CSPI04G02630 (gene) Wild cucumber (PI 183967)

NameCSPI04G02630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPeroxisomal membrane protein 13
LocationChr4 : 1601956 .. 1606012 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGGTTTTCAATAGATTGGATAAGGAATGTTTTCCTCATTGCCTAGTTGAATTGATAAAAATAAGAAAAAAATTGAAACTTTGAAATGATAAATTCATAATATATATTAAAGATTTGAAGCGGAATTGGGAGGATGAGACCGACTCTGATGCGGATTCATCTTGCCAACAAAATTTGCCCATAAGCTCACACTTTCCATTTTGTTTGTTTGTTCCGAACCCCTTGAGAGAGAGAGAAAGAGAGAGGGATTTTTTATCTCTCCCAATTTCTGATGCAATTTCTCATCGATTTCCATGGATTCTAAGCCTCCACAGCCTTCAGGTTTACCAAATTCATCCCTTTCTCTCACCCCTTCTTTTTATTTGAGGTCGGCTTGTGCTTATCGTTTACTCTTTTGTTTTTCGGTGATAAAACCCTAGTTTTGATTGTACTTCTATTGATTTTCTTCTCTTTTTTTTTTGTGGGTTTGTGTTTTTTCGTTAGTTAATCGGGTACCCTTTTGTTTTGGGTTTGTATTTCAATAGATGAATGTATTAGGTTTTGTTAGATTGTGTTTGTATGGAGTAAGTGTACCGTTGACTTTGTAAAAAGACGAGATTGGATGAAATATTGATGGGTTTCTAGCGTATATGTAGAAGCTCTATCCACTTGGGTTCAATATTCAGGATTATGATCTGAATCAATCGTGATTTATACCTTAGAGAAAGGGAGAAATTATTGTTGTCTCTAATTGCTGGCTGCTGTTTCACCCGTTGTTTGATTGCTTTTTAAAAGTCCTTTTTAATTTCACTTGTTGATTTGCGATTGCCTTACTTTTGGTTATTGCAGCTTCTAATCCTCCACCAAAACCTTGGGAAAGAGCAGGGGGATCATCGGGTTCAGCACCTTTTAGACCGCCATCGGCTGGCAATACAAGTGATGTTGTAGAGGCTTCTGGGACTGCAAAACCCGGAGAAATTGTTTCTAGTTCTGATAGGACTGCTGCTGTTAATAGGAACTCACTTGGCAGGCCTGTCCCAACAAGGCCTTGGGAGCAAAATTATGGGAATAACAGCTACGGAGGAGGAGGTTACAATTTAAATGTTTTGGCCTCTTTGCAACTGATGTATGCTTTTGCATTTGATATTCTTACTTTGACGCTGAGGTTATTTCTTGTTTTTCTTAATGCAGCTTATGGTTCAACTATGAACAATTCACTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGGGGAATGTATGGGGGTGGAATGTATGGGAACAGCAGCATGTATAGATCAGGAGGTTATGGTGGTGGGCTTTACGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCTTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGATCCTTATGGTCCTCCCTCATCTCCTCCGGGATTTTGGATGTCATTTCTGCGAGTGGTAAGCAATTTACTTATTTCTTTTACATTGCTATTGTTCTTTTATTTTTGGTTGGGGTGAATGGACAGGGTTTTCTTACCTTAACTTATCGCTATCTATTGTTCTGAGGTTTTATTACCTTAGTATGCTCGTTTTTGTCAAATTGACTTAGTATCTATTAAAGCCATAGATCGGTTCTTGTACACGGAATGCTGTTTTTCCAAGCACTAATTTCTTATATTGTGCTTTATTCTTTTGAAAGTGTTTATTTTTGTGTGCTTCCTTTAAAAGAAATTCAATGACTTCAAGATTGATTCAAGGTTGAGTTGATAATTTCTGGGTATCCTATGTCACCAACGAAGATTATGTGTATTTGTATTTGAAGTTAAAAAAATATGTTCTCATGTTCTGTAATCCACTGTGGACTGGGTTAGGAAAAACAAATATGATGTTTCTTATACGTATCTATCTATTTTGTGATTCTGATTGCAATTACCTGAGGTTCATGTTTCAACTCCTGAATCATCGCCTTCTTGTTTCTTTGCCAGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCCATTCTTATTGACCAAAACACACAGGCGTTTCATATGTTCATGACTGCACTACTTCAGGTATGCTTGTGCCCTTTTGACTTTCCAACTCCCTTACTTTATAAATGTTTCCTAGATTGTGCTGACTAAAAACACGAATGAATTTTCTTTTCCTTGGAGAAAGAATAGATCCTTTTTAAGATCCACCAATTTTAAACGTACAGACTATAAAAGCAACAGTAATGGTAGATGTTTCATTTTCTAAGTGGTGGCTTGAAAGTGAAAACGAGAATTTAAATCTTCATTAATGATAGTTGTTTAATTTTCAAAGTGGGCACGTGAAAGTTAAAATCGGAATTTATAACCAACTTTATTTATTTATTTTGAAAAAAACTCAAATTTCAACAGCTGTTACAGTTCCTTGTGTTGATTCACATAAAATACCTCTGGATATACAGTACTGAATTTTCCCTGGAGTATGTGATTGATCTTTTTCCCCCCTTCCCTTTCAAGATCCCAAACTAGAAGGCCTGAACAGAAGAGATATTTTGGCAGCCTACACCCTTTTTTGACGAGGAATCATTTTATTTTGGATGAAAAAAATGACTTTTCGCTTCATCAGTGAAAAAAGGCATGCCAGAAAGCCCCTTCAATCAGCCAAAATGTCAGTCTAAGCAATACAGATAGGACTCGACACTGTCATTTGCTAATTTTAAAAAAACCAGTAGATGAAAATGTTGTGAATACACTCATTTTTTTTTTTTTAACTTTTTAGGGATTTATATAAATATAACATAAAATACTAAATACTAAATATACTCCACCAAAAAGATCATAAAAGGTCAAATGATTAACGATTGTAGTAGATGAAACCTTTTTTTATATATATTTTTTTTGTTTTAACATATTATTAATTTGGGTTCAACGCAAAGGGACTCTCTGCAATTTTTTCCTAGATGTGTCCAGGAAGTGTTCCAACTGTGTCATGTGTCTAAAGTCAAAATAAGTAAATAAAAGTAGGACACAAAAAGTTGCGGGTTGGGGATATGTCTAGAGCTGTGTTTGATGCACACTCCACGCTTCATAGATCCAATAATACTATAGTTACAAAATGATTTACTAATTATACTCCAAGAAGCTGGAAACTGTAACAAGAAGTAACTAAGAGTTGTAATTGTGTTACAATTAGATAGCTGCTACCTTGAACCGTAGATGATATAGATAGATAAAAAAATTTCATAAATAAATGACGTCTATTCTCTATGTTCTGATGGATTCCTGTTACAGCTTTTTGATCGCTCCGGTATGTTGTATGGAGAGCTTGCTAGATTTGTCTTGAGGCTGCTCGGAATCAAAACCAAACCTAGGAAGGTCCTAGGCCCAGATGGGCTTCCAATTCCTGGAGCCCCCCATCCTCATCAAAGCCAGAACTTGATCGAAGGACCAAAACCTGCTCCTGATGGCGCTTGGGATAATGTTTGGCCAAATGGTTCCCAGTAAATGAACAAATTTAATTAACATTGAAGGTAAGGGAGCTTCATTTCTTCCTTCCTGGTATATATCTTCAAGAAATAACAATCTCTGCAGCTCATCATGTTCGATTCTTACATTGCAGTGTACTCAAAACAAGAAGCATACTGTAAGATCTCAATCAGACCGAACTGAGATGTGATCCCAAGCTTGTATTTAGCAGGATTGACCTCAGACTTGCCCGCAGTTCTGGTTTCTGAGAAGAACATAATTGAAATAGTGATTTAAGCTGTCTGTGACATGAAATGCGTAGTTGGTTTTACTGGTTCTTTGGGTGGTTCAGTTCAGTACTATTCTTTTTTTGTGGAGTATGATTGATGATAATAATGGAAAGAGATCGTATTCTAAGTCTCTTCCCCTGTTTTCCTGTCTCTCTCTCTCTATTCTTAATGACAAAAAGAAGTATAGTTCAAGTACAATCGAATGTGAACGTAATAAAATGAATGTTTTCCCCATTGATTGTTTGCTTCCATAGAATGTAATAAAAGATAGGTG

