CSPI04G05480 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTTCCTTTATAACAAATATATGGGTTATTGTCAAACACATATTCAATGAGTTTTGTAATTGCTAATCTCCTAAATAACCGTAATGCATATAAATTTGCAAAAAGAAAAGACTGAATGAGGAATGGGTAAACCTGATTTGGTGGAAATCGGACTACCAAGAACTAAAATTACCAAACTTGGAGAAAAGTGGATACGTGTCCTATTCAACGCAACCCTCGAAGATACGACTGAGGTAAATAACCGCCACGTTTGATACAAAACAAGCCACGTAACCGTCTCCCCTCGCCGGCTTCTCTCCCAAAAACCTCCCAACCCCACATTCAAATACCTAAACTTATAAACTCATAATTTCACTGCCCCAATCTCCATTCCCATTTCTTTTTTAATTTTTATATATAGTTTGTATTTTAGTTGGATCGGAGAAAAAAGAAGGAAGAAAATTAGAAATAATGGGGAGGAAAACAATGACGTTGTTGGTGGCGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGATAAATGCAGTGGGTTTGAAGAAGCAGTACAAGATATGAAGGACAATGTGAAGCAAATGGCGGAAGATGCAAAGCTTGATGAAAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGATGCTAAGGACAAGGCTTCCTCCTGGTCCAACTGGGCTTACGACAAGATTTCCGCGTAACACCTCTTTTTCTTTCTCTTTCTCTTTCTAATCTAATTACATTCTAATAGAACTAAATGAATTTAGTAATATTAGTTATCTCTGCCTCAAAATGATCCACCCAAACATCCTTTTTTAGATTATATTACATTACAAAATCAGAAAAATTAAGATCATTAGTTTTGTTGGCTTTGAATATGAATGGGTTAAATTTGAAACAGGGGATTGGGATTGAGCGAAGAATCGAAGGAGAAAGAGACAGCTCCTAACGCAGCAGATAAAAATTAACACAGCTGCTTCAGGTAAATTACGCATTATTGTTTTATCATTATCTCTAAATCAAAATGTTTGAAAAATTATATATAATATTTGAAAAATAATTCTACTTATTTTGGAAGAAATTGGGTTGGTAATATACATTTTTTAATGGCCAGAATTGTTTTGCCTGTTATAGTC ATGGGGAGGAAAACAATGACGTTGTTGGTGGCGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGATAAATGCAGTGGGTTTGAAGAAGCAGTACAAGATATGAAGGACAATGTGAAGCAAATGGCGGAAGATGCAAAGCTTGATGAAAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGATGCTAAGGACAAGGCTTCCTCCTGGTCCAACTGGGCTTACGACAAGATTTCCGCGGGATTGGGATTGAGCGAAGAATCGAAGGAGAAAGAGACAGCTCCTAACGCAGCAGATAAAAATTAA ATGGGGAGGAAAACAATGACGTTGTTGGTGGCGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGATAAATGCAGTGGGTTTGAAGAAGCAGTACAAGATATGAAGGACAATGTGAAGCAAATGGCGGAAGATGCAAAGCTTGATGAAAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGATGCTAAGGACAAGGCTTCCTCCTGGTCCAACTGGGCTTACGACAAGATTTCCGCGGGATTGGGATTGAGCGAAGAATCGAAGGAGAAAGAGACAGCTCCTAACGCAGCAGATAAAAATTAA
BLAST of CSPI04G05480 vs. TrEMBL
Match: A0A0A0KY19_CUCSA (Late embryogenesis abundant OS=Cucumis sativus GN=Csa_4G046700 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-46 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI04G05480 vs. TrEMBL
Match: A0A0A0KUJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046680 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-28 Identity = 77/103 (74.76%), Postives = 89/103 (86.41%), Query Frame = 1
BLAST of CSPI04G05480 vs. TrEMBL
Match: B9S6F3_RICCO (Late embryogenesis abundant, putative OS=Ricinus communis GN=RCOM_0536090 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.1e-06 Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 1
BLAST of CSPI04G05480 vs. NCBI nr
Match: gi|449457538|ref|XP_004146505.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-46 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI04G05480 vs. NCBI nr
Match: gi|659102352|ref|XP_008452083.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]) HSP 1 Score: 142.5 bits (358), Expect = 4.1e-31 Identity = 80/102 (78.43%), Postives = 90/102 (88.24%), Query Frame = 1
BLAST of CSPI04G05480 vs. NCBI nr
Match: gi|449457638|ref|XP_004146555.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28 Identity = 77/103 (74.76%), Postives = 89/103 (86.41%), Query Frame = 1
BLAST of CSPI04G05480 vs. NCBI nr
Match: gi|659102350|ref|XP_008452082.1| (PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]) HSP 1 Score: 125.2 bits (313), Expect = 6.8e-26 Identity = 75/103 (72.82%), Postives = 86/103 (83.50%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |