CSPI04G06290 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G06290
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Peptidase inhibitor I9
Location	Chr4 : 4338926 .. 4339764 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAGAACAGATACAATGGTGCACATGAACTGGGTGGCAGTGTCGGTGGCAGAGGCGAGGAATGTTACTTCGTTTTCATGAAGTATGATCCTGAATATGAACGTCTTCGGGCTGATCGGTTAGTAAAAGTTGTCAATATAAACATTTTTTTTCTTTTTCTTCTTTTAATATGTTTTCTTTTTTAATTTGATCTTTTTGGTATGAAGATGTGGGGAAGGGGCAGATGAGCTTGATGGGTACCTGAGTAGAAAGCACGATGAGGTTCTGAGGAGGTGGTTGGAGCCTGGCAGTTACAGAAAAATTTCATCCTTTCTCATCGTTGACGGGTTTTCAGTCGAGATTAACGAACATCAGGTATTTCAAGTTTCGTTAAATAATGAGTTTTAAGAGAACATTCATAGAAGATTGTCAAGACTTCTATGTTCTTAGAAGTATATGCTTTTTGAAAAAAAAAATTAGAGACTAAAAGAAATGGTAAATTTAAGAAACAATTACTTGGTATTTCTTTCTTCTTTTTCTGGTTTGTTATTAAAAGAAAAAAAAAATTAACTTCAGCTTTCTTTTCCCACATAAAGAGTTTAATTTATAAAAAGAAGCCTTTAAAAATGATTAAAAGTAATAAACTTTTATTTGATATATTCACTTTGCTTTATTTGAAAATGTCCATCCATCTATTGTTTTTTTTTTTTTTTTTTAAATTTTTGAAGAAAAGAAAATGAGTTTGGTTTTGATGATTTAAATACAGGCAAATGTGCTTAGATATGCAGAGGGAGTAAGGGTGGTGGAGAAGAATCAAGACCAACCTCTCATTATCAATCCAACAACAACTGATTAA

mRNA sequence

ATGCAGGAGAACAGATACAATGGTGCACATGAACTGGGTGGCAGTGTCGGTGGCAGAGGCGAGGAATGTTACTTCGTTTTCATGAAGTATGATCCTGAATATGAACGTCTTCGGGCTGATCGATGTGGGGAAGGGGCAGATGAGCTTGATGGGTACCTGAGTAGAAAGCACGATGAGGTTCTGAGGAGGTGGTTGGAGCCTGGCAGTTACAGAAAAATTTCATCCTTTCTCATCGTTGACGGGTTTTCAGTCGAGATTAACGAACATCAGGCAAATGTGCTTAGATATGCAGAGGGAGTAAGGGTGGTGGAGAAGAATCAAGACCAACCTCTCATTATCAATCCAACAACAACTGATTAA

Coding sequence (CDS)

ATGCAGGAGAACAGATACAATGGTGCACATGAACTGGGTGGCAGTGTCGGTGGCAGAGGCGAGGAATGTTACTTCGTTTTCATGAAGTATGATCCTGAATATGAACGTCTTCGGGCTGATCGATGTGGGGAAGGGGCAGATGAGCTTGATGGGTACCTGAGTAGAAAGCACGATGAGGTTCTGAGGAGGTGGTTGGAGCCTGGCAGTTACAGAAAAATTTCATCCTTTCTCATCGTTGACGGGTTTTCAGTCGAGATTAACGAACATCAGGCAAATGTGCTTAGATATGCAGAGGGAGTAAGGGTGGTGGAGAAGAATCAAGACCAACCTCTCATTATCAATCCAACAACAACTGATTAA

Homology

[Close]

BLAST of CSPI04G06290 vs. Swiss-Prot
Match: SBT25_ARATH (Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana GN=SBT2.5 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1


Query: 52  YLSRKHDEVLRRWLEPGSYRKISSFL-IVDGFSVEINEHQANVLRYAEGVRVVEKN 107
           +L RKHD +L    E GSY+K+ S+  +++GF+  ++  QA  LR A GVR V+K+
Sbjct: 65  HLERKHDMILGMLFEEGSYKKLYSYKHLINGFAAHVSPEQAETLRRAPGVRSVDKD 120

[Close]

BLAST of CSPI04G06290 vs. TrEMBL
Match: A0A0A0KZT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051480 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 6.4e-43
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 1  MQENRYNGAHELGGSVGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60
          MQENRYNGAHEL    GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV
Sbjct: 1  MQENRYNGAHEL----GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60

Query: 61 LRRWLEPGSYRKISSFLIVDGFSVEINEHQ 91
          LRRWLEPGSYRKISSFLIVDGFSVEINEHQ
Sbjct: 61 LRRWLEPGSYRKISSFLIVDGFSVEINEHQ 86

[Close]

BLAST of CSPI04G06290 vs. TrEMBL
Match: V4VIV8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024283mg PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G +  E YFVFM YDPEY+RLRADR  +GADELD YLS+KHDE+L   LEPGSYRK  S
Sbjct: 1   MGTQNAELYFVFMNYDPEYQRLRADRTKQGADELDLYLSKKHDELLASTLEPGSYRKTLS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQP 111
            +IVDGF+VEI E QANVLR A+GVRVVEKNQ+ P
Sbjct: 61  LVIVDGFAVEITEDQANVLRSAKGVRVVEKNQELP 95

[Close]

BLAST of CSPI04G06290 vs. TrEMBL
Match: A0A067GA69_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038903mg PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G +  E YFVFM YDPEY+RLRADR  +GADELD YLS+KHDE+L   LEPGSYRK  S
Sbjct: 1   MGTQNAELYFVFMNYDPEYQRLRADRTRQGADELDLYLSKKHDELLASTLEPGSYRKTLS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQP 111
            +IVDGF+VEI E QANVLR A+GVRVVEKNQ+ P
Sbjct: 61  LVIVDGFAVEITEDQANVLRSAKGVRVVEKNQELP 95

[Close]

BLAST of CSPI04G06290 vs. TrEMBL
Match: A5AEG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01300 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-28
Identity = 64/93 (68.82%), Postives = 75/93 (80.65%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G    E YFVFM +DPEYERLRADR   GA ELD YLSRKHD++L   LEPGSY+K SS
Sbjct: 1   MGSSNTELYFVFMNFDPEYERLRADRTKRGAHELDLYLSRKHDQLLASVLEPGSYKKTSS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQD 109
            +IVDGF+VEI++ QANVLR A+GVRVVEKNQ+
Sbjct: 61  LVIVDGFAVEISDDQANVLRSAKGVRVVEKNQE 93

[Close]

BLAST of CSPI04G06290 vs. TrEMBL
Match: A0A151SV98_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_014111 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-27
Identity = 64/92 (69.57%), Postives = 74/92 (80.43%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G    E YFVFM YDPEYERLRADR   G+ ELD YLSRKHDE+L   LEPGSY+K SS
Sbjct: 1   MGSTKIESYFVFMSYDPEYERLRADRSKRGSHELDLYLSRKHDELLASTLEPGSYKKTSS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQ 108
            +IVDGF+VEI++ QANVLR A+GVRVVEKN+
Sbjct: 61  LVIVDGFAVEISQDQANVLRSAKGVRVVEKNE 92

[Close]

BLAST of CSPI04G06290 vs. TAIR10
Match: AT2G19170.1 (AT2G19170.1 subtilisin-like serine protease 3)

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-07
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1


Query: 52  YLSRKHDEVLRRWLEPGSYRKISSFL-IVDGFSVEINEHQANVLRYAEGVRVVEKN 107
           +L RKHD +L    E GSY+K+ S+  +++GF+  ++  QA  LR A GVR V+K+
Sbjct: 65  HLERKHDMILGMLFEEGSYKKLYSYKHLINGFAAHVSPEQAETLRRAPGVRSVDKD 120

[Close]

BLAST of CSPI04G06290 vs. NCBI nr
Match: gi|778691034|ref|XP_011653213.1| (PREDICTED: uncharacterized protein LOC105435187 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.4e-60
Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 1


Query: 1   MQENRYNGAHELGGSVGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60
           MQENRYNGAHEL    GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV
Sbjct: 1   MQENRYNGAHEL----GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60

Query: 61  LRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQPLIINPTTTD 120
           LRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQPLIINPTTTD
Sbjct: 61  LRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQPLIINPTTTD 115

[Close]

BLAST of CSPI04G06290 vs. NCBI nr
Match: gi|659102066|ref|XP_008451935.1| (PREDICTED: uncharacterized protein LOC103493088 [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-58
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 1


Query: 1   MQENRYNGAHEL-GGSVGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDE 60
           MQENRYNGAHEL GG  GGRG ECYFVFMKYDPEYERLRADRCGEGADE+DGYLSRKHDE
Sbjct: 1   MQENRYNGAHELSGGGGGGRGGECYFVFMKYDPEYERLRADRCGEGADEVDGYLSRKHDE 60