mRNA sequence

ATGGATTCTAAGCCTCCACAGCCTTCAGCTTCTAATCCTCCACCAAAACCTTGGGAAAGAGCAGGGGGATCATCGGGTTCAGCACCTTTTAGACCGCCATCGGCTGGCAATACAAGTGATGTTGTAGAGGCTTCTGGGACTGCAAAACCCGGAGAAATTGTTTCTAGTTCTGATAGGACTGCTGCTGTTAATAGGAACTCACTTGGCAGGCCTGTCCCAACAAGGCCTTGGGAGCAAAATTATGGGAATAACAGCTACGGAGGAGGAGCTTATGGTTCAACTATGAACAATTCACTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGGGGAATGTATGGGGGTGGAATGTATGGGAACAGCAGCATGTATAGATCAGGAGGTTATGGTGGTGGGCTTTACGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCTTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGATCCTTATGGTCCTCCCTCATCTCCTCCGGGATTTTGGATGTCATTTCTGCGAGTGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCCATTCTTATTGACCAAAACACACAGGCGTTTCATATGTTCATGACTGCACTACTTCAGCTTTTTGATCGCTCCGGTATGTTGTATGGAGAGCTTGCTAGATTTGTCTTGAGGCTGCTCGGAATCAAAACCAAACCTAGGAAGGTCCTAGGCCCAGATGGGCTTCCAATTCCTGGAGCCCCCCATCCTCATCAAAGCCAGAACTTGATCGAAGGACCAAAACCTGCTCCTGATGGCGCTTGGGATAATGTTTGGCCAAATGGTTCCCAGTAA

Coding sequence (CDS)

ATGGATTCTAAGCCTCCACAGCCTTCAGCTTCTAATCCTCCACCAAAACCTTGGGAAAGAGCAGGGGGATCATCGGGTTCAGCACCTTTTAGACCGCCATCGGCTGGCAATACAAGTGATGTTGTAGAGGCTTCTGGGACTGCAAAACCCGGAGAAATTGTTTCTAGTTCTGATAGGACTGCTGCTGTTAATAGGAACTCACTTGGCAGGCCTGTCCCAACAAGGCCTTGGGAGCAAAATTATGGGAATAACAGCTACGGAGGAGGAGCTTATGGTTCAACTATGAACAATTCACTTTACGGTTCTGGGATGTATGGTTCTTCTTCTTATGGTGGGGGAATGTATGGGGGTGGAATGTATGGGAACAGCAGCATGTATAGATCAGGAGGTTATGGTGGTGGGCTTTACGGATCTTCTGGTATGTATGGAAATAGTGGTATGTATGGAGGTGGAATGTATAATAGTGGCTTTGGAGGTCCAATGGGTGGCTATGGAATGGGCATGGGTGGTCCTTATGGTGGTCAAGATCCAAATGATCCTTATGGTCCTCCCTCATCTCCTCCGGGATTTTGGATGTCATTTCTGCGAGTGATGCATGGTGTTGTGAACTTCTTTGGTCGAATATCCATTCTTATTGACCAAAACACACAGGCGTTTCATATGTTCATGACTGCACTACTTCAGCTTTTTGATCGCTCCGGTATGTTGTATGGAGAGCTTGCTAGATTTGTCTTGAGGCTGCTCGGAATCAAAACCAAACCTAGGAAGGTCCTAGGCCCAGATGGGCTTCCAATTCCTGGAGCCCCCCATCCTCATCAAAGCCAGAACTTGATCGAAGGACCAAAACCTGCTCCTGATGGCGCTTGGGATAATGTTTGGCCAAATGGTTCCCAGTAA
BLAST of CSPI04G02630 vs. Swiss-Prot
Match: PEX13_ARATH (Peroxisomal membrane protein 13 OS=Arabidopsis thaliana GN=PEX13 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.8e-85
Identity = 193/303 (63.70%), Postives = 217/303 (71.62%), Query Frame = 1

