCCGNKAPSPDGFTMAFWL 429

Query: 122 SSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLM 181
             W  +K +ILE+F +FH +    + +N T++ LI K +      DFRPIS   ++YKL+
Sbjct: 430 FCWDVVKSEILELFREFHLHGTFQRSLNSTFLLLIPKKEGAEDLRDFRPISLVGSVYKLL 489

Query: 182 TKIT--------------------------DAILITNEAVDYWKTKKVKGYIIKFDIEKA 241
            K+                           DA+LI NEA+D      V G ++K DIEKA
Sbjct: 490 AKVVTNRLKSVMGEVISDSQQAFVHGRQILDAVLIANEALDSRLKDNVXGLLLKLDIEKA 549

Query: 242 FHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPLS 301
           F  +N + L                              N CP G  + +RG+RQGDPLS
Sbjct: 550 FDHVNWNXLIDVMSRMGFGHKWINWMKWCWSTATFSILINGCPTGFFRSSRGLRQGDPLS 609

Query: 302 PFLFILDMDYLSRFLSHLEEMGKLKGV----RFNDDQNVTHLLFANDILLFIKDHDESID 361
           P+LF+  M+ LS+ LS     G   G     R  +   V+H+LFA+D L+F       + 
Sbjct: 610 PYLFLFAMEALSQLLSRARNEGFFSGFKVGGRGREGLIVSHJLFADDTLIFCDADAVQLQ 669

Query: 362 NMRFDIHLFELVSGLNVNMNK----------SMISLINVDSHRTNCVATKWWLTSQFLPI 421
            + +    FE +SGL VN++K           M SL+++   +  C           LP 
Sbjct: 670 YLSWTFMWFEAISGLKVNLSKFEAIPVGECPPMESLVSILGCKIGC-----------LPT 729

Query: 422 NYLGVPLG-------VITTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILA 481
           +YLG+PLG       VI  +K+  GLGI  +      LL KWL  F  E   LWK II +
Sbjct: 730 SYLGLPLGAPYKSTSVICAAKKDGGLGIRNLAIFNKALLGKWLWRFANENESLWKQIISS 789

Query: 482 KYDQSFVGEIPMKGKYCSL-------KAPWLSIIKGVDWFISHIHWKINEGASLSFRKTL 517
           KYD          G +CS           W +I  G + F SH  + + +G  + F K L
Sbjct: 790 KYDL-------QDGGWCSKGVRDRYGVGVWKAIRNGWENFRSHSRFLVGDGTRVKFWKDL 849

[Close]

BLAST of CSPI04G09230 vs. NCBI nr
Match: gi|147810394|emb|CAN59965.1| (hypothetical protein VITISV_022758 [Vitis vinifera])

HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 169/606 (27.89%), Postives = 272/606 (44.88%), Query Frame = 1


Query: 2   WVKKCKRLWNIEGDENTAFFHKICSARK-RSIITSIVDNNGVLCTNNNDIIKAFPRHFEN 61
           W +K K  W  +GD N+  FHK+ + R+ R+ I  + +  G++  N+  I +    +F+ 
Sbjct: 186 WRQKAKVKWVKDGDCNSKLFHKVANERRNRNFIKLLENERGLVLDNSESITEEILLYFKK 245

Query: 62  IYRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLF 121
           +Y     E W +E + WSPI       L  PF E EI+ ++     +K P P+GFTI +F
Sbjct: 246 LYSSPPGESWSVEGIDWSPISEERASRLDSPFSEVEIYNAIFQLDRDKAPGPDGFTIAVF 305

Query: 122 KSSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKL 181
           +  W  IK  ++ VF +FH + IIN+  N ++I L+ K  +    +DFRPIS  T LYK+
Sbjct: 306 QDCWDVIKDDLVRVFAEFHNSGIINQNTNASFIVLLPKKSQSKKISDFRPISLITCLYKV 365

Query: 182 MTK--------------------------ITDAILITNEAVDYWKTKKVKGYIIKFDIEK 241
           +TK                          I DA+LI NE VD  +    +G + K D EK
Sbjct: 366 ITKFLSGRLRGVLQETIHSTQGAFVKGRQILDAVLIANEIVDEKRQSGEEGVVFKIDFEK 425

Query: 242 AFHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPL 301
           A+  +    L                              N   KG ++ +RG+RQGDPL
Sbjct: 426 AYDHVKWDFLDHVLEKKGFSPKWRKWMRGCLSSVSYAILVNDNAKGWVKASRGLRQGDPL 485

Query: 302 SPFLFILDMDYLSRFLSHLEEMGKLKGVRFNDDQ-NVTHLLFANDILLFIKDHDESIDNM 361
           SPFLF +  D LSR L   EE   L+G R   ++  V+HL FA+D + F    +E +  +
Sbjct: 486 SPFLFTIVADVLSRMLLKAEERSLLEGFRVGRNRCRVSHLQFADDTIFFANSSEEELQTL 545

