CSPI04G05160 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACTCAATTAATATATATCTATTATTTCATATCAACTTCTACTTCAAACGTAGTACCGATCATGTAAGTCCATGATACGTGTCTGTGCTGATAAAACACTTTTCTTCAACAATGTATTGATGTAATGTTACATCAATCAATTAACAGAATTATAATAATAATAACAATATTATTATTATTGAAATCAAAACTCCAATAATTGCAAATATTTCACAATTTTCAGGATGTGATGTTCGGTGGCACAGAGACAGTGGCCTCCGCCATAGAATGGACCATGGCTGAGCTCATGAAAAACCCCGACGACCTCGAAAAGCTTCAACAGCAACTCGACGACACCGTCGGCCTTCACCACCGTCCACAAGAATCCGACTTACACAATCTAACATACCTCAGATGCATTCTGAAAGAAACTCTCCGTCTCCACCCGCCGATTCCGGTGCTCCTCCACGAAACGGCAGCCGAAACCGAACTCGCCCGCTCTCGGATTCCTGCCAAGTCTCGTGTCTTCATCAACGCATGGGCGATCGGTCGGGACGAGAAGTCCCGGGTGGACCCCGATATTTTCCGGCCGGCGAGGTTTGAAATCGAAGGTGCGGCGGATTTTAAAGGTGGGGACTTCGAGTTTATTCCGTTCGGGTCAGGGCGGAGGTCTTGCCCTGGAATGTAGCTGGGGGTTTATGCGGTGGAGATGGCGGTGGCGAATTTAGGGTGATCAACATGTTAATAAATAAAACATTTTTTTTAAAGAAAACTAAAATTAAAGTTTATTCAAAATATATAAACGTTAGGATTAGACATTTAAATTACAAGAGAACCAAAACTTCAAAATTTAGAACCTAAATGATATTTTTTGACCAATATGTATTAATTATTGTTTGGT ATGTTCGGTGGCACAGAGACAGTGGCCTCCGCCATAGAATGGACCATGGCTGAGCTCATGAAAAACCCCGACGACCTCGAAAAGCTTCAACAGCAACTCGACGACACCGTCGGCCTTCACCACCGTCCACAAGAATCCGACTTACACAATCTAACATACCTCAGATGCATTCTGAAAGAAACTCTCCGTCTCCACCCGCCGATTCCGGTGCTCCTCCACGAAACGGCAGCCGAAACCGAACTCGCCCGCTCTCGGATTCCTGCCAAGTCTCGTGTCTTCATCAACGCATGGGCGATCGGTCGGGACGAGAAGTCCCGGGTGGACCCCGATATTTTCCGGCCGGCGAGGTTTGAAATCGAAGGTGCGGCGGATTTTAAAGGTGGGGACTTCGAGTTTATTCCGTTCGGGTCAGGGCGGAGGTCTTGCCCTGGAATGTAG ATGTTCGGTGGCACAGAGACAGTGGCCTCCGCCATAGAATGGACCATGGCTGAGCTCATGAAAAACCCCGACGACCTCGAAAAGCTTCAACAGCAACTCGACGACACCGTCGGCCTTCACCACCGTCCACAAGAATCCGACTTACACAATCTAACATACCTCAGATGCATTCTGAAAGAAACTCTCCGTCTCCACCCGCCGATTCCGGTGCTCCTCCACGAAACGGCAGCCGAAACCGAACTCGCCCGCTCTCGGATTCCTGCCAAGTCTCGTGTCTTCATCAACGCATGGGCGATCGGTCGGGACGAGAAGTCCCGGGTGGACCCCGATATTTTCCGGCCGGCGAGGTTTGAAATCGAAGGTGCGGCGGATTTTAAAGGTGGGGACTTCGAGTTTATTCCGTTCGGGTCAGGGCGGAGGTCTTGCCCTGGAATGTAG
BLAST of CSPI04G05160 vs. Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=1 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.3e-51 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 1
BLAST of CSPI04G05160 vs. Swiss-Prot
Match: C84A4_ARATH (Cytochrome P450 84A4 OS=Arabidopsis thaliana GN=CYP84A4 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.3e-42 Identity = 81/146 (55.48%), Postives = 108/146 (73.97%), Query Frame = 1
BLAST of CSPI04G05160 vs. Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=2) HSP 1 Score: 155.6 bits (392), Expect = 4.1e-37 Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 1
BLAST of CSPI04G05160 vs. Swiss-Prot
Match: C76B6_CATRO (Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34 Identity = 68/143 (47.55%), Postives = 96/143 (67.13%), Query Frame = 1
BLAST of CSPI04G05160 vs. Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.6e-34 Identity = 70/142 (49.30%), Postives = 96/142 (67.61%), Query Frame = 1
BLAST of CSPI04G05160 vs. TrEMBL
Match: Q6PLI4_CENER (Coniferylalcohol 5-hydroxylase OS=Centaurium erythraea PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-57 Identity = 109/145 (75.17%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CSPI04G05160 vs. TrEMBL