Query: 10  ASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSS--SDRTAAVNRNS 69
           A   PPKPWE+ G +SG  PFRPPS  +T+  VEASGTA PGE+V    +    A N NS
Sbjct: 6   AGGSPPKPWEKEGNTSGPNPFRPPSNTSTAGSVEASGTANPGEVVPPPVNRPNTAANMNS 65

Query: 70  LGRPVPTRPWE-QNYGNNSYGGGAYGSTMN-NSLYGSGMYGSSSYG-GGMYGGGMYGNSS 129
           L RPVP RPWE QNYG+    GG YGS +   S YGSG YGS+  G G  YGGGMYG SS
Sbjct: 66  LSRPVPARPWEQQNYGSTM--GGGYGSNLGMTSGYGSGTYGSALGGYGSSYGGGMYGGSS 125

Query: 130 MYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPND 189
           MYR G  GGGLYGSSGMYG   M  YGG  G Y  G G  MG G GMGMGGPYG QDPND
Sbjct: 126 MYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMGMGMGMGMGGPYGSQDPND 185

Query: 190 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 249
           P+  P SPPGFW+SFLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLYGE
Sbjct: 186 PFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRGGMLYGE 245

Query: 250 LARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPDGAWDNV 296
           LARFVLR+LG++T+PRK+     GP+GLP+P    PH +QN +EGPK   P   G WDNV
Sbjct: 246 LARFVLRMLGVRTRPRKMQQPPQGPNGLPLP--HQPHGNQNYLEGPKTAAPGGGGGWDNV 304

BLAST of CSPI04G02630 vs. TrEMBL
Match: A0A0A0KYV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010950 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 3.7e-164
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120
           AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120

Query: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180
           GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP
Sbjct: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180

Query: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240
           YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL
Sbjct: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240

Query: 241 ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 299
           ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
Sbjct: 241 ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 298

BLAST of CSPI04G02630 vs. TrEMBL
Match: A0A067EHT9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022548mg PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.3e-118
Identity = 237/304 (77.96%), Postives = 260/304 (85.53%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           M+S PPQP AS+PPPKPWERAG +SG  PF+PPSAGNTSDVVE+SGTA PGEIVS+SDRT
Sbjct: 1   MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG----GAYGSTMN-NSLYGSGMYGS---SSYGG 120
           A VNRN++GRP+P+RPWEQNYG+ SYGG    G YGSTMN NS  GSGMYGS    +YGG
Sbjct: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120

Query: 121 GMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180
           G+YGGGMYGNS MYR GGYGG       +YG+SGMYGGGMYNSGFGGPMGGYGMGMGGPY
Sbjct: 121 GLYGGGMYGNS-MYR-GGYGG-------LYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180

Query: 181 GG-QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFD 240
           GG QDPNDPYG PSSPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFD
Sbjct: 181 GGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFD 240

Query: 241 RSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDN 296
           RSGMLYGELARFVLRLLGIKTKP+KV GP+G P+PG  + H +QN +EGPK AP  AWDN
Sbjct: 241 RSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDN 295

BLAST of CSPI04G02630 vs. TrEMBL
Match: V4TWT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021425mg PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 5.8e-117
Identity = 235/304 (77.30%), Postives = 259/304 (85.20%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           M+S PPQP AS+PPPKPWE+AG +SG  PF+PPSAGNTSDVVE+SGTA PGEIVS+SDRT
Sbjct: 1   MESNPPQPPASSPPPKPWEQAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG----GAYGSTMN-NSLYGSGMYGS---SSYGG 120
           A VNRN++GRP+P+RPWEQNYG+ SYG     G YGSTMN NS  GSGMYGS    +YGG
Sbjct: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGTTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120

Query: 121 GMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180
           G+YGGGMYGNS MYR GGYGG       +YG+SGMYGGGMYNSGFGGPMGGYGMGMGGPY
Sbjct: 121 GLYGGGMYGNS-MYR-GGYGG-------LYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180