Query: 362 RFDIHLFELVSGLNVNMNKSMISLINVDSHRTNCVATKWWLTSQFLPINYLGVPLGVITT 421
           +  + +F  VSGL VN++KS +  IN+D    +     W    +    ++ G  LG    
Sbjct: 546 KSLLLVFGQVSGLKVNLDKSNLFGINLDQDHLSRFLLXWLQKLRGCKXSFFGQGLG---- 605

Query: 422 SKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQSFVGEIPMKGKYCSL 481
            K K+ + ++ ++  +  +      G H   S  W    L ++               S 
Sbjct: 606 -KAKETILLDGMLCVILXIY-----GTH---SNGWDANTLVRW---------------SH 665

Query: 482 KAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCRPRLFALSTKQNGTIK 541
           + PW +I +    F  +    +  G  + F + LW  +       PRLF +   ++  I 
Sbjct: 666 RCPWKAIAQVFQDFSKYTRLVVGNGERIRFWEDLWWGDQIFKDQYPRLFRVVMDKSVPIY 725

Query: 542 D-LWNPNTLEWDINLIRNLRDQELQQWEKLRTTLPVPE-HNHGTNIPIWKLNSNGIFSIA 548
             L +     W+ N  R+L D E++  E+L  ++         ++   W L S+G+F++ 
Sbjct: 726 SILGSDRPFSWNFNFRRSLTDYEIKDLERLMRSIDCMNLFTSASDARSWSLLSSGLFTVK 763

[Close]

BLAST of CSPI04G09230 vs. NCBI nr
Match: gi|147854417|emb|CAN78583.1| (hypothetical protein VITISV_029931 [Vitis vinifera])

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 169/623 (27.13%), Postives = 280/623 (44.94%), Query Frame = 1


Query: 2    WVKKCKRLWNIEGDENTAFFHKICSARKRSIITSIVDNNGVLCTNNNDIIKAFPRHFENI 61
            W +  + LW  EGD+N+ FFH++ +A +R+     +  NGV  T   ++ +   ++F+ +
Sbjct: 1081 WRQMSRELWLKEGDKNSGFFHRMANAHRRTNSMDRIKINGVWRTEEQEVREGIVQNFQQL 1140

Query: 62   YRDNDKELWLIENLHWSPIFSMTQEELCKPFIEQEIFLSLKWFSNNKTPRPNGFTIKLFK 121
              +       IE LH   + +   E L  PF  +EI  +L   + +K P P+GFT   ++
Sbjct: 1141 LTEEPSWRADIEGLHLPRLNTCEAEGLEVPFTMEEIHSALMDMNGDKAPGPDGFTGAFWQ 1200

Query: 122  SSWKFIKRQILEVFTDFHKNDIINKVVNYTYIALIDKNDKCSLTTDFRPISFTTTLYKLM 181
            + W+F+K +I+++F +F       K +N T++ LI K        +FRPIS    LYKL+
Sbjct: 1201 TCWEFVKEEIMDLFKEFFVQKSFAKSLNTTFLVLIPKKGGAEDLGEFRPISLLGGLYKLV 1260

Query: 182  T--------------------------KITDAILITNEAVDYWKTKKVKGYIIKFDIEKA 241
                                       +I DA LI NE VD+W  +K KG I K DIEKA
Sbjct: 1261 AKVLANRLKKVLGKVVSMDQNAFVRGRQILDASLIANEVVDFWYKRKEKGLICKLDIEKA 1320

Query: 242  FHKLNGSSL------------------------------NSCPKGEIQPTRGIRQGDPLS 301
            +  +N + L                              N  P G    ++G+RQGDPLS
Sbjct: 1321 YDSINWNFLMKVLQKMGFGSRWMEWIWWCISTAKFSILVNGVPAGFFPSSKGLRQGDPLS 1380

Query: 302  PFLFILDMDYLSRFLSHLEEMGKLKGVRFNDD----QNVTHLLFANDILLFIKDHDESID 361
            P+LF++ M+ LS  +      G + G            V+HLLFA+D ++F +   E + 
Sbjct: 1381 PYLFVMGMEVLSALIRRAVGGGFVSGCSLKGRGGLVMEVSHLLFADDTIIFCEAKKEYLT 1440

Query: 362  NMRFDIHLFELVSGLNVNMNK----SMISLINVDSHRTNCVATK---------WWLTSQF 421
            ++ + +  FE  SGL+   ++    + I +  +   R      K          W   + 
Sbjct: 1441 SLSWILAWFEAASGLSNKPSQKAPWASIPIYQLSLFRMPKSVAKRLEKLQRDFLWGGGRM 1500

Query: 422  LPINYLGVPLGVITTSKEKDGLGINRVIDTVFFLLCKWLCGFHYEKSPLWKCIILAKYDQ 481
                +L +   V+ T K K GLGI ++      LL KW+  F +E+  LWK +I  KY Q
Sbjct: 1501 ERKIHL-INWEVVCTQKVKGGLGIRKIDLLNKALLSKWIWRFAFEEGTLWKKVIGVKYGQ 1560

Query: 482  SFVGEIPMKGKYCSLKAPWLSIIKGVDWFISHIHWKINEGASLSFRKTLWHENSPLHLCR 541
              +G    + +       W  I+K  +W   +I +K+ +G  ++F    W  +  L    
Sbjct: 1561 EGLGWRTNEARGAFGVXVWKEILKEANWCWDNIRFKVGKGTRVNFWTDHWCGDEALSRIF 1620

Query: 542  PRLFALSTKQNGTIKDLWNPNTLE--WDINLIRNLRDQELQQWEKLRTTLPVPEHNHGTN 550
            P+LFAL+  +N TI ++W+ +  +  W++   R+  D EL   E L   L   + +   +
Sbjct: 1621 PQLFALAVHKNATISEVWDSSLGQGGWNLRFARDSNDWELVVIEALFNMLRDFKLSQEED 1680

The following BLAST results are available for this feature:

BLAST of CSPI04G09230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
M1250_ARATH	3.1e-11	48.48	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana GN=AtMg0...	[more]
LORF2_HUMAN	2.7e-07	30.71	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1	[more]
LORF2_MOUSE	1.7e-06	30.50	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2	[more]

BLAST of CSPI04G09230 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BZP6_VITVI	3.1e-63	29.19	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014700 PE=4 SV=1	[more]
A5AK13_VITVI	5.9e-62	30.12	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026287 PE=4 SV=1	[more]
A5B7Z9_VITVI	8.5e-61	27.89	Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_022758 P...	[more]
A5B2E0_VITVI	1.1e-60	27.13	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029931 PE=4 SV=1	[more]
A5AXD8_VITVI	2.7e-59	27.02	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035958 PE=4 SV=1	[more]

BLAST of CSPI04G09230 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG01250.1	1.7e-12	48.48	ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)	[more]

BLAST of CSPI04G09230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659068893\|ref\|XP_008446987.1\|	1.8e-88	40.95	PREDICTED: uncharacterized protein LOC103489530 [Cucumis melo]	[more]
gi\|147807415\|emb\|CAN70755.1\|	4.5e-63	29.19	hypothetical protein VITISV_014700 [Vitis vinifera]	[more]
gi\|147780543\|emb\|CAN69124.1\|	2.9e-62	30.12	hypothetical protein VITISV_026287 [Vitis vinifera]	[more]
gi\|147810394\|emb\|CAN59965.1\|	1.2e-60	27.89	hypothetical protein VITISV_022758 [Vitis vinifera]	[more]
gi\|147854417\|emb\|CAN78583.1\|	1.6e-60	27.13	hypothetical protein VITISV_029931 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G09230.1	CSPI04G09230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 156..358 score: 1.4
IPR000477	Reverse transcriptase domain	PROFILE	PS50878	RT_POL	coord: 137..358 score: 10
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 13..358 score: 2.3
None	No IPR available	PANTHER	PTHR19446:SF368	SUBFAMILY NOT NAMED	coord: 13..358 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G09230	Cucurbita moschata (Rifu)	cmocpiB333
CSPI04G09230	Cucurbita moschata (Rifu)	cmocpiB710
CSPI04G09230	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G09230	Melon (DHL92) v3.5.1	cpimeB315
CSPI04G09230	Watermelon (Charleston Gray)	cpiwcgB281
CSPI04G09230	Watermelon (97103) v1	cpiwmB294
CSPI04G09230	Watermelon (97103) v1	cpiwmB297
CSPI04G09230	Cucurbita pepo (Zucchini)	cpecpiB224
CSPI04G09230	Cucurbita pepo (Zucchini)	cpecpiB400
CSPI04G09230	Bottle gourd (USVL1VR-Ls)	cpilsiB275
CSPI04G09230	Melon (DHL92) v3.6.1	cpimedB307
CSPI04G09230	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G09230	Silver-seed gourd	carcpiB0409
CSPI04G09230	Silver-seed gourd	carcpiB0907
CSPI04G09230	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G09230	Watermelon (97103) v2	cpiwmbB279
CSPI04G09230	Wax gourd	cpiwgoB360
CSPI04G09230	Cucumber (Gy14) v1	cgycpiB585
CSPI04G09230	Cucurbita maxima (Rimu)	cmacpiB339
CSPI04G09230	Cucurbita maxima (Rimu)	cmacpiB718