CSPI04G02570 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G02570
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA-binding ASCH domain protein
Location	Chr4 : 1529124 .. 1534449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATTTAGCATATAGTTTAGTTCATCACAAAGCCTCTAAGCAATGCATTGCGATTTTCGACTGCTTTTCACCATCGGATATAAATAGTGATTGTTCAAAATTTGAAAAAAAGTAAAAGAAAAAAAGAAAAGAATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGGTACTGAAATTCAAATTATGAATCCTTTGTTTCTAATTTTCGGTAACGGTAGTAGAAATTGATTCTCTTGAACTCGCGTTTTTCTCTGTTGGTTTTGAAATTTACTTGTCGGGAGTCGTTGATTTTGGTAGCGGATTCAGTGGTAAAGGAGAAATGGTCTACTTCTAATTAGATTCTGGAACTTTATGAGTGTAGTTTGTTTTGATTTTAATAAAACGGAACTAAATTAGATTAGTGATTGTAGTTCATGATTCGTTGAAGGACTAAGCTATTATCTGTAATGGGTTGCTCCCATTTCTTTGAGATCTTTGTATTTGGATTCCTCTGTGATATTTCATGGGCATTTTTAATGCTTGTTCGTTTCTGAACAACGCAAACGCGAGATGATATTTATTCTATTTTGGCTTTATATTATCCAAACGTACCTGTTCTCTTTACTTCAGCAAGCATAAGGTTAAACAAACTTTCCTGTTTTTGATTTATATTTTAATATGAATAACAAGAGGAATGAGAAATACTTCTCTTCACACTCGATATATCACATTCTCTATCAGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGCAAGTGCTTTTACTCATATCATTGGTTGATCGAGTTTATAATCGTGACAATTTCCAACACCCATCTCCTATGTCTAATTTAGTTTTTGCTTGTACATCGCAGGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGGTAATTCTGTTATATTTTCTTAACATTCTTAAGCTTGTGTTAGATGGTATTAAAAGTACTGAATATGTAAACAAGATCGTGCAAAAATCAAGCCTCTCTCACTCAAGGGCTCCAAGTACACAGCACACGTTATACCAAAAACTCAATAACCAAGGATTGGCGCACAAAAAGTTATACCTCGAAAACACCCCATGACACCAACTCTGTTATCAAAGTATTTGCTACAAGAAAAGAATCATGTCACTACTTTTATACTGAACTCTGCACTAGGATACCTCTACCTCTTACTCATTTTTCTTTTAAGTAAAGGCTATTCTTACTCTTGAAAGTTGAATTTTTTACCGTGTAAAATCAACTAGTGTACTACAACTACAAATAACCACAAATAGCTTTCATTGCTTAAGAGAGGCTTAACATCTGAATACCTAACTGAGCATCTAGTGACTTGAATCAGTAACCAATGGCATGTCTATTGGCAATTTAGACACAATGTATAGACAAGATGGTATCCTATCAGAGGAGTCTTGAATTCAAATTCCTTCTTATGGATATTAATAGTTTACATGTCAGGTTTTGTTAGTAATATAATAAAAGATATTAGCTTAAGCTTTTGGGTTCACTTTAGTAGTAGTTTTCTTGGGAATCTTGTCTTGTTGATCTATTGGTTTAGTGTTGTGATTTTTGACATTGATTTCTCTTGTGCAATATATAATTGGTTCTAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGGTATTGCAAGAAACTTTCCCATTATAAAATTGCTTTCTTAGTTACAGTATTGGGGACATTTGAGTGGCTATAGCTGTGAAACATTACATAGATTCTTTGTTGTTATTGGCTCGTTAATTTACAGTTTGGGGAGATAGTCTTGAACTAGACAAAACAACACAAATGTCAAAGTTGCATGTAATTTTATTCTCCAATAATTTTTAACCTCTTTGGTACAGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGTATTAATTCCACAAAAATTCAAAACATTGACATTTCTACACTATATTATTTCCATACAAACTTCTGGAATGCTGTAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTAAGATAAAATACCAATGTCTATAATTTTTCGTTTCCTTGGTATTTCATTATCTTGTTCATGATAATTCTTTAATATGAACTTTCTATTTGTTCTTTTGTTCTATAGAATTTTGATATAATCCTTCTTGCCTATTTATTTTTATTATAGCGTAGTAATTCTAAAAGATTATTTGCTTAGTGTACTTTATGACTTTGAAACATTATTTGTTAGTACCTTGTGATATTTTGCTATATTTGTAATTATTTTTTAGAAGTTTTGCCATTTAAAATAATTCTCCTTATGTTATCTCTCTCGTGTGTGTGAAATAATCTAGCTACCATTTGAATATTGTATTGGTTTATGGGGATGAAACTTGTTTCAGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGTGAGTTTTCTTGCCTCCCTACTTTTCCTTACCTGCATCTTTGCTGCGATGGCCAACATAACAACACAAAAAACGGTAAGAAACAATCAATTTTCAACTTAGTATATTGTTACCTATATATTTTCTTTTTCATTTTCATGTATTGACATCCAAACTTTTGATAATGAAACAATCATCAACAATATTCACAACAATGATCGGTATTAAGTAAGATCATAACTTGAAAAAACTAGTTATTGCAAAATAGCTACATTGCTCCTGAAAATAGGGAAATTTATCCCATCTTCCTATGTAAACAGAAAAAAATTTAAGCTTGGGTTGGCAGGTAGGATAAATCATCATGGATTGGCCTAATCATAAAGGACATGATGTGGTAAAGGGCTTAGAAGGAATGAGTTCAATTCATCGTGACCAGCTATCAAGGATTTAATGACCTACGAGTTTTCTGGATGCCCAAATGTTGTAGGGAAATTTATCCCATCTTCCTATGTAAACAGAAAAAAATTTAAGCTTGGGTTGGCAGGTAGGATAAATCATCATGGATTGGCCTAATCATAAAGGACATGATGTGGTAAAGGGCTTAGAAGGAATGAGTTCAATTCATCGTGACCAGCTATCAAGGATTTAATGACCTACGAGTTTTCTGGATGCCCAAATGTTGAAGGCTTAGATGTGTTGTTTGTGAGATTGGACATCTCAACTAGGTTCACACTCCCATAGTACCCTCATCATATCCAAAATACAAGAACAATACCAGTCATGAAAAGACCAAAGTAACAACCAAAATAACAATATAAACTACGTACATTAGACAGAAGAAGCAAGGCTGAAAAATAAAAACTTAATGGTAGAAATACATAATAAAGCTCGTCAAAACTACAAAAGCACAAATTCTGAACTAGCAATTGGGGGAAACTTCATTGAATCTCTTTAGGTGAAGGTAGTCCAATTGAGGCAGATATCCTGTATGGAGTAATCTTTGAATTTTGTATTTGAAGAACACCAAGCTGCTGCATTTCTTTTTAGAATTGTCTACGATGTCAACTCAATCCTTTTTTTAATCATGGAAGATGTCAACCCAATCCTTTTTTGAGCATAGAAAAACTATCGAAGCTGTTTTGAGCATAGAAAATATGCTAAACCAACAATTAGATGAGAAGGGATGGAAAATGAATGTGTATTAGGAGCTCACTGTTTTCAAGCAAAGGGGGCACACGGAAGGCAGCAAACACATATTGGGAAGCTTCCTTTGCATAGTCTTAAAACAGTTTAGAACCCACCACCATAATCTAAAACAGGACATTTATTCTCCTTGCACTGCTGGTTTTCTAAAGTGCTTTAAAGTAATCTTTTTTCAAAGGTAAAGAGGGAGAGAGGGGTCCCCTTTTCTTGGACCCCTTCTTTCCCCTCTTTTTCTAAAGTGCTTCAAAGTTATCTTTTTTTTCAAAACTGTTAGTTAAGTACTATTCTCAAAGAGAGGGGGTCCCAAGTACTATAAACTTGGATCCTATTGTAGTTCTTCATTGTAAATAGTGATTCTTGTTAGGAGTATCCTAACAGTTTCTCCACAAAAAATACTCAAAGAAATCTATGCTCAATAAAAAATATATATATATATATTCAGATGTGTATTCTGTTCAATATATAATATAATTAGAGATATATAGCAGTTGCGTTTTAAAGTCTAGAGTTGGTACGTTGGGATCACGAAGTTTACGTTTGGATAGTCGAGTTACACATGTTGATTATTAATAAATGTGCATTAAAGAGAGAAGATGAAGTTTTCAATAAAACTACAAACTTGATTGATAATCATTTAACCATATAATGTGAAACCAATACATGTGTGAAAAACAATAAAACACTTCTTTTTTGTACTATACTAAATGGAAAATGACAAGATTGCGTCAGTTGAAGCAGAGATTTGTTTAATATTTCAAATTTTGATTAGTAATTTGATTCCTTTTTTTATCCCAGTCCTATCATGAAAAATAATAACTTTTCTTATTGCATTCTGTGTCTCCATTATCTAAGACACATTTTATTATCTTCTTTTGATAGGCTTATTTTGGTCGTTCGATGATGAAGATTTAAAAGTGCAAAATAAGCTTCTCCTTGGAAGGAATGTATTTGGCTATTTAAAGAAAAAGGTCTAATTGTGTGCGAAACCTAACGCCTCAAACTAATTATGATGTGTTCTAATTTGACGAGTTAGTGTTTAATAACTTAACCTTAATAGTTTTTAGTAGAGATGAGCATAGTAGACCATAAAACCGAGTCGACTAACCAAATCGAAGGTAAGAAGAGGTTGGTCTATGTCGGTTTGGAAAAAATCTAAATCGACGACATTTGTTTAAAAATTTTCAAATGTATAATCTGACGATCATTTACTAGTTTGAACATTTGTAGTTGATGTCAGTTTGAACATTTACTAAATTGACCATAGTTAATTCGGTATTGGTTTAGTT