Query: 181 GG-QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFD 240
           GG QDPNDPYG PSSPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFD
Sbjct: 181 GGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFD 240

Query: 241 RSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDN 296
           RSGMLYGELARFVLRLLGIKTKP+KV GP+G P+PG  + H +QN +EGPK AP  AWDN
Sbjct: 241 RSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDN 295

BLAST of CSPI04G02630 vs. TrEMBL
Match: M5XYN3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009172mg PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110
Identity = 230/303 (75.91%), Postives = 249/303 (82.18%), Query Frame = 1

Query: 6   PQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRTAAVNR 65
           PQPSA+ PPPKPWERAG SSG APF+PPSAG+TSDVVEASGTAKPGEIVSSSDR A VNR
Sbjct: 5   PQPSANGPPPKPWERAGSSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVSSSDRNATVNR 64

Query: 66  NSLGRPVPTRPWEQNYGNNSYGGGAYGSTMN-NSLYGSG---------MYGSSSYG-GGM 125
           N+L RPVP+RPWEQNYG++S  GG YGSTMN NS YGSG         MYGSS  G GG+
Sbjct: 65  NALARPVPSRPWEQNYGSSSNYGG-YGSTMNYNSGYGSGISGMSGMSGMYGSSYGGTGGL 124

Query: 126 YGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGG 185
           YGGGMYGN+SMYR GGYGGG+YGSSGMYG      GGMYNSG G  MGG GMGMGGPYGG
Sbjct: 125 YGGGMYGNNSMYR-GGYGGGMYGSSGMYG------GGMYNSGLGSQMGGIGMGMGGPYGG 184

Query: 186 QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSG 245
           QDPNDPYG P SPPGFW+S LRV  GVVNFFGRI+ILIDQNTQAFHMFM+ALLQLFDRSG
Sbjct: 185 QDPNDPYGGPPSPPGFWISVLRVTQGVVNFFGRIAILIDQNTQAFHMFMSALLQLFDRSG 244

Query: 246 MLYGELARFVLRLLGIKTKPRKV--LGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNV 296
           +LYGELARFVLR+LG+KTKP KV   GP+G P+ G   PH  QN IEGP+PAP G WDNV
Sbjct: 245 LLYGELARFVLRILGVKTKPNKVHPQGPNGGPLHGPHGPHGPQNYIEGPRPAPSGGWDNV 299

BLAST of CSPI04G02630 vs. TrEMBL
Match: A0A0B2RE00_GLYSO (Peroxisomal membrane protein 13 OS=Glycine soja GN=glysoja_010460 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 4.0e-110
Identity = 236/304 (77.63%), Postives = 253/304 (83.22%), Query Frame = 1

Query: 7   QPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRTAAVNRN 66
           QP A++PPPKPWE+AG SSG APF+PPSAGNTSDVVEASGTAKPGEIVSSSDR+AAVNRN
Sbjct: 6   QPQANSPPPKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRN 65

Query: 67  SLGRPVPTRPWEQNYGNNSYGGGAYGSTMN-NSLYGSGMYGSS--SYGGGMYG----GGM 126
           +LGRPVPTRPWEQNYGN++YGG  YGSTMN NS YGSGMYGSS    GGGMYG    GGM
Sbjct: 66  TLGRPVPTRPWEQNYGNSTYGG--YGSTMNYNSGYGSGMYGSSYGGLGGGMYGSSYGGGM 125

Query: 127 YGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPND 186
           YGNS MYR GGYGG       MYG+SGMYGGGMYNSG GGPMGGYGMG GGPYG QDPN+
Sbjct: 126 YGNS-MYR-GGYGG-------MYGSSGMYGGGMYNSGLGGPMGGYGMG-GGPYGEQDPNN 185

Query: 187 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 246
           PYG P SPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFDRSGMLYGE
Sbjct: 186 PYGAPPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRSGMLYGE 245

Query: 247 LARFVLRLLGIKTKPRKV--LGPDGLPIPG---APHPHQ---SQNLIEGPKPAPDGAWDN 296
           LARFVLRLLGIKTK +KV   GP+G P+PG    P PH    + N IE PK AP G+WDN
Sbjct: 246 LARFVLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPKAAPSGSWDN 297

BLAST of CSPI04G02630 vs. TAIR10
Match: AT3G07560.1 (AT3G07560.1 peroxin 13)

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-86
Identity = 193/303 (63.70%), Postives = 217/303 (71.62%), Query Frame = 1

Query: 10  ASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSS--SDRTAAVNRNS 69
           A   PPKPWE+ G +SG  PFRPPS  +T+  VEASGTA PGE+V    +    A N NS
Sbjct: 6   AGGSPPKPWEKEGNTSGPNPFRPPSNTSTAGSVEASGTANPGEVVPPPVNRPNTAANMNS 65

Query: 70  LGRPVPTRPWE-QNYGNNSYGGGAYGSTMN-NSLYGSGMYGSSSYG-GGMYGGGMYGNSS 129
           L RPVP RPWE QNYG+    GG YGS +   S YGSG YGS+  G G  YGGGMYG SS
Sbjct: 66  LSRPVPARPWEQQNYGSTM--GGGYGSNLGMTSGYGSGTYGSALGGYGSSYGGGMYGGSS 125

Query: 130 MYRSGGYGGGLYGSSGMYGNSGM--YGG--GMYNSGFGGPMG-GYGMGMGGPYGGQDPND 189
           MYR G  GGGLYGSSGMYG   M  YGG  G Y  G G  MG G GMGMGGPYG QDPND
Sbjct: 126 MYRGGYGGGGLYGSSGMYGGGAMGGYGGTMGGYGMGMGTGMGMGMGMGMGGPYGSQDPND 185

Query: 190 PYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGE 249
           P+  P SPPGFW+SFLRVM G VNFFGR+++LIDQNTQAFHMFM+ALLQLFDR GMLYGE
Sbjct: 186 PFNQPPSPPGFWISFLRVMQGAVNFFGRVAMLIDQNTQAFHMFMSALLQLFDRGGMLYGE 245

Query: 250 LARFVLRLLGIKTKPRKV----LGPDGLPIPGAPHPHQSQNLIEGPK---PAPDGAWDNV 296
           LARFVLR+LG++T+PRK+     GP+GLP+P    PH +QN +EGPK   P   G WDNV
Sbjct: 246 LARFVLRMLGVRTRPRKMQQPPQGPNGLPLP--HQPHGNQNYLEGPKTAAPGGGGGWDNV 304

BLAST of CSPI04G02630 vs. NCBI nr
Match: gi|449468866|ref|XP_004152142.1| (PREDICTED: peroxisomal membrane protein 13 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 5.3e-164
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120
           AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120

Query: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180
           GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP
Sbjct: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180

Query: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240
           YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL
Sbjct: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240

Query: 241 ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 299
           ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ
Sbjct: 241 ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 298

BLAST of CSPI04G02630 vs. NCBI nr
Match: gi|659108250|ref|XP_008454097.1| (PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein 13 [Cucumis melo])

HSP 1 Score: 550.4 bits (1417), Expect = 1.9e-153
Identity = 286/298 (95.97%), Postives = 288/298 (96.64%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           MDSKPPQPSASNPPPKPWER GGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT
Sbjct: 1   MDSKPPQPSASNPPPKPWERVGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120
           AAVNRNSLGRPVPTRPWEQNYGNNSYGG AYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY
Sbjct: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG-AYGSTMNNSLYGSGMYGSSSYGGGMYGGGMY 120

Query: 121 GNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQDPNDP 180
           GNS MYRSGG  GGLYGSSGMYGNSGMYGGGMYNSG GGPMGGYGMGMGGPYGGQDPNDP
Sbjct: 121 GNS-MYRSGGGYGGLYGSSGMYGNSGMYGGGMYNSGIGGPMGGYGMGMGGPYGGQDPNDP 180

Query: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240
           YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL
Sbjct: 181 YGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGMLYGEL 240

Query: 241 ARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWPNGSQ 299
           ARFVLRLLGIKTKPRKV+GPDGLP+P  PHPHQ QNLIEGPK APDGAWDNVWPNGSQ
Sbjct: 241 ARFVLRLLGIKTKPRKVVGPDGLPLPEPPHPHQGQNLIEGPKAAPDGAWDNVWPNGSQ 296

BLAST of CSPI04G02630 vs. NCBI nr
Match: gi|641831711|gb|KDO50762.1| (hypothetical protein CISIN_1g022548mg [Citrus sinensis])

HSP 1 Score: 433.3 bits (1113), Expect = 3.4e-118
Identity = 237/304 (77.96%), Postives = 260/304 (85.53%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           M+S PPQP AS+PPPKPWERAG +SG  PF+PPSAGNTSDVVE+SGTA PGEIVS+SDRT
Sbjct: 1   MESNPPQPPASSPPPKPWERAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG----GAYGSTMN-NSLYGSGMYGS---SSYGG 120
           A VNRN++GRP+P+RPWEQNYG+ SYGG    G YGSTMN NS  GSGMYGS    +YGG
Sbjct: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGGTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120

Query: 121 GMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180
           G+YGGGMYGNS MYR GGYGG       +YG+SGMYGGGMYNSGFGGPMGGYGMGMGGPY
Sbjct: 121 GLYGGGMYGNS-MYR-GGYGG-------LYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180

Query: 181 GG-QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFD 240
           GG QDPNDPYG PSSPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFD
Sbjct: 181 GGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFD 240

Query: 241 RSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDN 296
           RSGMLYGELARFVLRLLGIKTKP+KV GP+G P+PG  + H +QN +EGPK AP  AWDN
Sbjct: 241 RSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDN 295

BLAST of CSPI04G02630 vs. NCBI nr
Match: gi|567900894|ref|XP_006442935.1| (hypothetical protein CICLE_v10021425mg [Citrus clementina])

HSP 1 Score: 428.7 bits (1101), Expect = 8.3e-117
Identity = 235/304 (77.30%), Postives = 259/304 (85.20%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           M+S PPQP AS+PPPKPWE+AG +SG  PF+PPSAGNTSDVVE+SGTA PGEIVS+SDRT
Sbjct: 1   MESNPPQPPASSPPPKPWEQAGAASGPTPFKPPSAGNTSDVVESSGTANPGEIVSASDRT 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGG----GAYGSTMN-NSLYGSGMYGS---SSYGG 120
           A VNRN++GRP+P+RPWEQNYG+ SYG     G YGSTMN NS  GSGMYGS    +YGG
Sbjct: 61  ATVNRNAVGRPLPSRPWEQNYGSTSYGTTNNYGGYGSTMNYNSSLGSGMYGSYGGGTYGG 120

Query: 121 GMYGGGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180
           G+YGGGMYGNS MYR GGYGG       +YG+SGMYGGGMYNSGFGGPMGGYGMGMGGPY
Sbjct: 121 GLYGGGMYGNS-MYR-GGYGG-------LYGSSGMYGGGMYNSGFGGPMGGYGMGMGGPY 180

Query: 181 GG-QDPNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFD 240
           GG QDPNDPYG PSSPPGFW+S LRVM GVVNFFGRISILIDQNTQAFH+FMTALLQLFD
Sbjct: 181 GGAQDPNDPYGAPSSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFD 240

Query: 241 RSGMLYGELARFVLRLLGIKTKPRKVLGPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDN 296
           RSGMLYGELARFVLRLLGIKTKP+KV GP+G P+PG  + H +QN +EGPK AP  AWDN
Sbjct: 241 RSGMLYGELARFVLRLLGIKTKPKKVNGPNGPPLPGPNNMHGNQNFLEGPKAAPGEAWDN 295

BLAST of CSPI04G02630 vs. NCBI nr
Match: gi|1009112584|ref|XP_015869146.1| (PREDICTED: peroxisomal membrane protein 13-like [Ziziphus jujuba])

HSP 1 Score: 420.6 bits (1080), Expect = 2.3e-114
Identity = 237/301 (78.74%), Postives = 257/301 (85.38%), Query Frame = 1