Query: 61  VLRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQPLIINPTTTD 120
           VLRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLR A+GVRVVEKNQDQPLI+NPT+TD
Sbjct: 61  VLRRWLEPGSYRKISSFLIVDGFSVEINEHQANVLRSADGVRVVEKNQDQPLIVNPTSTD 120

[Close]

BLAST of CSPI04G06290 vs. NCBI nr
Match: gi|700198238|gb|KGN53396.1| (hypothetical protein Csa_4G051480 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 9.2e-43
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 1  MQENRYNGAHELGGSVGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60
          MQENRYNGAHEL    GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV
Sbjct: 1  MQENRYNGAHEL----GGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEV 60

Query: 61 LRRWLEPGSYRKISSFLIVDGFSVEINEHQ 91
          LRRWLEPGSYRKISSFLIVDGFSVEINEHQ
Sbjct: 61 LRRWLEPGSYRKISSFLIVDGFSVEINEHQ 86

[Close]

BLAST of CSPI04G06290 vs. NCBI nr
Match: gi|641857754|gb|KDO76499.1| (hypothetical protein CISIN_1g038903mg [Citrus sinensis])

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G +  E YFVFM YDPEY+RLRADR  +GADELD YLS+KHDE+L   LEPGSYRK  S
Sbjct: 1   MGTQNAELYFVFMNYDPEYQRLRADRTRQGADELDLYLSKKHDELLASTLEPGSYRKTLS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQP 111
            +IVDGF+VEI E QANVLR A+GVRVVEKNQ+ P
Sbjct: 61  LVIVDGFAVEITEDQANVLRSAKGVRVVEKNQELP 95

[Close]

BLAST of CSPI04G06290 vs. NCBI nr
Match: gi|567893762|ref|XP_006439369.1| (hypothetical protein CICLE_v10024283mg [Citrus clementina])

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-29
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 16  VGGRGEECYFVFMKYDPEYERLRADRCGEGADELDGYLSRKHDEVLRRWLEPGSYRKISS 75
           +G +  E YFVFM YDPEY+RLRADR  +GADELD YLS+KHDE+L   LEPGSYRK  S
Sbjct: 1   MGTQNAELYFVFMNYDPEYQRLRADRTKQGADELDLYLSKKHDELLASTLEPGSYRKTLS 60

Query: 76  FLIVDGFSVEINEHQANVLRYAEGVRVVEKNQDQP 111
            +IVDGF+VEI E QANVLR A+GVRVVEKNQ+ P
Sbjct: 61  LVIVDGFAVEITEDQANVLRSAKGVRVVEKNQELP 95

The following BLAST results are available for this feature:

BLAST of CSPI04G06290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SBT25_ARATH	9.0e-06	42.86	Subtilisin-like protease SBT2.5 OS=Arabidopsis thaliana GN=SBT2.5 PE=2 SV=1	[more]

BLAST of CSPI04G06290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZT9_CUCSA	6.4e-43	95.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051480 PE=4 SV=1	[more]
V4VIV8_9ROSI	1.1e-29	70.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024283mg PE=4 SV=1	[more]
A0A067GA69_CITSI	1.1e-29	70.53	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038903mg PE=4 SV=1	[more]
A5AEG2_VITVI	5.9e-28	68.82	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01300 PE=4 SV=...	[more]
A0A151SV98_CAJCA	1.7e-27	69.57	Uncharacterized protein OS=Cajanus cajan GN=KK1_014111 PE=4 SV=1	[more]

BLAST of CSPI04G06290 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19170.1	5.1e-07	42.86	subtilisin-like serine protease 3	[more]