mRNA sequence

ATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGTGAGTTTTCTTGCCTCCCTACTTTTCCTTACCTGCATCTTTGCTGCGATGGCCAACATAACAACACAAAAAACGGCTTATTTTGGTCGTTCGATGATGAAGATTTAA

Coding sequence (CDS)

ATGCAGCGACGGCCATGTTCACCCGGATCATCACCGGTTGAGCTACGAGACTGCCTAGAAGAGCTGCTCAAGTTCACGCTCCAATCTCACATCAATGGAACCCTTGACATAGACCATGATCTAGGGTTTTCTACAGACTTCTCTTCTCACCTTCTCAATCATAATGATTGTCCTGATGTTTCCAGATTGTATAAGGATCTAGTATCCACTCTTTTGAAGTCAGTTTCCAAAGCATCGTGTGGGTCACTAGATGACTTCGAGGACGAAGAAGAAAGTAATGAGATTGCTGAAGGACGAGCTGAATTAGTAAATGTTCTAAAGACAGTAAACTTTGAGCTTCATGTTCAGGAGCCTTTCTTTACTCAGCTAAAAGATGGCCTAAAGAGAGTGGAGGGAAGATGTGCTGCTGGTAATTACAATCGAATTCAGTCTGGAGCGTTGATACTTTTCAATAAATGTTTGTTGTTTGAGGTTCAGGATGTACGTCAATACCCTTCATTTTATGCGATGTTGAAAGCAGAGAGCCTTGATAACGTTCTTCCTGGAGTAAAAACCTTAACAGATGGTGTTCAAATATACAGGAACTTTTACTCTGAAGAGAAAGAACTGTCCAATGGTGTTCTTGGGATTCATGTCAAAAAATCTGTTGCCCAGCCATACATTATTTTGGCCAGAATCATATCTGTGAGTTTTCTTGCCTCCCTACTTTTCCTTACCTGCATCTTTGCTGCGATGGCCAACATAACAACACAAAAAACGGCTTATTTTGGTCGTTCGATGATGAAGATTTAA

Homology

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BLAST of CSPI04G02570 vs. TrEMBL
Match: A0A0A0KTQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010400 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.1e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 238

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BLAST of CSPI04G02570 vs. TrEMBL
Match: A0A067LH39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20905 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 140/243 (57.61%), Postives = 171/243 (70.37%), Query Frame = 1


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDVSR- 63
           +P SPG+SPV+LR C+EEL+KFTL S IN TL++D  LG ST+  S+LL HN    VS  
Sbjct: 3   QPSSPGTSPVDLRGCIEELMKFTLHSQINQTLEVD--LGLSTELCSYLLQHNPHDSVSGQ 62

Query: 64  -----LYKDLVSTLLKSVSKASC-------GSLDDFEDEEESNE-----IAEGRAELVNV 123
                LYK L STL + ++            SLD+  D +E  +     + EG   L+N+
Sbjct: 63  VLVHPLYKHLASTLYEYITSGELCERSNKMTSLDEDSDLKERGKWNELILVEG-TNLLNI 122

Query: 124 LKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYP 183
           LKTVNFELHVQEPFFTQLKDGLK VEGRCA G+YNRI SGA +LFNKCL+ +VQDV +Y 
Sbjct: 123 LKTVNFELHVQEPFFTQLKDGLKTVEGRCAVGDYNRIVSGAWLLFNKCLMLQVQDVHRYA 182

Query: 184 SFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILAR 229
           SF  ML+AESL  VLPGVKT+ +GV++YR FY+EEKE +NGVL I V  S AQPYI LAR
Sbjct: 183 SFSEMLEAESLAKVLPGVKTIDEGVEVYRKFYAEEKERANGVLAICVANSTAQPYIPLAR 242

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BLAST of CSPI04G02570 vs. TrEMBL
Match: A0A061ER65_THECC (RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019974 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.5e-62
Identity = 132/252 (52.38%), Postives = 170/252 (67.46%), Query Frame = 1


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           M++ P SPG++PV+LR+C+EEL+KFTL S +NGTL+   D+G S +F S LL+H+    +
Sbjct: 1   MEQPPSSPGTNPVDLRNCVEELVKFTLHSQMNGTLE--WDIGLSQEFCSSLLDHHSADPI 60

Query: 61  SR-----------LYKDLVSTLLKSVSKAS------CGSLDDF-------EDEEESNEIA 120
           S            LY  L S   + ++  S      C  L          + EE  + + 
Sbjct: 61  STIANSPGVSQNPLYIQLASAFYEIITFGSLQASSKCNKLASSYEGSGLKQKEEWIDLVH 120

Query: 121 EGRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLF 180
           +  +EL  +LK +NFELHVQEPFFTQLKDGLK +EGRCA G+YNRI SGALILFNKCL+ 
Sbjct: 121 KKGSELAEILKNINFELHVQEPFFTQLKDGLKTMEGRCAVGDYNRIASGALILFNKCLVL 180

Query: 181 EVQDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSV 229
           EVQDV  Y SF+ ML+AESL  VLPGV+T+ +G+Q+YR FYSEEKE+SNGVL I V K  
Sbjct: 181 EVQDVHHYASFFEMLEAESLAKVLPGVETIDEGIQVYRKFYSEEKEMSNGVLAICVAKVA 240

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BLAST of CSPI04G02570 vs. TrEMBL
Match: A0A0D2P9T3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G105900 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.7e-61
Identity = 131/252 (51.98%), Postives = 165/252 (65.48%), Query Frame = 1


Query: 7   SPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDVSR---- 66
           SPG++PVEL + +EELLKFTLQSH+NGTL++D  +G S  F S LLNH     +S     
Sbjct: 6   SPGTNPVELSNSIEELLKFTLQSHLNGTLELD--IGLSKQFCSSLLNHPSTSPISLNASS 65