Query: 1   MDSKPPQPSASNPPPKPWERAGGSSGSAPFRPPSAGNTSDVVEASGTAKPGEIVSSSDRT 60
           MDSKP Q SA++PPPKPWERAGGSSG APF+PPSAGNTSDVVEASGTA  GEIVS+SDR+
Sbjct: 1   MDSKP-QSSANSPPPKPWERAGGSSGPAPFKPPSAGNTSDVVEASGTANHGEIVSTSDRS 60

Query: 61  AAVNRNSLGRPVPTRPWEQNYGNNSYGGGAYGSTMN-NSLYGSGMYGSSSYGGGM---YG 120
           A  NRN+LGRP P+RPWEQNYGN+SYGG  YGSTMN NS YGSGMY  SSYGGG+   YG
Sbjct: 61  ATANRNALGRPAPSRPWEQNYGNSSYGG--YGSTMNYNSGYGSGMY--SSYGGGIGGTYG 120

Query: 121 GGMYGNSSMYRSGGYGGGLYGSSGMYGNSGMYGGGMYNSGFGGPMGGYGMGMGGPYGGQD 180
           GG+YGNS MYR GGYGGGLYGSSGMYG      GGMYN GFGGPMGGYGMGMGGPYG +D
Sbjct: 121 GGLYGNS-MYR-GGYGGGLYGSSGMYG------GGMYNGGFGGPMGGYGMGMGGPYGAED 180

Query: 181 PNDPYGPPSSPPGFWMSFLRVMHGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGML 240
           PN+P+G P SPPGFWMS LRVM GVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGML
Sbjct: 181 PNNPFGGPPSPPGFWMSVLRVMQGVVNFFGRISILIDQNTQAFHMFMTALLQLFDRSGML 240

Query: 241 YGELARFVLRLLGIKTKPRKVL--GPDGLPIPGAPHPHQSQNLIEGPKPAPDGAWDNVWP 296
           YGELARFVLR+LG++TKP+KV   GPDGLP+PG     Q+ N IEGPK AP G+WDNVW 
Sbjct: 241 YGELARFVLRILGVRTKPKKVQPPGPDGLPLPGP----QNHNYIEGPKAAPSGSWDNVWG 284

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PEX13_ARATH3.8e-8563.70Peroxisomal membrane protein 13 OS=Arabidopsis thaliana GN=PEX13 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KYV0_CUCSA3.7e-164100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010950 PE=4 SV=1[more]
A0A067EHT9_CITSI2.3e-11877.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022548mg PE=4 SV=1[more]
V4TWT7_9ROSI5.8e-11777.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021425mg PE=4 SV=1[more]
M5XYN3_PRUPE1.1e-11075.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009172mg PE=4 SV=1[more]
A0A0B2RE00_GLYSO4.0e-11077.63Peroxisomal membrane protein 13 OS=Glycine soja GN=glysoja_010460 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07560.12.1e-8663.70 peroxin 13[more]
Match NameE-valueIdentityDescription
gi|449468866|ref|XP_004152142.1|5.3e-164100.00PREDICTED: peroxisomal membrane protein 13 [Cucumis sativus][more]
gi|659108250|ref|XP_008454097.1|1.9e-15395.97PREDICTED: LOW QUALITY PROTEIN: peroxisomal membrane protein 13 [Cucumis melo][more]
gi|641831711|gb|KDO50762.1|3.4e-11877.96hypothetical protein CISIN_1g022548mg [Citrus sinensis][more]
gi|567900894|ref|XP_006442935.1|8.3e-11777.30hypothetical protein CICLE_v10021425mg [Citrus clementina][more]
gi|1009112584|ref|XP_015869146.1|2.3e-11478.74PREDICTED: peroxisomal membrane protein 13-like [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006869 lipid transport
biological_process GO:0010351 lithium ion transport
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0008150 biological_process
biological_process GO:0016560 protein import into peroxisome matrix, docking
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005777 peroxisome
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G02630.1CSPI04G02630.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19332PEROXISOMAL MEMBRANE PROTEIN PEX13coord: 8..295
score: 4.2E
NoneNo IPR availablePANTHERPTHR19332:SF2SUBFAMILY NOT NAMEDcoord: 8..295
score: 4.2E