BLAST of CSPI04G06290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691034\|ref\|XP_011653213.1\|	6.4e-60	96.64	PREDICTED: uncharacterized protein LOC105435187 [Cucumis sativus]	[more]
gi\|659102066\|ref\|XP_008451935.1\|	3.5e-58	92.50	PREDICTED: uncharacterized protein LOC103493088 [Cucumis melo]	[more]
gi\|700198238\|gb\|KGN53396.1\|	9.2e-43	95.56	hypothetical protein Csa_4G051480 [Cucumis sativus]	[more]
gi\|641857754\|gb\|KDO76499.1\|	1.5e-29	70.53	hypothetical protein CISIN_1g038903mg [Citrus sinensis]	[more]
gi\|567893762\|ref\|XP_006439369.1\|	1.5e-29	70.53	hypothetical protein CICLE_v10024283mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010259	S8pro/Inhibitor_I9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G06290.1	CSPI04G06290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010259	Peptidase S8 propeptide/proteinase inhibitor I9	PFAM	PF05922	Inhibitor_I9	coord: 52..107 score: 9.
None	No IPR available	PANTHER	PTHR37379	FAMILY NOT NAMED	coord: 17..110 score: 5.2
None	No IPR available	PANTHER	PTHR37379:SF1	SUBFAMILY NOT NAMED	coord: 17..110 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G06290	Cla010917	Watermelon (97103) v1	cpiwmB318
CSPI04G06290	Csa4G051480	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G06290	ClCG07G014960	Watermelon (Charleston Gray)	cpiwcgB338
CSPI04G06290	Lsi07G007110	Bottle gourd (USVL1VR-Ls)	cpilsiB304
CSPI04G06290	MELO3C032816.2	Melon (DHL92) v3.6.1	cpimedB288
CSPI04G06290	CsaV3_4G006490	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G06290	Cla97C07G141900	Watermelon (97103) v2	cpiwmbB328
CSPI04G06290	Bhi01G002288	Wax gourd	cpiwgoB367
CSPI04G06290	Cucsa.107330	Cucumber (Gy14) v1	cgycpiB130
CSPI04G06290	CmaCh16G005510	Cucurbita maxima (Rimu)	cmacpiB342
CSPI04G06290	CmoCh16G006020	Cucurbita moschata (Rifu)	cmocpiB332
CSPI04G06290	Cp4.1LG14g02540	Cucurbita pepo (Zucchini)	cpecpiB223
CSPI04G06290	CsGy4G006210	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G06290	Carg22244	Silver-seed gourd	carcpiB0623

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G06290	Silver-seed gourd	carcpiB0048
CSPI04G06290	Silver-seed gourd	carcpiB0394
CSPI04G06290	Cucumber (Chinese Long) v3	cpicucB210
CSPI04G06290	Cucumber (Chinese Long) v3	cpicucB236
CSPI04G06290	Watermelon (97103) v2	cpiwmbB276
CSPI04G06290	Watermelon (97103) v2	cpiwmbB321
CSPI04G06290	Wax gourd	cpiwgoB365
CSPI04G06290	Wild cucumber (PI 183967)	cpicpiB108
CSPI04G06290	Wild cucumber (PI 183967)	cpicpiB157
CSPI04G06290	Cucumber (Gy14) v1	cgycpiB385
CSPI04G06290	Cucumber (Gy14) v1	cgycpiB456
CSPI04G06290	Cucurbita maxima (Rimu)	cmacpiB295
CSPI04G06290	Cucurbita maxima (Rimu)	cmacpiB721
CSPI04G06290	Cucurbita moschata (Rifu)	cmocpiB285
CSPI04G06290	Cucurbita moschata (Rifu)	cmocpiB715
CSPI04G06290	Cucumber (Chinese Long) v2	cpicuB179
CSPI04G06290	Cucumber (Chinese Long) v2	cpicuB195
CSPI04G06290	Melon (DHL92) v3.5.1	cpimeB260
CSPI04G06290	Melon (DHL92) v3.5.1	cpimeB291
CSPI04G06290	Melon (DHL92) v3.5.1	cpimeB295
CSPI04G06290	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G06290	Watermelon (Charleston Gray)	cpiwcgB299
CSPI04G06290	Watermelon (Charleston Gray)	cpiwcgB331
CSPI04G06290	Watermelon (97103) v1	cpiwmB329
CSPI04G06290	Watermelon (97103) v1	cpiwmB334
CSPI04G06290	Cucurbita pepo (Zucchini)	cpecpiB175
CSPI04G06290	Cucurbita pepo (Zucchini)	cpecpiB405
CSPI04G06290	Bottle gourd (USVL1VR-Ls)	cpilsiB244
CSPI04G06290	Bottle gourd (USVL1VR-Ls)	cpilsiB298
CSPI04G06290	Melon (DHL92) v3.6.1	cpimedB256
CSPI04G06290	Melon (DHL92) v3.6.1	cpimedB285
CSPI04G06290	Cucumber (Gy14) v2	cgybcpiB125
CSPI04G06290	Cucumber (Gy14) v2	cgybcpiB224