CSPI03G44960 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G44960
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationChr3 : 38507387 .. 38509656 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGCTCGAACGGCCATTACACATTCTAAGCATTGCATCAGGAACTCGGGAGCAAACAATGGCGTCCACGGGGAAAAGGGTTTTGGCATTGGCCAGAAATGTTTCCCTCAGTGTTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCAATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTCCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGCTCTCGTTACGTCTCTTATATCTTCTTCAATGCTCAAGAAGGCTCAGCTGGTAACTCTCCCTATTCTCTCTTTTTTCTCTATTGTTGTCTGTTTTGTTGATTGTTGAATGTTGAATGAATTTAGGGTAAGAAAAGCTATGGATTCTGTGTGTTAGTTGGTGGTATCTAAATTGGAGGGATTATGTAACTTTTTTTTCCTTAAAAAAAATTCATCATCAATGTGAAGGGACTTATACAAACTCTGGAATGGAATTGGAATCAGTAAATGAAAGCAATAAATAAAGAATAAAGATAAAAAGCATTTCGTCTAAGACGTTAAACTTGTGAAGAGAATTAAATCAATGACTTAGAAGGAGAACACCCTAGCGGAAGCAAAGCTATTGGAGCTTGATATGAAAGATCCTTTGATTTCTTTTAAACTATCACTCAGAGTGAAATGCTTTAACGAGAAAAGAGAAAGATCATTAAAGATGGATTTTGGAGCCAAAGATGGAATGATAAGCAATTACAAGCACATAAATATTTGGATAGAGAACTCCTAGAAGAAAGCTTTCAGACTTGCAGATTCAAAGAGCTCAAGGTAAGGAAAAGATTTGAAGAGATTATGTAACTTGAACTTGCATAATTCCTTAATGATTCTTTAACCATTTAAGAATCACTATCAGTGAGGATTGATAGTGATTCTAAAATGGTTAAAAGTACTTTCTTCATCTTCTAAATCATTCCTAAGACAGTGTAAAATCAAACATTAAATTGAATTTAAATGACTGAAGGCATGTGTTTGAGTGATTTTGAACATATAACAATGTTAGACAGACTGATTTTGCTTCCAAACACACCCTTGCTATCAACTGAATAATGTTCTGTAGGAACTGGTTTCATGTTTTCAACTGTCTTTTTCTTCCAATGGCTTCAGTGATTGGCAAGTTTATCTTTGAGCTATCATGGTATCTCGTGATTAACCTTTTTCTGGGGGTTTATCAGGTTTTGGAATGGAAATTGGAGAATATGAGCAAAAAAAATGAGAGAGATCTTGATTTCTACATCAACCTGATATGTCTATGCGGAAAGCTTAGAAATTCCTCTCTTGCAATGCGTGTCTTCAATGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCAATAATATGATAACTGCCTTTAGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAACACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCATTTGAATTCTCTCCCGACCTTCGAACCTACGAAGCTCTTATACATGGTAGTGTGAAATCGAACTGCTTTGATTTTGGTGTCAAATGTTTTGAGGAAATGATCTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAGGGGCTCTGTAAAAGGAAAAATTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAATGGATGGGAGATCGATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGCTAAATAAGTGGAATTAGGCTTTCGATGACAATGTATAGTCAGTCATAAGTAGAATGATAACAATGTATATCCCATGTCCAATACAATATTCTGCTTTGTCTTAGGGAGTTGGAAACCCTGGATTGCTTGTTTTTGCATTATGAGTTTGCTTTTCTAAAGGGTAGTGTATTCATTTTAGTACTTTTGAGGTGGCTACCCTCTATAAGAAAATTTATGAATGGTGATAAACGGTCTTGATGGTCGAAGTTCATGTGAAAGAGGCAAAATCCTTTGGAGATGTGCGACTCATGCGCTTTTGTGGTCATTTTTTGGAAAATAGAGGAATACTAAG

mRNA sequence

ATGGCGTCCACGGGGAAAAGGGTTTTGGCATTGGCCAGAAATGTTTCCCTCAGTGTTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCAATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTCCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGCTCTCGTTACGTCTCTTATATCTTCTTCAATGCTCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAATATGAGCAAAAAAAATGAGAGAGATCTTGATTTCTACATCAACCTGATATGTCTATGCGGAAAGCTTAGAAATTCCTCTCTTGCAATGCGTGTCTTCAATGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCAATAATATGATAACTGCCTTTAGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAACACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCATTTGAATTCTCTCCCGACCTTCGAACCTACGAAGCTCTTATACATGGTAGTGTGAAATCGAACTGCTTTGATTTTGGTGTCAAATGTTTTGAGGAAATGATCTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAGGGGCTCTGTAAAAGGAAAAATTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAATGGATGGGAGATCGATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGCTAAATAAGTGGAATTAG

Coding sequence (CDS)

ATGGCGTCCACGGGGAAAAGGGTTTTGGCATTGGCCAGAAATGTTTCCCTCAGTGTTCCACTTCAGTCACAGCAACCTCATTATCCACTTATTTTCCGGGGATTCTTCTCCACTGATCCTTCAATTTCCATTACGAATCCTCTGCTTCTCAAATTGCTCCAGGAGCCAACTTCGTCTGTCAAATCCGTGCTCGATTCCCAGGAAAATGGTTTTCTCTGTAGCTCCCGTCTTTCCTTGAATGCTCTCGTTACGTCTCTTATATCTTCTTCAATGCTCAAGAAGGCTCAGCTGGTTTTGGAATGGAAATTGGAGAATATGAGCAAAAAAAATGAGAGAGATCTTGATTTCTACATCAACCTGATATGTCTATGCGGAAAGCTTAGAAATTCCTCTCTTGCAATGCGTGTCTTCAATGTTATGGAATTTCAAGGAGTTAAACCCACGGTGACTGCTTTCAATTCACTTATAGAGGCTTGTATATCTTCCAATAATATGATAACTGCCTTTAGCATATTTGAAGTAATGAAAAACTCCAAAAATTTTAAACCCAACACTGACACTTTCTATTATTTCATTTCTGCATTCGCCAAATTGCACGATGTCAACTCTATGCAAGCATGGTATTCAGCCAAAAAAGCATTTGAATTCTCTCCCGACCTTCGAACCTACGAAGCTCTTATACATGGTAGTGTGAAATCGAACTGCTTTGATTTTGGTGTCAAATGTTTTGAGGAAATGATCTTATCTGACATTGTACCCAACACAATCATATTGGAGAATATGCTTGAGGGGCTCTGTAAAAGGAAAAATTTTGATGAAGTGAAGAAGTTCCTAAATGTTGTGCTTGACAATGGATGGGAGATCGATTGGAATGTGGTTGAGAAATTCATTCCAGTATGGTTTGAATCTGGGGAGTTGGAAGGGATGAAGGAGATCCTTACTAAGCTAAATAAGTGGAATTAG
Homology
[Close]
BLAST of CSPI03G44960 vs. Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-14
Identity = 57/215 (26.51%), Postives = 92/215 (42.79%), Query Frame = 1 

Query: 103 LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACIS 162
           L+ M K K E D+  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 163 SNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I AF K   +   +  Y         PD+ 
Sbjct: 303 YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 223 TYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G    +  D     FE MI  D  PN +    +++G CK K  +E  +    +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 283 LDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL 317
              G   +       I   F++G+ +  ++I  K+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

[Close]
BLAST of CSPI03G44960 vs. Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.3e-14
Identity = 52/239 (21.76%), Postives = 99/239 (41.42%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNV 139
           NAL+  L      K A  ++   +E     N       IN++C  G++    LA      
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLH 199
           M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D  V  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK 319
           NM+E LC+   F E +  + ++              FI    ++G L+  +++  ++ +
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

[Close]
BLAST of CSPI03G44960 vs. Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.2e-13
Identity = 55/196 (28.06%), Postives = 85/196 (43.37%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSK--KNERDLDFYINLICLCGKLRNSSLAMRVF 139
           N +   ++ + + K+  + L + L N  +  K E ++  Y  +I    K R+   A+ +F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 140 NVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAK 199
             ME +GV+P V  ++SLI    +      A  +   M   K   PN  TF   I AF K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVK 343

Query: 200 LHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTII 259
              +   +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN + 
Sbjct: 344 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 403

Query: 260 LENMLEGLCKRKNFDE 274
              ++ G CK K  DE
Sbjct: 404 YNTLINGFCKAKRIDE 418

[Close]
BLAST of CSPI03G44960 vs. Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.9e-12
Identity = 55/239 (23.01%), Postives = 98/239 (41.00%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSK--KNERDLDFYINLICLCGKLRNSSLAMRVF 139
           N +   ++ + + K+    L   L N  +  K E D+  +  +I    K R+   A+ +F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 140 NVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAK 199
             ME +G++P V  ++SLI    S      A  +   M   K   PN  TF   I AF K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVK 343

Query: 200 LHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTII 259
                  +  Y         PD+ TY +L++G    +  D   + FE M+  D  P+ + 
Sbjct: 344 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 403

Query: 260 LENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL 317
              +++G CK K  ++  +    +   G   D       I   F  G+ +  +++  ++
Sbjct: 404 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461

[Close]
BLAST of CSPI03G44960 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.8e-12
Identity = 48/165 (29.09%), Postives = 71/165 (43.03%), Query Frame = 1 

Query: 109 KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITA 168
           K E  +  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +      A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310

Query: 169 FSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIH 228
             +   M   K   PN  TF   I AF K   +   +  Y         PD+ TY +LI+
Sbjct: 311 SRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 370

Query: 229 GSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE 274
           G    +  D     FE MI  D  PN +    +++G CK K  DE
Sbjct: 371 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

[Close]
BLAST of CSPI03G44960 vs. TrEMBL
Match: A0A0A0LJI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889090 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 5.7e-179
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1 

Query: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120
           KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180
           ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240
           FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300
           KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKLNKWN 321
           FESGELEGMKEILTKLNKWN
Sbjct: 301 FESGELEGMKEILTKLNKWN 320

[Close]
BLAST of CSPI03G44960 vs. TrEMBL
Match: M5XI57_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014751mg PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.9e-71
Identity = 142/279 (50.90%), Postives = 199/279 (71.33%), Query Frame = 1 

Query: 42  ISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEW 101
           +S    LL +L++EP S +KS+L S+E   L SS  S   L+TSL SSS   K++LVLEW
Sbjct: 30  LSNQTSLLQRLVEEPNSRIKSILGSEEFSALQSSDFSWETLLTSLASSSSPDKSRLVLEW 89

Query: 102 KLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACIS 161
           KLEN+ ++NE+D D Y  LI LCGK++N  LAM+VF  M   G+KPT   FNSL+ AC S
Sbjct: 90  KLENLLEENEKDHDRYSELISLCGKIQNLPLAMQVFTSMGANGIKPTSAIFNSLVHACFS 149

Query: 162 SNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLR 221
           S N++T FS+FE+M++S+ FKPN+DT+  F+SAF+KL   +S+QAWYSAKKA  FS D++
Sbjct: 150 SGNVLTTFSLFEIMESSEGFKPNSDTYDAFMSAFSKLGKADSVQAWYSAKKAAGFSSDVQ 209

Query: 222 TYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVV 281
           TY+ LI G +KSN F      +EEM+LS ++PN  ILENMLEGLCKR++FD+VK+F+ +V
Sbjct: 210 TYQTLISGCIKSNNFKLADWFYEEMVLSGLMPNLPILENMLEGLCKRRSFDQVKEFMKIV 269

Query: 282 LDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNKWN 321
           LD GW+I+  + E  + ++ E   +E ++E+L  L + N
Sbjct: 270 LDAGWKINEKMAEMVVGLYIELRMVEKLEELLVDLMETN 308

[Close]
BLAST of CSPI03G44960 vs. TrEMBL
Match: D7SUE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03870 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.0e-66
Identity = 146/307 (47.56%), Postives = 207/307 (67.43%), Query Frame = 1 

Query: 17  LSVPLQSQQPHYPLI---FRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLC 76
           LSV  +  +P   LI    +  F   P +S  NPLL+KLLQE  S +K+VLDS++N    
Sbjct: 8   LSVAKRGLRPRLVLIPCRSQRLFCDKPLVS--NPLLIKLLQESISRIKTVLDSEDNFTFK 67

Query: 77  SSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLA 136
           SS  S + L+T+L SSS  K A LVLEW+LE M + NERDL  Y+ LI LC K++N   A
Sbjct: 68  SSDFSWDILLTTLKSSSPAK-AHLVLEWRLEKMVRDNERDLVPYLELIFLCSKVQNVPFA 127

Query: 137 MRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFIS 196
           MRVFN ME  G+K T + FN+LI  C+SS N++TA S+FE+M++S+N KPN++T+  FIS
Sbjct: 128 MRVFNSMEAHGIKLTSSVFNALIYTCLSSGNVMTALSLFEIMQSSENCKPNSETYNTFIS 187

Query: 197 AFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVP 256
            ++ L +  +MQAWY A+K   FS DLRTYE+LI G V+S  FD   + +EEM+LS I+P
Sbjct: 188 VYSNLGNDKAMQAWYLAQKGAGFSADLRTYESLISGCVRSRNFDCADRFYEEMMLSGIMP 247

Query: 257 NTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEIL 316
           N  ILEN+L GLC++++  +V++ L  ++D  WEI+ ++ EK + ++FE G +E M+E+L
Sbjct: 248 NGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVEKMEELL 307

Query: 317 TKLNKWN 321
             L   N
Sbjct: 308 LNLMNSN 311

[Close]
BLAST of CSPI03G44960 vs. TrEMBL
Match: A5BLD0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033964 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-65
Identity = 143/312 (45.83%), Postives = 209/312 (66.99%), Query Frame = 1 

Query: 9    LALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQE 68
            L+L+  +++ +P +SQ+          F   P +S  NPLL+KLLQE  S +K+VLDS++
Sbjct: 923  LSLSAQLNIGIPQRSQR---------LFCDKPLVS--NPLLIKLLQESISRIKTVLDSED 982

Query: 69   NGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLR 128
            N    SS  S + L+T+L SSS  K A LVLEW+LE M + NERDL  Y+ LI LC K++
Sbjct: 983  NFTFKSSDFSWDILLTTLKSSSPAK-AHLVLEWRLEKMVRDNERDLVPYLELIFLCSKVQ 1042

Query: 129  NSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTF 188
            N   AMRVFN ME  G+K T + FN+LI  C+SS N++TA S+FE+M++S+N KPN++T+
Sbjct: 1043 NVPFAMRVFNSMEAHGIKLTSSVFNALICTCLSSGNVMTALSLFEIMQSSENCKPNSETY 1102

Query: 189  YYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMIL 248
              FIS ++ L +  +MQAWY A K   FS DLRTYE+LI G  +S  FD   + +EEM+L
Sbjct: 1103 NTFISVYSNLGNDKAMQAWYLAXKGAGFSADLRTYESLISGCXRSRNFDCADRFYEEMML 1162

Query: 249  SDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEG 308
            S I+P+  ILEN+L GLC++++  +V++ L  ++D  WEI+ ++ EK + ++FE G +E 
Sbjct: 1163 SGIMPBGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLYFEHGTVEK 1222

Query: 309  MKEILTKLNKWN 321
            M+E+L  L   N
Sbjct: 1223 MEELLLNLMNSN 1222

[Close]
BLAST of CSPI03G44960 vs. TrEMBL
Match: A0A0B2P128_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=glysoja_049516 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.3e-63
Identity = 134/282 (47.52%), Postives = 193/282 (68.44%), Query Frame = 1 

Query: 37  STDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQ 96
           S   S S +NPLLLKLLQ P S +K+ LD QE   L SS+ S + L+TSL  SS   KA+
Sbjct: 30  SNSNSHSNSNPLLLKLLQVPNSHIKTTLD-QEMASLQSSQRSWDFLITSLSPSSS-DKAR 89

Query: 97  LVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLI 156
           L+LEW LE M K+NE+D D +  LI LCGK+++  L MRVF+ ME  GVKP    FNSLI
Sbjct: 90  LILEWILEKMLKENEKDRDLFSELIFLCGKVKDVMLGMRVFSSMEATGVKPNSLVFNSLI 149

Query: 157 EACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEF 216
             C+SS++++TA S+FE+M++S+++KP+  T+  FISAF+K  +V++M AWYSAKKA   
Sbjct: 150 SVCLSSHDIVTAVSLFEIMESSESYKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAARL 209

Query: 217 SPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKK 276
            PDL+ +E+LI G V S  F    + FEEM++S IVP+  I+E+ML G+CK+K     ++
Sbjct: 210 GPDLQMFESLISGCVNSRKFKIADRIFEEMMISGIVPSASIIESMLNGICKQKRLGRAEE 269

Query: 277 FLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK 319
           F    +D+GWEI+ N+V+K + ++ + G+ E M+ +L  + K
Sbjct: 270 FFTFAMDSGWEINENMVDKLVAMYLQLGKAEEMEGLLKTMMK 309

[Close]
BLAST of CSPI03G44960 vs. TAIR10
Match: AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-15
Identity = 57/215 (26.51%), Postives = 92/215 (42.79%), Query Frame = 1 

Query: 103 LENMSK-KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACIS 162
           L+ M K K E D+  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 163 SNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLR 222
                 A  +   M   K   PN  TF   I AF K   +   +  Y         PD+ 
Sbjct: 303 YGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 223 TYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVV 282
           TY +LI+G    +  D     FE MI  D  PN +    +++G CK K  +E  +    +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 283 LDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL 317
              G   +       I   F++G+ +  ++I  K+
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456

[Close]
BLAST of CSPI03G44960 vs. TAIR10
Match: AT3G48810.1 (AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-15
Identity = 52/239 (21.76%), Postives = 99/239 (41.42%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNV 139
           NAL+  L      K A  ++   +E     N       IN++C  G++    LA      
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE---LAFSFLTQ 309

Query: 140 MEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLH 199
           M  +G  P +   +SL++ C        A  ++  M      +PN   +   +  F    
Sbjct: 310 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 369

Query: 200 DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILE 259
           ++    + +S  +    SP++RTY +LI+G  K    D  V  + +M+ S   PN ++  
Sbjct: 370 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 429

Query: 260 NMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNK 319
           NM+E LC+   F E +  + ++              FI    ++G L+  +++  ++ +
Sbjct: 430 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485

[Close]
BLAST of CSPI03G44960 vs. TAIR10
Match: AT1G63400.1 (AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 5.2e-14
Identity = 55/196 (28.06%), Postives = 85/196 (43.37%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSK--KNERDLDFYINLICLCGKLRNSSLAMRVF 139
           N +   ++ + + K+  + L + L N  +  K E ++  Y  +I    K R+   A+ +F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283

Query: 140 NVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAK 199
             ME +GV+P V  ++SLI    +      A  +   M   K   PN  TF   I AF K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVK 343

Query: 200 LHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTII 259
              +   +  Y         PD+ TY +LI+G    +  D     FE MI  D  PN + 
Sbjct: 344 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 403

Query: 260 LENMLEGLCKRKNFDE 274
              ++ G CK K  DE
Sbjct: 404 YNTLINGFCKAKRIDE 418

[Close]
BLAST of CSPI03G44960 vs. TAIR10
Match: AT1G62590.1 (AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13
Identity = 55/239 (23.01%), Postives = 98/239 (41.00%), Query Frame = 1 

Query: 80  NALVTSLISSSMLKKAQLVLEWKLENMSK--KNERDLDFYINLICLCGKLRNSSLAMRVF 139
           N +   ++ + + K+    L   L N  +  K E D+  +  +I    K R+   A+ +F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283

Query: 140 NVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAK 199
             ME +G++P V  ++SLI    S      A  +   M   K   PN  TF   I AF K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVK 343

Query: 200 LHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTII 259
                  +  Y         PD+ TY +L++G    +  D   + FE M+  D  P+ + 
Sbjct: 344 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 403

Query: 260 LENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKL 317
              +++G CK K  ++  +    +   G   D       I   F  G+ +  +++  ++
Sbjct: 404 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461

[Close]
BLAST of CSPI03G44960 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 4.4e-13
Identity = 48/165 (29.09%), Postives = 71/165 (43.03%), Query Frame = 1 

Query: 109 KNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITA 168
           K E  +  Y  +I      +N + A+ +F  M+ +G++P V  +NSLI    +      A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310

Query: 169 FSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIH 228
             +   M   K   PN  TF   I AF K   +   +  Y         PD+ TY +LI+
Sbjct: 311 SRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 370

Query: 229 GSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDE 274
           G    +  D     FE MI  D  PN +    +++G CK K  DE
Sbjct: 371 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414

[Close]
BLAST of CSPI03G44960 vs. NCBI nr
Match: gi|449437306|ref|XP_004136433.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 634.8 bits (1636), Expect = 8.2e-179
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1 

Query: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120
           KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120

Query: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180
           ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN
Sbjct: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240
           FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV
Sbjct: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240

Query: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300
           KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW
Sbjct: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKLNKWN 321
           FESGELEGMKEILTKLNKWN
Sbjct: 301 FESGELEGMKEILTKLNKWN 320

[Close]
BLAST of CSPI03G44960 vs. NCBI nr
Match: gi|659132534|ref|XP_008466249.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g31840 [Cucumis melo])

HSP 1 Score: 576.6 bits (1485), Expect = 2.6e-161
Identity = 293/320 (91.56%), Postives = 301/320 (94.06%), Query Frame = 1 

Query: 1   MASTGKRVLALARNVSLSVPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60
           MASTGKRVL LARNVS S+PLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV
Sbjct: 1   MASTGKRVLTLARNVSFSIPLQSQQPHYPLIFRGFFSTDPSISITNPLLLKLLQEPTSSV 60

Query: 61  KSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEWKLENMSKKNERDLDFYINL 120
           KSVLDSQENGFLCSSRLSLN LVTSLISSS  KKAQLVLEWKLE MSK+NE D D YINL
Sbjct: 61  KSVLDSQENGFLCSSRLSLNDLVTSLISSSKPKKAQLVLEWKLEKMSKRNESDPDLYINL 120

Query: 121 ICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACISSNNMITAFSIFEVMKNSKN 180
           I LCGKLR+S LAMRVF VMEFQGVKPTVTAFNSLIEACISS+NMITAF IFEVMKNSKN
Sbjct: 121 IRLCGKLRDSFLAMRVFTVMEFQGVKPTVTAFNSLIEACISSHNMITAFGIFEVMKNSKN 180

Query: 181 FKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSNCFDFGV 240
           FKPNTDTFYYFIS F+KL DVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKS CFDF V
Sbjct: 181 FKPNTDTFYYFISEFSKLRDVNSMQAWYSAKKAFEFSPDLRTYEALIHGSVKSKCFDFAV 240

Query: 241 KCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEIDWNVVEKFIPVW 300
           KCFEEM+LSDIVPN IILENMLEGLCKRKNFDEVKKFLNVVLDNGWEI+WNVVEKFIPVW
Sbjct: 241 KCFEEMMLSDIVPNAIILENMLEGLCKRKNFDEVKKFLNVVLDNGWEINWNVVEKFIPVW 300

Query: 301 FESGELEGMKEILTKLNKWN 321
           FESGELEGMKEILTK+NK N
Sbjct: 301 FESGELEGMKEILTKINKSN 320

[Close]
BLAST of CSPI03G44960 vs. NCBI nr
Match: gi|645226410|ref|XP_008220025.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860-like [Prunus mume])

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 145/279 (51.97%), Postives = 201/279 (72.04%), Query Frame = 1 

Query: 42  ISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEW 101
           +S    LL +L++EP S +KS+L S+E   L SS  S   L+TSL SSS   K++LVLEW
Sbjct: 30  LSNQTSLLQRLVEEPNSRIKSILGSEEFSALQSSDFSWETLLTSLASSSSPDKSRLVLEW 89

Query: 102 KLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACIS 161
           KLEN+ ++NE+D D Y  LI LCGK++N  LAM+VF  ME  G+KPT   FNSL+ AC S
Sbjct: 90  KLENLLEENEKDHDRYSELISLCGKIQNLPLAMQVFTSMEANGIKPTSAIFNSLVHACFS 149

Query: 162 SNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLR 221
           S N+ TAFS+FE+M++S+ FKPN+DT+  F+SAF+KL   +S+QAWYSAKKA  FS D++
Sbjct: 150 SGNVSTAFSLFEIMESSEGFKPNSDTYDAFMSAFSKLGKADSVQAWYSAKKAAGFSSDVQ 209

Query: 222 TYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVV 281
           TY+ LI G +KSN F      +EEM+LS ++PN  ILENMLEGLCKR++FD+VK+F+ +V
Sbjct: 210 TYQTLISGCIKSNNFKLADWFYEEMVLSGLMPNLPILENMLEGLCKRRSFDQVKEFMKIV 269

Query: 282 LDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNKWN 321
           LD GW+I+  + E  + ++ E G +E ++E+L  L + N
Sbjct: 270 LDAGWKINEKMAEMVVGLYIELGMVEKLEELLVDLMETN 308

[Close]
BLAST of CSPI03G44960 vs. NCBI nr
Match: gi|1009135746|ref|XP_015885152.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like, partial [Ziziphus jujuba])

HSP 1 Score: 278.1 bits (710), Expect = 1.9e-71
Identity = 151/288 (52.43%), Postives = 202/288 (70.14%), Query Frame = 1 

Query: 35  FFSTDPSISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSM--L 94
           +  ++ S+S+T     +LLQEPTSS+K+ LDS     L  S+ +L  L++SL SSS   L
Sbjct: 1   YCDSNTSVSLTK----RLLQEPTSSIKTTLDSL---VLQPSQFTLETLLSSLTSSSSASL 60

Query: 95  KKAQLVLEWKLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAF 154
            KA LVLEW  E + K+NERD D Y  LI LCGK+RN  LAM +F  ME +G+KP  + F
Sbjct: 61  DKAHLVLEWSSEKLLKENERDHDKYSELIYLCGKIRNLPLAMNIFTSMEARGIKPNSSIF 120

Query: 155 NSLIEACISSNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKK 214
           NSLI  C SS NM TA S+FE+M++S+ FKPN+DT+  FIS F+KL +VN+MQAWYSAKK
Sbjct: 121 NSLIHVCFSSGNMATALSLFEIMQSSEGFKPNSDTYEAFISGFSKLGNVNAMQAWYSAKK 180

Query: 215 AFEFSPDLRTYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFD 274
           A  F+  L+TYE+LI G +KS  F+     F EMIL+  VPN+IIL++MLEGLCKR+N  
Sbjct: 181 AAGFAAQLQTYESLISGCIKSRNFETADGLFREMILTGFVPNSIILDSMLEGLCKRRNLV 240

Query: 275 EVKKFLNVVLDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNKWN 321
             KKFLN+V+D GW+I+  +VEK + ++FE G +E M+E+L  L + N
Sbjct: 241 GAKKFLNLVVDGGWDINELMVEKLVGLYFEVGNVEDMEELLATLMEAN 281

[Close]
BLAST of CSPI03G44960 vs. NCBI nr
Match: gi|596218353|ref|XP_007223987.1| (hypothetical protein PRUPE_ppa014751mg [Prunus persica])

HSP 1 Score: 276.6 bits (706), Expect = 5.7e-71
Identity = 142/279 (50.90%), Postives = 199/279 (71.33%), Query Frame = 1 

Query: 42  ISITNPLLLKLLQEPTSSVKSVLDSQENGFLCSSRLSLNALVTSLISSSMLKKAQLVLEW 101
           +S    LL +L++EP S +KS+L S+E   L SS  S   L+TSL SSS   K++LVLEW
Sbjct: 30  LSNQTSLLQRLVEEPNSRIKSILGSEEFSALQSSDFSWETLLTSLASSSSPDKSRLVLEW 89

Query: 102 KLENMSKKNERDLDFYINLICLCGKLRNSSLAMRVFNVMEFQGVKPTVTAFNSLIEACIS 161
           KLEN+ ++NE+D D Y  LI LCGK++N  LAM+VF  M   G+KPT   FNSL+ AC S
Sbjct: 90  KLENLLEENEKDHDRYSELISLCGKIQNLPLAMQVFTSMGANGIKPTSAIFNSLVHACFS 149

Query: 162 SNNMITAFSIFEVMKNSKNFKPNTDTFYYFISAFAKLHDVNSMQAWYSAKKAFEFSPDLR 221
           S N++T FS+FE+M++S+ FKPN+DT+  F+SAF+KL   +S+QAWYSAKKA  FS D++
Sbjct: 150 SGNVLTTFSLFEIMESSEGFKPNSDTYDAFMSAFSKLGKADSVQAWYSAKKAAGFSSDVQ 209

Query: 222 TYEALIHGSVKSNCFDFGVKCFEEMILSDIVPNTIILENMLEGLCKRKNFDEVKKFLNVV 281
           TY+ LI G +KSN F      +EEM+LS ++PN  ILENMLEGLCKR++FD+VK+F+ +V
Sbjct: 210 TYQTLISGCIKSNNFKLADWFYEEMVLSGLMPNLPILENMLEGLCKRRSFDQVKEFMKIV 269

Query: 282 LDNGWEIDWNVVEKFIPVWFESGELEGMKEILTKLNKWN 321
           LD GW+I+  + E  + ++ E   +E ++E+L  L + N
Sbjct: 270 LDAGWKINEKMAEMVVGLYIELRMVEKLEELLVDLMETN 308

The following BLAST results are available for this feature:
BLAST of CSPI03G44960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR96_ARATH3.7e-1426.51Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
PP270_ARATH6.3e-1421.76Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN... [more]
PP102_ARATH9.2e-1328.06Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN... [more]
PPR90_ARATH5.9e-1223.01Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN... [more]
PPR99_ARATH7.8e-1229.09Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
BLAST of CSPI03G44960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJI4_CUCSA5.7e-179100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G889090 PE=4 SV=1[more]
M5XI57_PRUPE3.9e-7150.90Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014751mg PE=4 SV=1[more]
D7SUE7_VITVI5.0e-6647.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03870 PE=4 SV=... [more]
A5BLD0_VITVI1.1e-6545.83Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033964 PE=4 SV=1[more]
A0A0B2P128_GLYSO2.3e-6347.52Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja GN=gl... [more]
BLAST of CSPI03G44960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G62930.12.1e-1526.51 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G48810.13.6e-1521.76 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63400.15.2e-1428.06 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62590.13.3e-1323.01 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G63130.14.4e-1329.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CSPI03G44960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437306|ref|XP_004136433.1|8.2e-179100.00PREDICTED: pentatricopeptide repeat-containing protein At1g12775, mitochondrial-... [more]
gi|659132534|ref|XP_008466249.1|2.6e-16191.56PREDICTED: putative pentatricopeptide repeat-containing protein At1g31840 [Cucum... [more]
gi|645226410|ref|XP_008220025.1|1.0e-7251.97PREDICTED: pentatricopeptide repeat-containing protein At5g02860-like [Prunus mu... [more]
gi|1009135746|ref|XP_015885152.1|1.9e-7152.43PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-... [more]
gi|596218353|ref|XP_007223987.1|5.7e-7150.90hypothetical protein PRUPE_ppa014751mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0015031 protein transport
biological_process GO:0008150 biological_process
cellular_component GO:0016020 membrane
cellular_component GO:0030117 membrane coat
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G44960.1CSPI03G44960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 151..185
score: 0.0013coord: 119..149
score: 8.9E-4coord: 222..255
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 219..253
score: 9.383coord: 148..178
score: 7.684coord: 184..218
score: 5.755coord: 113..147
score: 8.638coord: 254..288
score: 8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 80..316
score: 3.2
NoneNo IPR availablePANTHERPTHR24015:SF741SUBFAMILY NOT NAMEDcoord: 80..316
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G44960Cla023000Watermelon (97103) v1cpiwmB272
CSPI03G44960Csa3G889090Cucumber (Chinese Long) v2cpicuB120
CSPI03G44960MELO3C003586Melon (DHL92) v3.5.1cpimeB215
CSPI03G44960ClCG11G014000Watermelon (Charleston Gray)cpiwcgB201
CSPI03G44960Lsi04G022210Bottle gourd (USVL1VR-Ls)cpilsiB189
CSPI03G44960MELO3C003586.2Melon (DHL92) v3.6.1cpimedB209
CSPI03G44960CsaV3_3G047390Cucumber (Chinese Long) v3cpicucB145
CSPI03G44960Cla97C11G219970Watermelon (97103) v2cpiwmbB195
CSPI03G44960Bhi09G002047Wax gourdcpiwgoB343
CSPI03G44960Cucsa.311360Cucumber (Gy14) v1cgycpiB473
CSPI03G44960CmaCh09G005500Cucurbita maxima (Rimu)cmacpiB014
CSPI03G44960CmoCh09G005400Cucurbita moschata (Rifu)cmocpiB005
CSPI03G44960Cp4.1LG06g04550Cucurbita pepo (Zucchini)cpecpiB778
CSPI03G44960CsGy3G042440Cucumber (Gy14) v2cgybcpiB111
CSPI03G44960Carg02964Silver-seed gourdcarcpiB0665
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G44960Wax gourdcpiwgoB314
CSPI03G44960Wild cucumber (PI 183967)cpicpiB066
CSPI03G44960Cucumber (Gy14) v1cgycpiB243
CSPI03G44960Cucurbita maxima (Rimu)cmacpiB186
CSPI03G44960Cucurbita maxima (Rimu)cmacpiB448
CSPI03G44960Cucurbita maxima (Rimu)cmacpiB808
CSPI03G44960Cucurbita moschata (Rifu)cmocpiB171
CSPI03G44960Cucurbita moschata (Rifu)cmocpiB436
CSPI03G44960Cucurbita moschata (Rifu)cmocpiB793
CSPI03G44960Cucumber (Chinese Long) v2cpicuB115
CSPI03G44960Melon (DHL92) v3.5.1cpimeB193
CSPI03G44960Watermelon (Charleston Gray)cpiwcgB273
CSPI03G44960Watermelon (97103) v1cpiwmB210
CSPI03G44960Cucurbita pepo (Zucchini)cpecpiB110
CSPI03G44960Cucurbita pepo (Zucchini)cpecpiB559
CSPI03G44960Cucurbita pepo (Zucchini)cpecpiB830
CSPI03G44960Bottle gourd (USVL1VR-Ls)cpilsiB240
CSPI03G44960Melon (DHL92) v3.6.1cpimedB186
CSPI03G44960Cucumber (Gy14) v2cgybcpiB069
CSPI03G44960Silver-seed gourdcarcpiB0066
CSPI03G44960Silver-seed gourdcarcpiB1016
CSPI03G44960Cucumber (Chinese Long) v3cpicucB141
CSPI03G44960Watermelon (97103) v2cpiwmbB257