Match: A0A059ASK6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02371 PE=3 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 7.6e-54 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CSPI04G05160 vs. TrEMBL
Match: F6GWQ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02900 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 1
BLAST of CSPI04G05160 vs. TrEMBL
Match: A5AK80_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026695 PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.8e-53 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CSPI04G05160 vs. TrEMBL
Match: A0A088B182_9ROSI (Putative ferulate 5-hydroxylase OS=Hibiscus cannabinus GN=F5H PE=2 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 4.9e-53 Identity = 101/145 (69.66%), Postives = 123/145 (84.83%), Query Frame = 1
BLAST of CSPI04G05160 vs. TAIR10
Match: AT4G36220.1 (AT4G36220.1 ferulic acid 5-hydroxylase 1) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-52 Identity = 96/145 (66.21%), Postives = 116/145 (80.00%), Query Frame = 1
BLAST of CSPI04G05160 vs. TAIR10
Match: AT5G04330.1 (AT5G04330.1 Cytochrome P450 superfamily protein) HSP 1 Score: 172.6 bits (436), Expect = 1.8e-43 Identity = 81/146 (55.48%), Postives = 108/146 (73.97%), Query Frame = 1
BLAST of CSPI04G05160 vs. TAIR10
Match: AT3G52970.2 (AT3G52970.2 cytochrome P450, family 76, subfamily G, polypeptide 1) HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32 Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1
BLAST of CSPI04G05160 vs. TAIR10
Match: AT5G06900.1 (AT5G06900.1 cytochrome P450, family 93, subfamily D, polypeptide 1) HSP 1 Score: 135.2 bits (339), Expect = 3.3e-32 Identity = 66/142 (46.48%), Postives = 95/142 (66.90%), Query Frame = 1
BLAST of CSPI04G05160 vs. TAIR10
Match: AT4G22710.1 (AT4G22710.1 cytochrome P450, family 706, subfamily A, polypeptide 2) HSP 1 Score: 132.9 bits (333), Expect = 1.6e-31 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 1
BLAST of CSPI04G05160 vs. NCBI nr
Match: gi|659107516|ref|XP_008453715.1| (PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 84A1-like [Cucumis melo]) HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72 Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 1
BLAST of CSPI04G05160 vs. NCBI nr
Match: gi|46403211|gb|AAS92625.1| (coniferylalcohol 5-hydroxylase [Centaurium erythraea]) HSP 1 Score: 228.4 bits (581), Expect = 8.0e-57 Identity = 109/145 (75.17%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CSPI04G05160 vs. NCBI nr
Match: gi|702467402|ref|XP_010029715.1| (PREDICTED: cytochrome P450 84A1-like [Eucalyptus grandis]) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CSPI04G05160 vs. NCBI nr
Match: gi|225431217|ref|XP_002272644.1| (PREDICTED: cytochrome P450 84A1 [Vitis vinifera]) HSP 1 Score: 217.2 bits (552), Expect = 1.9e-53 Identity = 102/145 (70.34%), Postives = 122/145 (84.14%), Query Frame = 1
BLAST of CSPI04G05160 vs. NCBI nr
Match: gi|147787265|emb|CAN73481.1| (hypothetical protein VITISV_026695 [Vitis vinifera]) HSP 1 Score: 215.7 bits (548), Expect = 5.4e-53 Identity = 102/145 (70.34%), Postives = 121/145 (83.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |