CSPI04G02240 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G02240
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionEthylene-responsive transcription factor ERF021
LocationChr4 : 1316655 .. 1317149 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGATCCTTTGAAAAGATACAGAGGAGTTCGGAAGCGGGGGTGGGGTAAATGTACATCTGCCATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTCTGGATTGGAAGTTTCGACACGCCAGAGATGGCGGCTACGGCATACGATGCTGTCGCCAACTTCTTCCATGGCCCCAAAGCACGTTTAAACTTTCCCGAACTGCGCCACACTCTCCCCAAATTCCCACCTGATGCAACTGTCCGTAAAATTCGAGCGTTGGCTCGAGGTGCCGCTGAAGGCAGCCATGGAGGTGGAGGTGGAAGTTCTATTTCCGGCGTCACGGAACCAATCCAATCCCTCGAGGAATGGCAAATCCAATCCCTCGAGAAAATGCCAATTTATTCTCCATTATTACACCAAACAATGATGGAGGATGATACTTCGGGTTTTGATCTTTACGGCGGTGACACATACGATACTTCGATAGATCTTTGGAACGACCAAATGCACTGA

mRNA sequence

ATGGGAGATCCTTTGAAAAGATACAGAGGAGTTCGGAAGCGGGGGTGGGGTAAATGTACATCTGCCATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTCTGGATTGGAAGTTTCGACACGCCAGAGATGGCGGCTACGGCATACGATGCTGTCGCCAACTTCTTCCATGGCCCCAAAGCACGTTTAAACTTTCCCGAACTGCGCCACACTCTCCCCAAATTCCCACCTGATGCAACTGTCCGTAAAATTCGAGCGTTGGCTCGAGGTGCCGCTGAAGGCAGCCATGGAGGTGGAGGTGGAAGTTCTATTTCCGGCGTCACGGAACCAATCCAATCCCTCGAGGAATGGCAAATCCAATCCCTCGAGAAAATGCCAATTTATTCTCCATTATTACACCAAACAATGATGGAGGATGATACTTCGGGTTTTGATCTTTACGGCGGTGACACATACGATACTTCGATAGATCTTTGGAACGACCAAATGCACTGA

Coding sequence (CDS)

ATGGGAGATCCTTTGAAAAGATACAGAGGAGTTCGGAAGCGGGGGTGGGGTAAATGTACATCTGCCATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTCTGGATTGGAAGTTTCGACACGCCAGAGATGGCGGCTACGGCATACGATGCTGTCGCCAACTTCTTCCATGGCCCCAAAGCACGTTTAAACTTTCCCGAACTGCGCCACACTCTCCCCAAATTCCCACCTGATGCAACTGTCCGTAAAATTCGAGCGTTGGCTCGAGGTGCCGCTGAAGGCAGCCATGGAGGTGGAGGTGGAAGTTCTATTTCCGGCGTCACGGAACCAATCCAATCCCTCGAGGAATGGCAAATCCAATCCCTCGAGAAAATGCCAATTTATTCTCCATTATTACACCAAACAATGATGGAGGATGATACTTCGGGTTTTGATCTTTACGGCGGTGACACATACGATACTTCGATAGATCTTTGGAACGACCAAATGCACTGA
Homology
[Close]
BLAST of CSPI04G02240 vs. Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-18
Identity = 59/137 (43.07%), Postives = 78/137 (56.93%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  G + ++W+GSF+TPEMAATAYD  A  F G +ARLNFPE
Sbjct: 24  YRGVRKRKWGKWVSEIREP--GTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 83

Query: 68  LRHTLPKFPPDATVRKIRALARGA-----AEGSHGG--GGGSSISGVTEPIQSLEEWQIQ 127
           L  +LP+ P D++   IR     A      EG+        SS S V   +  L   +IQ
Sbjct: 84  LASSLPR-PADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQ 143

Query: 128 SLEKMPIYSP--LLHQT 136
           ++ +  + SP  ++H T
Sbjct: 144 AINESTLGSPTTMMHST 157

[Close]
BLAST of CSPI04G02240 vs. Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRG+R+R WGK  S I  P  GK+ ++W+GS++T EMAA AYDA A    G    LNFPE
Sbjct: 20  YRGIRRRKWGKWVSEIREP--GKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPE 79

Query: 68  LRHTLPKFPPDATVRKIRALARGAA---------EGSHGGGGGSSISGVTEPIQSLEEWQ 127
           L  + P+ P  ++   I+A A+ AA         E +   G G S  G++         Q
Sbjct: 80  LVDSFPR-PESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPD-------Q 139

Query: 128 IQSLEKMPIYSPLLHQTMMEDDTSGFDLYG 149
           IQ++ + P+ SP +      +     +LYG
Sbjct: 140 IQAINESPLDSPRMGWMQDLEVADYEELYG 159

[Close]
BLAST of CSPI04G02240 vs. Swiss-Prot
Match: RA213_ARATH (Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana GN=RAP2-13 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-13
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1 

Query: 4   PLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARL 63
           P K YRGVR+R WGK  + I  P+   + +LW+G+FDT E AA AYD  A    G  ARL
Sbjct: 79  PTKLYRGVRQRHWGKWVAEIRLPRN--RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARL 138

Query: 64  NFPELRHTLPKFPPDATV-RKIRALARGAAE 94
           NFP+LRH     P  ++V  K+ A+ +  AE
Sbjct: 139 NFPDLRHNDEYQPLQSSVDAKLEAICQNLAE 167

[Close]
BLAST of CSPI04G02240 vs. Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.8e-13
Identity = 43/85 (50.59%), Postives = 51/85 (60.00%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           Y GVRKR WGK  S I  P+  K+ ++W+GSF  PEMAA AYD  A    G KA+LNFPE
Sbjct: 45  YHGVRKRRWGKWVSEIREPR--KKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 104

Query: 68  LRHTLPKFPPDATVRKIRALARGAA 93
               LP+ P   T R I+  A  AA
Sbjct: 105 EIEDLPR-PSTCTPRDIQVAAAKAA 126

[Close]
BLAST of CSPI04G02240 vs. Swiss-Prot
Match: ERF38_ARATH (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF038 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.4e-12
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           +RGVR R WGK  S I  PK  K+ ++W+G+F T EMAA A+D  A    G  A LNFPE
Sbjct: 45  FRGVRMRQWGKWVSEIREPK--KKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 104

Query: 68  LRHTLPKFPPDATVRKIRALARGAA 93
           L + LP+ P  A  + I+A A  AA
Sbjct: 105 LAYHLPR-PASADPKDIQAAAAAAA 126

[Close]
BLAST of CSPI04G02240 vs. TrEMBL
Match: A0A0A0KTL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007650 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.7e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 60
           MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK
Sbjct: 16  MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 75

Query: 61  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 120
           ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ
Sbjct: 76  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 135

Query: 121 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 165
           SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH
Sbjct: 136 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 179

[Close]
BLAST of CSPI04G02240 vs. TrEMBL
Match: B9T777_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0168650 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.7e-20
Identity = 70/151 (46.36%), Postives = 85/151 (56.29%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAATAYD  A +F G +A+LNFP 
Sbjct: 43  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 102

Query: 68  LRHTLPKFPPDATVRKIRALARGAA-----------EGSHGGGGG-----SSISGVTEPI 127
           L H LP  P       IR  A  AA           EGS+GGGGG      S S V  PI
Sbjct: 103 LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 162

Query: 128 Q-SLEEWQIQSLEKMPIYSPLLHQTM--MED 140
              L   +IQ++ + P+ SP +   M  MED
Sbjct: 163 TVRLSPREIQAINESPLDSPKMWMQMATMED 190

[Close]
BLAST of CSPI04G02240 vs. TrEMBL
Match: B9IQB6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10420g PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 63/139 (45.32%), Postives = 80/139 (57.55%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAA AYD  A  F G  AR+NFP+
Sbjct: 13  YRGVRKRKWGKWVSEIREP--GKKNRIWLGSFETPEMAAAAYDVAALHFRGHDARVNFPD 72

Query: 68  LRHTLPKFPPDATVRKIRALARGA--------AEGSHGGGGGSSISGVTEPIQSLEEWQI 127
           L H LPK P  ++   IR  A  A        AE SHGG   S++  +T     L   QI
Sbjct: 73  LVHDLPK-PTSSSSEDIRMAAHEAAMSLRPFTAESSHGGSSTSNVGPIT---VRLSASQI 132

Query: 128 QSLEKMPIYSPLLHQTMME 139
           Q++ + P+ SP +   M E
Sbjct: 133 QAINESPLDSPKMWMHMSE 145

[Close]
BLAST of CSPI04G02240 vs. TrEMBL
Match: B9MWI0_POPTR (AP2 domain-containing transcription factor family protein OS=Populus trichocarpa GN=POPTR_0013s10340g PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-19
Identity = 67/163 (41.10%), Postives = 89/163 (54.60%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAATAYD  A  F G  A+LNFP+
Sbjct: 16  YRGVRKRKWGKWVSEIREP--GKKSRIWLGSFETPEMAATAYDVAALHFRGYDAKLNFPD 75

Query: 68  LRHTLPKFPPDATVRKIRALARGAA--------EGSHGGGGGSSISGVTEPIQSLEEWQI 127
           L H+LPK P  +    IR  A  AA        E S GG   S++  +T     L   QI
Sbjct: 76  LVHSLPK-PASSDAEDIRIAAHEAAMSLRPSTVESSQGGSSSSNVGPIT---VRLSPSQI 135

Query: 128 QSLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQ 163
           Q++ + P+ SP +   M     SG  +       +SID+  ++
Sbjct: 136 QAINESPLDSPKMWMQM-----SGIAMPDESMIYSSIDVGEEE 167

[Close]
BLAST of CSPI04G02240 vs. TrEMBL
Match: A0A061FJ37_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_036269 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-18
Identity = 71/171 (41.52%), Postives = 91/171 (53.22%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAA AYD  A    G +ARLNFPE
Sbjct: 34  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAAAAYDVAALHLRGREARLNFPE 93

Query: 68  LRHTLPKFPPDATVRKIRALAR---------GAAEGSHGGGGGSSIS-GVTEPIQSLEEW 127
           L   LP+ PP +    IR +A+          AA  S  GG  SS   GV      L   
Sbjct: 94  LIDCLPR-PPSSNAEDIRMVAQEAALRVRTNAAASSSEAGGSCSSAGPGVGPVTVRLSPT 153

Query: 128 QIQSLEKMPIYSPLLHQTMME----DDTSGF-DLYGGDTYDTSIDLWNDQM 164
           QIQ++ + P+ SP +   M E    D+   F D  G + +D   D+ ND +
Sbjct: 154 QIQAINESPLDSPKMWMQMSEPLMMDEAMMFCDENGENEWD---DMQNDSL 198

[Close]
BLAST of CSPI04G02240 vs. TAIR10
Match: AT1G71450.1 (AT1G71450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 4.7e-19
Identity = 59/137 (43.07%), Postives = 78/137 (56.93%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  G + ++W+GSF+TPEMAATAYD  A  F G +ARLNFPE
Sbjct: 24  YRGVRKRKWGKWVSEIREP--GTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 83

Query: 68  LRHTLPKFPPDATVRKIRALARGA-----AEGSHGG--GGGSSISGVTEPIQSLEEWQIQ 127
           L  +LP+ P D++   IR     A      EG+        SS S V   +  L   +IQ
Sbjct: 84  LASSLPR-PADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSSNVAPTMVRLSPREIQ 143

Query: 128 SLEKMPIYSP--LLHQT 136
           ++ +  + SP  ++H T
Sbjct: 144 AINESTLGSPTTMMHST 157

[Close]
BLAST of CSPI04G02240 vs. TAIR10
Match: AT1G33760.1 (AT1G33760.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-15
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRG+R+R WGK  S I  P  GK+ ++W+GS++T EMAA AYDA A    G    LNFPE
Sbjct: 20  YRGIRRRKWGKWVSEIREP--GKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPE 79

Query: 68  LRHTLPKFPPDATVRKIRALARGAA---------EGSHGGGGGSSISGVTEPIQSLEEWQ 127
           L  + P+ P  ++   I+A A+ AA         E +   G G S  G++         Q
Sbjct: 80  LVDSFPR-PESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPD-------Q 139

Query: 128 IQSLEKMPIYSPLLHQTMMEDDTSGFDLYG 149
           IQ++ + P+ SP +      +     +LYG
Sbjct: 140 IQAINESPLDSPRMGWMQDLEVADYEELYG 159

[Close]
BLAST of CSPI04G02240 vs. TAIR10
Match: AT1G22190.1 (AT1G22190.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1 

Query: 4   PLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARL 63
           P K YRGVR+R WGK  + I  P+   + +LW+G+FDT E AA AYD  A    G  ARL
Sbjct: 79  PTKLYRGVRQRHWGKWVAEIRLPRN--RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARL 138

Query: 64  NFPELRHTLPKFPPDATV-RKIRALARGAAE 94
           NFP+LRH     P  ++V  K+ A+ +  AE
Sbjct: 139 NFPDLRHNDEYQPLQSSVDAKLEAICQNLAE 167

[Close]
BLAST of CSPI04G02240 vs. TAIR10
Match: AT1G01250.1 (AT1G01250.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 43/85 (50.59%), Postives = 51/85 (60.00%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           Y GVRKR WGK  S I  P+  K+ ++W+GSF  PEMAA AYD  A    G KA+LNFPE
Sbjct: 45  YHGVRKRRWGKWVSEIREPR--KKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPE 104

Query: 68  LRHTLPKFPPDATVRKIRALARGAA 93
               LP+ P   T R I+  A  AA
Sbjct: 105 EIEDLPR-PSTCTPRDIQVAAAKAA 126

[Close]
BLAST of CSPI04G02240 vs. TAIR10
Match: AT2G35700.1 (AT2G35700.1 ERF family protein 38)

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           +RGVR R WGK  S I  PK  K+ ++W+G+F T EMAA A+D  A    G  A LNFPE
Sbjct: 45  FRGVRMRQWGKWVSEIREPK--KKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPE 104

Query: 68  LRHTLPKFPPDATVRKIRALARGAA 93
           L + LP+ P  A  + I+A A  AA
Sbjct: 105 LAYHLPR-PASADPKDIQAAAAAAA 126

[Close]
BLAST of CSPI04G02240 vs. NCBI nr
Match: gi|449469228|ref|XP_004152323.1| (PREDICTED: ethylene-responsive transcription factor ERF021-like [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 3.9e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 60
           MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK
Sbjct: 1   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 60

Query: 61  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 120
           ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ
Sbjct: 61  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 120

Query: 121 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 165
           SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH
Sbjct: 121 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 164

[Close]
BLAST of CSPI04G02240 vs. NCBI nr
Match: gi|700197802|gb|KGN52960.1| (hypothetical protein Csa_4G007650 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 3.9e-92
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 60
           MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK
Sbjct: 16  MGDPLKRYRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPK 75

Query: 61  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 120
           ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ
Sbjct: 76  ARLNFPELRHTLPKFPPDATVRKIRALARGAAEGSHGGGGGSSISGVTEPIQSLEEWQIQ 135

Query: 121 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 165
           SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH
Sbjct: 136 SLEKMPIYSPLLHQTMMEDDTSGFDLYGGDTYDTSIDLWNDQMH 179

[Close]
BLAST of CSPI04G02240 vs. NCBI nr
Match: gi|223525855|gb|EEF28287.1| (DNA binding protein, putative [Ricinus communis])

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 70/151 (46.36%), Postives = 85/151 (56.29%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAATAYD  A +F G +A+LNFP 
Sbjct: 43  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 102

Query: 68  LRHTLPKFPPDATVRKIRALARGAA-----------EGSHGGGGG-----SSISGVTEPI 127
           L H LP  P       IR  A  AA           EGS+GGGGG      S S V  PI
Sbjct: 103 LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 162

Query: 128 Q-SLEEWQIQSLEKMPIYSPLLHQTM--MED 140
              L   +IQ++ + P+ SP +   M  MED
Sbjct: 163 TVRLSPREIQAINESPLDSPKMWMQMATMED 190

[Close]
BLAST of CSPI04G02240 vs. NCBI nr
Match: gi|743922187|ref|XP_011005172.1| (PREDICTED: ethylene-responsive transcription factor ERF021-like [Populus euphratica])

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 64/139 (46.04%), Postives = 80/139 (57.55%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAA AYD  A  F G  ARLNFP+
Sbjct: 16  YRGVRKRKWGKWVSEIREP--GKKNRIWLGSFETPEMAAAAYDVAALHFRGHDARLNFPD 75

Query: 68  LRHTLPKFPPDATVRKIRALARGA--------AEGSHGGGGGSSISGVTEPIQSLEEWQI 127
           L H LPK P  ++   IR  A  A        AE SHGG   S++  +T     L   QI
Sbjct: 76  LVHNLPK-PTSSSSEDIRMAAHEAAMSLRPFTAESSHGGSSTSNVGPIT---VRLSASQI 135

Query: 128 QSLEKMPIYSPLLHQTMME 139
           Q++ + P+ SP +   M E
Sbjct: 136 QAINESPLDSPKMWMQMSE 148

[Close]
BLAST of CSPI04G02240 vs. NCBI nr
Match: gi|1000937830|ref|XP_002534096.2| (PREDICTED: ethylene-responsive transcription factor ERF021 [Ricinus communis])

HSP 1 Score: 105.9 bits (263), Expect = 6.8e-20
Identity = 70/151 (46.36%), Postives = 85/151 (56.29%), Query Frame = 1 

Query: 8   YRGVRKRGWGKCTSAIYYPKQGKQKQLWIGSFDTPEMAATAYDAVANFFHGPKARLNFPE 67
           YRGVRKR WGK  S I  P  GK+ ++W+GSF+TPEMAATAYD  A +F G +A+LNFP 
Sbjct: 17  YRGVRKRKWGKWVSEIREP--GKKTRIWLGSFETPEMAATAYDVAALYFRGREAKLNFPH 76

Query: 68  LRHTLPKFPPDATVRKIRALARGAA-----------EGSHGGGGG-----SSISGVTEPI 127
           L H LP  P       IR  A  AA           EGS+GGGGG      S S V  PI
Sbjct: 77  LVHDLPN-PASPNADDIRMAAHEAALRLRSLPIPEREGSNGGGGGGSGGSGSSSSVVGPI 136

Query: 128 Q-SLEEWQIQSLEKMPIYSPLLHQTM--MED 140
              L   +IQ++ + P+ SP +   M  MED
Sbjct: 137 TVRLSPREIQAINESPLDSPKMWMQMATMED 164

The following BLAST results are available for this feature:
BLAST of CSPI04G02240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF21_ARATH8.3e-1843.07Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF22_ARATH1.6e-1336.00Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF02... [more]
RA213_ARATH2.8e-1346.15Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana GN=RAP2... [more]
ERF23_ARATH2.8e-1350.59Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF02... [more]
ERF38_ARATH1.4e-1248.24Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana GN=ERF03... [more]
BLAST of CSPI04G02240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTL4_CUCSA2.7e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G007650 PE=4 SV=1[more]
B9T777_RICCO4.7e-2046.36DNA binding protein, putative OS=Ricinus communis GN=RCOM_0168650 PE=4 SV=1[more]
B9IQB6_POPTR1.8e-1945.32Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s10420g PE=4 SV=1[more]
B9MWI0_POPTR3.1e-1941.10AP2 domain-containing transcription factor family protein OS=Populus trichocarpa... [more]
A0A061FJ37_THECC2.6e-1841.52Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_036269 ... [more]
BLAST of CSPI04G02240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G71450.14.7e-1943.07 Integrase-type DNA-binding superfamily protein[more]
AT1G33760.19.1e-1536.00 Integrase-type DNA-binding superfamily protein[more]
AT1G22190.11.6e-1446.15 Integrase-type DNA-binding superfamily protein[more]
AT1G01250.11.6e-1450.59 Integrase-type DNA-binding superfamily protein[more]
AT2G35700.17.7e-1448.24 ERF family protein 38[more]
BLAST of CSPI04G02240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469228|ref|XP_004152323.1|3.9e-92100.00PREDICTED: ethylene-responsive transcription factor ERF021-like [Cucumis sativus... [more]
gi|700197802|gb|KGN52960.1|3.9e-92100.00hypothetical protein Csa_4G007650 [Cucumis sativus][more]
gi|223525855|gb|EEF28287.1|6.8e-2046.36DNA binding protein, putative [Ricinus communis][more]
gi|743922187|ref|XP_011005172.1|6.8e-2046.04PREDICTED: ethylene-responsive transcription factor ERF021-like [Populus euphrat... [more]
gi|1000937830|ref|XP_002534096.2|6.8e-2046.36PREDICTED: ethylene-responsive transcription factor ERF021 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G02240.1CSPI04G02240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 8..19
score: 2.1E-7coord: 32..48
score: 2.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 7..67
score: 1.4
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 7..58
score: 2.
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 7..72
score: 1.7
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 7..66
score: 18
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 7..67
score: 1.05
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 8..162
score: 1.7
NoneNo IPR availablePANTHERPTHR31985:SF17ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021coord: 8..162
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G02240Melon (DHL92) v3.5.1cpimeB310
CSPI04G02240Watermelon (Charleston Gray)cpiwcgB343
CSPI04G02240Watermelon (97103) v1cpiwmB307
CSPI04G02240Cucurbita pepo (Zucchini)cpecpiB617
CSPI04G02240Cucurbita pepo (Zucchini)cpecpiB871
CSPI04G02240Bottle gourd (USVL1VR-Ls)cpilsiB311
CSPI04G02240Melon (DHL92) v3.6.1cpimedB301
CSPI04G02240Cucumber (Gy14) v2cgybcpiB168
CSPI04G02240Silver-seed gourdcarcpiB0133
CSPI04G02240Silver-seed gourdcarcpiB0730
CSPI04G02240Cucumber (Chinese Long) v3cpicucB213
CSPI04G02240Watermelon (97103) v2cpiwmbB333
CSPI04G02240Wax gourdcpiwgoB368
CSPI04G02240Cucurbita moschata (Rifu)cmocpiB250
CSPI04G02240Cucumber (Gy14) v1cgycpiB103
CSPI04G02240Cucurbita maxima (Rimu)cmacpiB263
CSPI04G02240Cucurbita maxima (Rimu)cmacpiB850
CSPI04G02240Cucurbita moschata (Rifu)cmocpiB833
CSPI04G02240Cucumber (Chinese Long) v2cpicuB182