Query: 67  --------LYKDLVSTLLKSVSKAS-------------CGSLDDFEDEEESNEIAEGRAE 126
                   LYK L   L + ++  S             C   D  + ++  + + +  +E
Sbjct: 66  SSEASQNPLYKQLARALYEIITFGSLQESSDCNKVASFCQGSDLKQKDDWFDLVHKEGSE 125

Query: 127 LVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDV 186
           L  +LK +NFELHVQEPFFTQLKDG+K VEGRCA G+YNRI +GALILFNKCL+ EVQDV
Sbjct: 126 LAEILKNINFELHVQEPFFTQLKDGIKAVEGRCAVGDYNRIATGALILFNKCLVLEVQDV 185

Query: 187 RQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYI 234
             Y SF+ ML+AESL  VLPGVKT+ +GVQ+YR FY+EEKE +NGV  I V K  AQPY+
Sbjct: 186 HYYASFFEMLEAESLAKVLPGVKTIDEGVQVYRKFYTEEKEKTNGVAAICVAKMAAQPYL 245

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BLAST of CSPI04G02570 vs. TrEMBL
Match: V4T7G5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021666mg PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.8e-60
Identity = 135/251 (53.78%), Postives = 167/251 (66.53%), Query Frame = 1


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHN-------- 63
           +P SPG SP +   C+EE LKF L+SHIN TL++D  LG S D  S LL HN        
Sbjct: 3   QPSSPGRSPFDYTKCIEEALKFILESHINQTLELD--LGLSKDLCSFLLTHNVPLTAGSS 62

Query: 64  DCPDVSRLYKDLVSTLLKSV-SKASCGSL---------DDFEDEEESNEIA--EGRAELV 123
           D       YK L S   +SV S ASCG+          DD +  E+  ++   EG +E++
Sbjct: 63  DTESQYPFYKRLASVFHESVTSTASCGAFSNIATLNEDDDLKKREDWGKLVLKEG-SEMI 122

Query: 124 NVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQ 183
            +LKTVNFELHVQEP+FTQLKDGLK VEGRCA G+YNRI SG+LIL NKCL+ +VQDV  
Sbjct: 123 ELLKTVNFELHVQEPYFTQLKDGLKTVEGRCAVGDYNRIGSGSLILCNKCLVLKVQDVHG 182

Query: 184 YPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIIL 235
           Y SF  ML+AESL  VLPG+KT+ +GVQ+YR FY+EEKE +NGV+ I V K  AQP++ L
Sbjct: 183 YLSFSEMLQAESLAKVLPGIKTIDEGVQVYRRFYTEEKEKTNGVVAICVTKPAAQPFLCL 242

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BLAST of CSPI04G02570 vs. TAIR10
Match: AT3G03320.1 (AT3G03320.1 RNA-binding ASCH domain protein)

HSP 1 Score: 218.4 bits (555), Expect = 4.8e-57
Identity = 116/227 (51.10%), Postives = 154/227 (67.84%), Query Frame = 1


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNH-NDCPDVSR 63
           +P SPG+  V+LR+C+E LL+F+L+SH+N ++    DL  + DF  HLL    D  + S 
Sbjct: 3   QPMSPGTKSVDLRECMESLLRFSLRSHLNESVP-SFDLDLTRDFCLHLLGEATDSTEKSA 62

Query: 64  LYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRA-ELVNVLKTVNFELHVQEPFFT 123
           +YK L + L + ++       D   + E+ +++  G   +L+N+LK VNFELHVQEP+FT
Sbjct: 63  VYKLLATALSECLASEG----DKNSNLEKYSKLIHGLGYDLINMLKEVNFELHVQEPYFT 122

Query: 124 QLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVLP 183
           QLKDGLK VEGRCA G+Y RI SG  +LFNKCLL EVQDV +Y SF  MLK E L  VLP
Sbjct: 123 QLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAKVLP 182

Query: 184 GVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS 229
           GV+++ +GVQ+YRNFYSEEKE  NGV+ I V K   QP   LA ++S
Sbjct: 183 GVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLS 224

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BLAST of CSPI04G02570 vs. TAIR10
Match: AT2G43465.1 (AT2G43465.1 RNA-binding ASCH domain protein)

HSP 1 Score: 167.5 bits (423), Expect = 9.7e-42
Identity = 99/250 (39.60%), Postives = 144/250 (57.60%), Query Frame = 1


Query: 13  VELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLL-------------------- 72
           +++RDCL+E++KFTL         ++ D+G + +F S LL                    
Sbjct: 2   IKIRDCLDEMVKFTLD------YCVEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALL 61

Query: 73  -NHNDCPDVSRLYKDLVSTLLKSVSKAS-CGSLDDF-----------EDEEESNEIAEGR 132
              +  PD   LYK L   LLKS+   S CG+ +             +++E S  I +  
Sbjct: 62  HRFSGVPDYP-LYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKG 121

Query: 133 AELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQ-SGALILFNKCLLFEV 192
           +ELVN LK V  EL VQEP F+ +KDG+K VE RC    Y+RI+  G++++ NKCL+FEV
Sbjct: 122 SELVNALKDVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEV 181

Query: 193 QDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQ 229
            ++ QY SFY +LKAES + V PG KT+ +G+Q++R  Y  ++E  NGV+ IH+ KSVAQ
Sbjct: 182 LELHQYASFYELLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQ 241

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BLAST of CSPI04G02570 vs. NCBI nr
Match: gi|449468876|ref|XP_004152147.1| (PREDICTED: uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 7.3e-132
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISAYFGRSMMKI 238

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: gi|778689810|ref|XP_011653020.1| (PREDICTED: uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus])

HSP 1 Score: 464.5 bits (1194), Expect = 1.1e-127
Identity = 238/263 (90.49%), Postives = 238/263 (90.49%), Query Frame = 1


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV
Sbjct: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60

Query: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120
           SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF
Sbjct: 61  SRLYKDLVSTLLKSVSKASCGSLDDFEDEEESNEIAEGRAELVNVLKTVNFELHVQEPFF 120

Query: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180
           TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL
Sbjct: 121 TQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYPSFYAMLKAESLDNVL 180

Query: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS------------ 239
           PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIIS            
Sbjct: 181 PGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILARIISVSFLASLLFLTC 240

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: gi|643737870|gb|KDP43895.1| (hypothetical protein JCGZ_20905 [Jatropha curcas])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 140/243 (57.61%), Postives = 171/243 (70.37%), Query Frame = 1


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDVSR- 63
           +P SPG+SPV+LR C+EEL+KFTL S IN TL++D  LG ST+  S+LL HN    VS  
Sbjct: 3   QPSSPGTSPVDLRGCIEELMKFTLHSQINQTLEVD--LGLSTELCSYLLQHNPHDSVSGQ 62

Query: 64  -----LYKDLVSTLLKSVSKASC-------GSLDDFEDEEESNE-----IAEGRAELVNV 123
                LYK L STL + ++            SLD+  D +E  +     + EG   L+N+
Sbjct: 63  VLVHPLYKHLASTLYEYITSGELCERSNKMTSLDEDSDLKERGKWNELILVEG-TNLLNI 122

Query: 124 LKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYP 183
           LKTVNFELHVQEPFFTQLKDGLK VEGRCA G+YNRI SGA +LFNKCL+ +VQDV +Y 
Sbjct: 123 LKTVNFELHVQEPFFTQLKDGLKTVEGRCAVGDYNRIVSGAWLLFNKCLMLQVQDVHRYA 182

Query: 184 SFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILAR 229
           SF  ML+AESL  VLPGVKT+ +GV++YR FY+EEKE +NGVL I V  S AQPYI LAR
Sbjct: 183 SFSEMLEAESLAKVLPGVKTIDEGVEVYRKFYAEEKERANGVLAICVANSTAQPYIPLAR 242

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: gi|802555126|ref|XP_012065263.1| (PREDICTED: uncharacterized protein LOC105628461 [Jatropha curcas])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 140/243 (57.61%), Postives = 171/243 (70.37%), Query Frame = 1


Query: 4   RPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDVSR- 63
           +P SPG+SPV+LR C+EEL+KFTL S IN TL++D  LG ST+  S+LL HN    VS  
Sbjct: 26  QPSSPGTSPVDLRGCIEELMKFTLHSQINQTLEVD--LGLSTELCSYLLQHNPHDSVSGQ 85

Query: 64  -----LYKDLVSTLLKSVSKASC-------GSLDDFEDEEESNE-----IAEGRAELVNV 123
                LYK L STL + ++            SLD+  D +E  +     + EG   L+N+
Sbjct: 86  VLVHPLYKHLASTLYEYITSGELCERSNKMTSLDEDSDLKERGKWNELILVEG-TNLLNI 145

Query: 124 LKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLFEVQDVRQYP 183
           LKTVNFELHVQEPFFTQLKDGLK VEGRCA G+YNRI SGA +LFNKCL+ +VQDV +Y 
Sbjct: 146 LKTVNFELHVQEPFFTQLKDGLKTVEGRCAVGDYNRIVSGAWLLFNKCLMLQVQDVHRYA 205

Query: 184 SFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSVAQPYIILAR 229
           SF  ML+AESL  VLPGVKT+ +GV++YR FY+EEKE +NGVL I V  S AQPYI LAR
Sbjct: 206 SFSEMLEAESLAKVLPGVKTIDEGVEVYRKFYAEEKERANGVLAICVANSTAQPYIPLAR 265

[Close]

BLAST of CSPI04G02570 vs. NCBI nr
Match: gi|590655022|ref|XP_007033868.1| (RNA-binding ASCH domain protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 245.7 bits (626), Expect = 8.0e-62
Identity = 132/252 (52.38%), Postives = 170/252 (67.46%), Query Frame = 1


Query: 1   MQRRPCSPGSSPVELRDCLEELLKFTLQSHINGTLDIDHDLGFSTDFSSHLLNHNDCPDV 60
           M++ P SPG++PV+LR+C+EEL+KFTL S +NGTL+   D+G S +F S LL+H+    +
Sbjct: 1   MEQPPSSPGTNPVDLRNCVEELVKFTLHSQMNGTLE--WDIGLSQEFCSSLLDHHSADPI 60

Query: 61  SR-----------LYKDLVSTLLKSVSKAS------CGSLDDF-------EDEEESNEIA 120
           S            LY  L S   + ++  S      C  L          + EE  + + 
Sbjct: 61  STIANSPGVSQNPLYIQLASAFYEIITFGSLQASSKCNKLASSYEGSGLKQKEEWIDLVH 120

Query: 121 EGRAELVNVLKTVNFELHVQEPFFTQLKDGLKRVEGRCAAGNYNRIQSGALILFNKCLLF 180
           +  +EL  +LK +NFELHVQEPFFTQLKDGLK +EGRCA G+YNRI SGALILFNKCL+ 
Sbjct: 121 KKGSELAEILKNINFELHVQEPFFTQLKDGLKTMEGRCAVGDYNRIASGALILFNKCLVL 180

Query: 181 EVQDVRQYPSFYAMLKAESLDNVLPGVKTLTDGVQIYRNFYSEEKELSNGVLGIHVKKSV 229
           EVQDV  Y SF+ ML+AESL  VLPGV+T+ +G+Q+YR FYSEEKE+SNGVL I V K  
Sbjct: 181 EVQDVHHYASFFEMLEAESLAKVLPGVETIDEGIQVYRKFYSEEKEMSNGVLAICVAKVA 240

The following BLAST results are available for this feature:

BLAST of CSPI04G02570 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI04G02570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTQ3_CUCSA	5.1e-132	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010400 PE=4 SV=1	[more]
A0A067LH39_JATCU	1.2e-64	57.61	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20905 PE=4 SV=1	[more]
A0A061ER65_THECC	5.5e-62	52.38	RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_01...	[more]
A0A0D2P9T3_GOSRA	4.7e-61	51.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G105900 PE=4 SV=1	[more]
V4T7G5_9ROSI	1.8e-60	53.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021666mg PE=4 SV=1	[more]

BLAST of CSPI04G02570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03320.1	4.8e-57	51.10	RNA-binding ASCH domain protein	[more]
AT2G43465.1	9.7e-42	39.60	RNA-binding ASCH domain protein	[more]

BLAST of CSPI04G02570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468876\|ref\|XP_004152147.1\|	7.3e-132	100.00	PREDICTED: uncharacterized protein LOC105434383 isoform X2 [Cucumis sativus]	[more]
gi\|778689810\|ref\|XP_011653020.1\|	1.1e-127	90.49	PREDICTED: uncharacterized protein LOC105434383 isoform X1 [Cucumis sativus]	[more]
gi\|643737870\|gb\|KDP43895.1\|	1.7e-64	57.61	hypothetical protein JCGZ_20905 [Jatropha curcas]	[more]
gi\|802555126\|ref\|XP_012065263.1\|	1.7e-64	57.61	PREDICTED: uncharacterized protein LOC105628461 [Jatropha curcas]	[more]
gi\|590655022\|ref\|XP_007033868.1\|	8.0e-62	52.38	RNA-binding ASCH domain protein, putative isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007374	ASCH_domain
IPR015947	PUA-like_sf
IPR007374	ASCH_domain
IPR015947	PUA-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G02570.2	CSPI04G02570.2	mRNA
CSPI04G02570.1	CSPI04G02570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007374	ASCH domain	PFAM	PF04266	ASCH	coord: 113..202 score: 6.
IPR015947	PUA-like domain	unknown	SSF88697	PUA domain-like	coord: 110..218 score: 4.31
None	No IPR available	GENE3D	G3DSA:3.10.480.10		coord: 110..219 score: 2.9
None	No IPR available	PANTHER	PTHR34204	FAMILY NOT NAMED	coord: 5..228 score: 1.4
None	No IPR available	PANTHER	PTHR34204:SF2	RNA-BINDING ASCH DOMAIN PROTEIN	coord: 5..228 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G02570	Cla012795	Watermelon (97103) v1	cpiwmB307
CSPI04G02570	Csa4G010400	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G02570	ClCG07G011710	Watermelon (Charleston Gray)	cpiwcgB343
CSPI04G02570	Lsi07G003660	Bottle gourd (USVL1VR-Ls)	cpilsiB311
CSPI04G02570	CsaV3_4G002500	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G02570	Cla97C07G138440	Watermelon (97103) v2	cpiwmbB333
CSPI04G02570	Bhi01G002886	Wax gourd	cpiwgoB381
CSPI04G02570	Cucsa.095550	Cucumber (Gy14) v1	cgycpiB103
CSPI04G02570	CmaCh14G014150	Cucurbita maxima (Rimu)	cmacpiB263
CSPI04G02570	CmoCh14G014510	Cucurbita moschata (Rifu)	cmocpiB250
CSPI04G02570	CsGy4G002440	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G02570	Carg06568	Silver-seed gourd	carcpiB0133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G02570	Silver-seed gourd	carcpiB0730
CSPI04G02570	Cucurbita maxima (Rimu)	cmacpiB850
CSPI04G02570	Cucurbita moschata (Rifu)	cmocpiB833
CSPI04G02570	Melon (DHL92) v3.5.1	cpimeB310
CSPI04G02570	Cucurbita pepo (Zucchini)	cpecpiB617
CSPI04G02570	Cucurbita pepo (Zucchini)	cpecpiB871
CSPI04G02570	Melon (DHL92) v3.6.1	cpimedB301